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CaUC10G192420 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G192420
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRNA/RNP complex-1-interacting phosphatase, putative
Genome locationCiama_Chr10:26982219..26982590
RNA-Seq ExpressionCaUC10G192420
SyntenyCaUC10G192420
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048367.1 putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa]4.4e-4881.75Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHRHFF   S SA V F NRSISPRSIA+LC H   PSDP+D S+EKTKKK+QERK+M+ GF QRFEKMGI+LKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQLW
        FAVYVYISQKIVCAYFLWMSMPK LW
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQLW

KAG6581569.1 hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4581.6Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCC--HPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSF
        MAALSAGHRHFF        V FGNRSISPR I LLCC  H  DPSDSSEEKTKK  QE KQM+PGF QR++KMG+ELKEKLSPQRKGDWKDVTLMSLSF
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCC--HPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSF

Query:  AVYVYISQKIVCAYFLWMSMPKQLW
        AVYVYISQKIVCAYFLWMSMPKQLW
Subjt:  AVYVYISQKIVCAYFLWMSMPKQLW

KAG6606884.1 hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4480.16Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHR+FF     SA V F NRSISPRSI LLC H   PSDPSD SEEK KK+ QE+KQ +PGF QRFEKMGIELKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQLW
        FAVYVYISQKIVCAYF+WMSMPKQ+W
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQLW

KGN58582.1 hypothetical protein Csa_001602 [Cucumis sativus]1.4e-4982.54Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHRHFF  QS SAT+LF NRSISPRSI++LC H   PSDP+D SEEKTKKK+QERK+M+ GF QRFEKMGI+LKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQLW
        FAVYVYISQKIVCAYFLWM+MPK LW
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQLW

XP_022152649.1 uncharacterized protein LOC111020315 [Momordica charantia]1.6e-3469.35Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAV
        MAALSAGHRHFF+ +  +A  L   RS SP+SI LLC H  DP   SEE +K+  + ++Q + GF +RFEKMG+ELKEKLSPQRKGDWKDV LMSLSFAV
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAV

Query:  YVYISQKIVCAYFLWMSMPK-QLW
        YVYISQKIVCAYF+WMSMPK QLW
Subjt:  YVYISQKIVCAYFLWMSMPK-QLW

TrEMBL top hitse value%identityAlignment
A0A0A0LD14 Uncharacterized protein6.6e-5082.54Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHRHFF  QS SAT+LF NRSISPRSI++LC H   PSDP+D SEEKTKKK+QERK+M+ GF QRFEKMGI+LKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQLW
        FAVYVYISQKIVCAYFLWM+MPK LW
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQLW

A0A5D3BX35 Putative RNA/RNP complex-1-interacting phosphatase2.1e-4881.75Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHRHFF   S SA V F NRSISPRSIA+LC H   PSDP+D S+EKTKKK+QERK+M+ GF QRFEKMGI+LKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCH---PSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQLW
        FAVYVYISQKIVCAYFLWMSMPK LW
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQLW

A0A660KVF0 Uncharacterized protein2.3e-2656.91Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAV
        MAALS GH    +P     T     +S SP ++ L CC    P DSS  +TKK+  +RK +L      FEK G  L+E LSP++KGDWKD+TLMSLSFAV
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAV

Query:  YVYISQKIVCAYFLWMSMPKQLW
        YVYISQK+VCAYF WMSMPKQLW
Subjt:  YVYISQKIVCAYFLWMSMPKQLW

A0A6J1DGN1 uncharacterized protein LOC1110203157.8e-3569.35Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAV
        MAALSAGHRHFF+ +  +A  L   RS SP+SI LLC H  DP   SEE +K+  + ++Q + GF +RFEKMG+ELKEKLSPQRKGDWKDV LMSLSFAV
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAV

Query:  YVYISQKIVCAYFLWMSMPK-QLW
        YVYISQKIVCAYF+WMSMPK QLW
Subjt:  YVYISQKIVCAYFLWMSMPK-QLW

A0A6P9E117 uncharacterized protein LOC1183445079.6e-2555.28Show/hide
Query:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAV
        MAAL  GH  +     R  T+    +  SPR+  LL C    P+D+S  +TKK+++ R+ +LPG    F K G  LKE +SPQ+KGDWKDV LMSLSFAV
Subjt:  MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAV

Query:  YVYISQKIVCAYFLWMSMPKQLW
        YVYISQKIVCAY  WMSMPKQ W
Subjt:  YVYISQKIVCAYFLWMSMPKQLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52070.1 unknown protein5.0e-1051.95Show/hide
Query:  RKQMLP----GFFQRFEKMGI----ELKEKLSPQ-RKGDWKDVTLMSLSFAVYVYISQKIVCAYFLW--MSMPKQLW
        RKQ LP    G  QR  +  I    ++ + L P+ +KGD KD+ LMSLSFAVYVYISQ +VCAYF W  +S PK  W
Subjt:  RKQMLP----GFFQRFEKMGI----ELKEKLSPQ-RKGDWKDVTLMSLSFAVYVYISQKIVCAYFLW--MSMPKQLW

AT3G52070.2 unknown protein4.3e-0952.7Show/hide
Query:  RKQMLP----GFFQRFEKMGI----ELKEKLSPQ-RKGDWKDVTLMSLSFAVYVYISQKIVCAYFLW--MSMPK
        RKQ LP    G  QR  +  I    ++ + L P+ +KGD KD+ LMSLSFAVYVYISQ +VCAYF W  +S PK
Subjt:  RKQMLP----GFFQRFEKMGI----ELKEKLSPQ-RKGDWKDVTLMSLSFAVYVYISQKIVCAYFLW--MSMPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCCAACCACAAAGCCGCAGCGCCACCGTGCTGTTCGGAAACAGAAGCATCAGCCCCAGATCCATCGCCCTCCTCTG
CTGCCATCCTTCAGATCCTTCAGATTCTTCAGAAGAAAAAACGAAGAAGAAAGCCCAAGAAAGAAAACAGATGCTTCCTGGGTTTTTCCAGAGATTTGAGAAGATGGGAA
TTGAATTGAAGGAGAAATTGAGTCCTCAAAGAAAGGGGGATTGGAAGGATGTGACACTGATGAGCCTTTCATTTGCTGTTTATGTATATATATCTCAGAAGATTGTTTGT
GCTTATTTTCTTTGGATGTCAATGCCGAAACAACTGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCCAACCACAAAGCCGCAGCGCCACCGTGCTGTTCGGAAACAGAAGCATCAGCCCCAGATCCATCGCCCTCCTCTG
CTGCCATCCTTCAGATCCTTCAGATTCTTCAGAAGAAAAAACGAAGAAGAAAGCCCAAGAAAGAAAACAGATGCTTCCTGGGTTTTTCCAGAGATTTGAGAAGATGGGAA
TTGAATTGAAGGAGAAATTGAGTCCTCAAAGAAAGGGGGATTGGAAGGATGTGACACTGATGAGCCTTTCATTTGCTGTTTATGTATATATATCTCAGAAGATTGTTTGT
GCTTATTTTCTTTGGATGTCAATGCCGAAACAACTGTGGTAG
Protein sequenceShow/hide protein sequence
MAALSAGHRHFFQPQSRSATVLFGNRSISPRSIALLCCHPSDPSDSSEEKTKKKAQERKQMLPGFFQRFEKMGIELKEKLSPQRKGDWKDVTLMSLSFAVYVYISQKIVC
AYFLWMSMPKQLW