CuGenDBv2

Gene ID	CaUC10G192450
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Ribosomal protein S21 family protein isoform 1
Genome location	Ciama_Chr10:27014647..27015063
RNA-Seq Expression	CaUC10G192450
Synteny	CaUC10G192450
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001911 - Ribosomal protein S21

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0048381.1 Ribosomal protein S21 family protein isoform 1 [Cucumis melo var. makuwa]

5.1e-37

88.12

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV
        MNSLARNISCSIRSSIHTN LQ+QQWRGIRVKVL G L++AL  +QRKMQSSGIERLIKREQIHHIKNSEKRVLARK LE KIRSQDLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV

Query:  R
        R
Subjt:  R

KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-37

84.26

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTN LQH     QQWRGIRVKVLNGNL++AL F+QRKM+SSGIERLIKREQ HHIKNSEKRVLARKNLE KIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI

Query:  LIKKVRYL
        LIKKVR L
Subjt:  LIKKVRYL

XP_022934889.1 uncharacterized protein LOC111441929 [Cucurbita moschata]

1.0e-37

84.26

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTN LQH     QQWRGIRVKVLNGNL++AL F+QRKM+SSGIERLIKREQ HHIKNSEKRVLARKNLE KIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI

Query:  LIKKVRYL
        LIKKVR L
Subjt:  LIKKVRYL

XP_022982723.1 uncharacterized protein LOC111481507 [Cucurbita maxima]

1.3e-37

84.26

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTN L+H     QQWRGIRVKVLNGNL++AL F+QRKMQSSGIERLIKREQ HHIKNSEKRVLARKNLE KIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI

Query:  LIKKVRYL
        LIKKVR L
Subjt:  LIKKVRYL

XP_038903160.1 30S ribosomal protein S21 [Benincasa hispida]

2.2e-40

92.23

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV
        MNSLARNISCSIRSSIHTNYLQHQQ RGIRVKVLNGNL+QAL FM+RKMQ+SGIERLIKREQ HHIKNSEKRVLARKNLE KIRSQDLARKLKAILIKKV
Subjt:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV

Query:  RYL
        R L
Subjt:  RYL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCD1 Uncharacterized protein

1.2e-36

85.44

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV
        MNSLARNISCSIRSSI TN LQHQQWRGIRVKVL G L++AL  +QRKMQSSGIERLIKREQ+HHIKNSEKRVLARK LE KI+S+DLARKLKAILIKKV
Subjt:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV

Query:  RYL
        R L
Subjt:  RYL

A0A1S3CG17 uncharacterized protein LOC103500324

2.5e-37

88.12

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV
        MNSLARNISCSIRSSIHTN LQ+QQWRGIRVKVL G L++AL  +QRKMQSSGIERLIKREQIHHIKNSEKRVLARK LE KIRSQDLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV

Query:  R
        R
Subjt:  R

A0A5A7U491 Ribosomal protein S21 family protein isoform 1

2.5e-37

88.12

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV
        MNSLARNISCSIRSSIHTN LQ+QQWRGIRVKVL G L++AL  +QRKMQSSGIERLIKREQIHHIKNSEKRVLARK LE KIRSQDLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKV

Query:  R
        R
Subjt:  R

A0A6J1F3V2 uncharacterized protein LOC111441929

5.0e-38

84.26

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTN LQH     QQWRGIRVKVLNGNL++AL F+QRKM+SSGIERLIKREQ HHIKNSEKRVLARKNLE KIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI

Query:  LIKKVRYL
        LIKKVR L
Subjt:  LIKKVRYL

A0A6J1J5L6 uncharacterized protein LOC111481507

6.5e-38

84.26

Show/hide

Query:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+HTN L+H     QQWRGIRVKVLNGNL++AL F+QRKMQSSGIERLIKREQ HHIKNSEKRVLARKNLE KIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHTNYLQH-----QQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAI

Query:  LIKKVRYL
        LIKKVR L
Subjt:  LIKKVRYL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G26360.1 Ribosomal protein S21 family protein

2.0e-23

60.58

Show/hide

Query:  MNSLARNISCSI-RSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKK
        MN++A+ ++  + R S++    Q QQ RGIRVKV + +LD+AL  +Q+KMQSSG+ERLIK  Q HHIKNSEK+VLARKNLE +I+S D ARKL++ILIKK
Subjt:  MNSLARNISCSI-RSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKK

Query:  VRYL
        VR L
Subjt:  VRYL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATTCGTTGGCCCGGAACATATCATGCTCCATCAGATCTTCGATTCACACCAATTATCTGCAGCACCAGCAATGGAGGGGAATCCGAGTGAAGGTACTGAACGGGAA
TCTAGATCAGGCACTGAAATTTATGCAAAGGAAGATGCAATCGAGTGGAATCGAGCGACTGATTAAACGCGAACAGATTCATCATATCAAGAATTCCGAGAAACGAGTTT
TGGCCAGAAAGAATTTGGAGCACAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGCCATCCTTATAAAGAAAGTCAGGTATTTATATATCTTTTCTTTCAACAAT
AAGCTATTGGGTGATGATGCAATCGTTCGAATGGATGATCATACGGTTCTTCTAGCTTTGCTTATAAGTTGCTTGCCTATTTTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNSLARNISCSIRSSIHTNYLQHQQWRGIRVKVLNGNLDQALKFMQRKMQSSGIERLIKREQIHHIKNSEKRVLARKNLEHKIRSQDLARKLKAILIKKVRYLYIFSFNN
KLLGDDAIVRMDDHTVLLALLISCLPIF

CaUC10G192450 (gene) of Watermelon (USVL246-FR2) v1 genome