; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G192730 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G192730
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description60S ribosomal protein L44
Genome locationCiama_Chr10:27363349..27365508
RNA-Seq ExpressionCaUC10G192730
SyntenyCaUC10G192730
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR000552 - Ribosomal protein L44e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3462505.1 60S ribosomal protein L44-like [Gossypium australe]4.6e-4195.56Show/hide
Query:  DLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        D  + VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
Subjt:  DLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

KAG8080729.1 hypothetical protein GUJ93_ZPchr0007g5290 [Zizania palustris]3.5e-4166.67Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL------------I
        +VNVPKTKKTYCK+KECRKHTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVL+LQCQ CKH SQH IK+            +
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL------------I

Query:  HFP---------------PLTKMQALRNWWRQEGKGNFSFL
        H P                L ++QALRN  RQEG+GN + L
Subjt:  HFP---------------PLTKMQALRNWWRQEGKGNFSFL

KJB31844.1 hypothetical protein B456_005G210700 [Gossypium raimondii]3.5e-4172.44Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHFPPLTKMQALR
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+           LR
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHFPPLTKMQALR

Query:  NWWRQEGKGNFSFLDPLSVFIFCHFFF
            + GK +  F   +   + C  +F
Subjt:  NWWRQEGKGNFSFLDPLSVFIFCHFFF

XP_019081385.1 PREDICTED: 60S ribosomal protein L44 isoform X1 [Vitis vinifera]3.5e-4195.6Show/hide
Query:  HDLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        H L + VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
Subjt:  HDLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

XP_028113736.1 60S ribosomal protein L44-like [Camellia sinensis]4.6e-4198.85Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL
        LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL

TrEMBL top hitse value%identityAlignment
A0A059BG29 Uncharacterized protein2.9e-4195.56Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHF
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+  F
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHF

A0A0D2RJ15 Uncharacterized protein1.7e-4172.44Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHFPPLTKMQALR
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+           LR
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHFPPLTKMQALR

Query:  NWWRQEGKGNFSFLDPLSVFIFCHFFF
            + GK +  F   +   + C  +F
Subjt:  NWWRQEGKGNFSFLDPLSVFIFCHFFF

A0A2G2X9M1 60S ribosomal protein L442.9e-4195.51Show/hide
Query:  YLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLI
        Y VNVPKTKKTYCKSKEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK++
Subjt:  YLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLI

A0A438EC72 60S ribosomal protein L441.7e-4195.6Show/hide
Query:  HDLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        H L + VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
Subjt:  HDLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

A0A5B6V067 60S ribosomal protein L44-like2.2e-4195.56Show/hide
Query:  DLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        D  + VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
Subjt:  DLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

SwissProt top hitse value%identityAlignment
O23290 60S ribosomal protein L36a5.2e-4090.7Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

O59870 60S ribosomal protein L442.8e-3377.91Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VNVPKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK+  Q  +K
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

P0CQ50 60S ribosomal protein L442.1e-3379.07Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +K
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

P0CQ51 60S ribosomal protein L442.1e-3379.07Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +K
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

Q96499 60S ribosomal protein L441.3e-4398.84Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

Arabidopsis top hitse value%identityAlignment
AT3G23390.1 Zinc-binding ribosomal protein family protein3.7e-4190.7Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

AT4G14320.1 Zinc-binding ribosomal protein family protein3.7e-4190.7Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

AT4G14320.2 Zinc-binding ribosomal protein family protein3.7e-4190.7Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTCCTTCTTCACCCTTTTCCATTTTCTGCAATTTTAATGTCTCTTATTTCTTCTCAAGAGTCCCTCATGGGTGTACTTGTGTTCTACATCTCTGATTTCTTTCA
CGATTTGTTCTATTTGGTGAACGTTCCCAAGACAAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGG
ATAGTCTTGCTGCACAGGGTAAGCGTCGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCTGTGTTTCACAAGAAGGCAAAAACTACCAAGAAGATTGTG
TTGAGGCTGCAATGCCAAGGGTGCAAACATGTATCCCAGCACCCAATCAAGCTAATCCATTTCCCTCCCCTTACAAAGATGCAAGCACTTCGAAATTGGTGGAGACAAGA
AGGGAAAGGGAACTTCTCTTTTCTAGACCCTTTGTCAGTTTTTATCTTTTGTCATTTCTTTTTCACAAGATTATTTGTTATTGGAGTTCTTGCACCATTACTCTGTGTTC
AGCAATTAGTTCTACGTGCCTCCTTTCTCATAGAAACTTGTCTGCATGAGGAATCGGTCAGTAATAGAATTAATCGATTGATTATTGTTAGATTCGTGAAAATTGTCTTC
CAACTATTTCACGATAACGCAGATGAGGTACATATTTTGAGATCAAGGTTATTGTATTCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACTCCTTCTTCACCCTTTTCCATTTTCTGCAATTTTAATGTCTCTTATTTCTTCTCAAGAGTCCCTCATGGGTGTACTTGTGTTCTACATCTCTGATTTCTTTCA
CGATTTGTTCTATTTGGTGAACGTTCCCAAGACAAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGG
ATAGTCTTGCTGCACAGGGTAAGCGTCGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCTGTGTTTCACAAGAAGGCAAAAACTACCAAGAAGATTGTG
TTGAGGCTGCAATGCCAAGGGTGCAAACATGTATCCCAGCACCCAATCAAGCTAATCCATTTCCCTCCCCTTACAAAGATGCAAGCACTTCGAAATTGGTGGAGACAAGA
AGGGAAAGGGAACTTCTCTTTTCTAGACCCTTTGTCAGTTTTTATCTTTTGTCATTTCTTTTTCACAAGATTATTTGTTATTGGAGTTCTTGCACCATTACTCTGTGTTC
AGCAATTAGTTCTACGTGCCTCCTTTCTCATAGAAACTTGTCTGCATGAGGAATCGGTCAGTAATAGAATTAATCGATTGATTATTGTTAGATTCGTGAAAATTGTCTTC
CAACTATTTCACGATAACGCAGATGAGGTACATATTTTGAGATCAAGGTTATTGTATTCTGTCTGA
Protein sequenceShow/hide protein sequence
MVLLLHPFPFSAILMSLISSQESLMGVLVFYISDFFHDLFYLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIV
LRLQCQGCKHVSQHPIKLIHFPPLTKMQALRNWWRQEGKGNFSFLDPLSVFIFCHFFFTRLFVIGVLAPLLCVQQLVLRASFLIETCLHEESVSNRINRLIIVRFVKIVF
QLFHDNADEVHILRSRLLYSV