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CaUC10G192880 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G192880
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr10:27631649..27631999
RNA-Seq ExpressionCaUC10G192880
SyntenyCaUC10G192880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN58530.1 hypothetical protein Csa_000893 [Cucumis sativus]1.2e-1858.47Show/hide
Query:  MGVVVPLLQLPNLYHHYSHSQHPIRIEAHTLLHSFISSS--SSPLFIFLTFPISPTNYRPLISVDSTRY-------PSISSLLSEFPLNYAFFLISCFLG
        MGVVVPL+QLPNLYHHYSHSQHPIRI+AHTLLHSFISSS  SS L IFLTF ISPT++RP IS  S          PS SS    F +   F L  C L 
Subjt:  MGVVVPLLQLPNLYHHYSHSQHPIRIEAHTLLHSFISSS--SSPLFIFLTFPISPTNYRPLISVDSTRY-------PSISSLLSEFPLNYAFFLISCFLG

Query:  VQSSVFSSWVPVFWALQA
        +   V +S V  FW   A
Subjt:  VQSSVFSSWVPVFWALQA
TrEMBL top hitse value%identityAlignment
A0A0A0L9D4 Uncharacterized protein5.7e-1958.47Show/hide
Query:  MGVVVPLLQLPNLYHHYSHSQHPIRIEAHTLLHSFISSS--SSPLFIFLTFPISPTNYRPLISVDSTRY-------PSISSLLSEFPLNYAFFLISCFLG
        MGVVVPL+QLPNLYHHYSHSQHPIRI+AHTLLHSFISSS  SS L IFLTF ISPT++RP IS  S          PS SS    F +   F L  C L 
Subjt:  MGVVVPLLQLPNLYHHYSHSQHPIRIEAHTLLHSFISSS--SSPLFIFLTFPISPTNYRPLISVDSTRY-------PSISSLLSEFPLNYAFFLISCFLG

Query:  VQSSVFSSWVPVFWALQA
        +   V +S V  FW   A
Subjt:  VQSSVFSSWVPVFWALQA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTTGTTGTTCCTCTCTTACAATTACCAAACCTTTACCATCACTACTCCCACTCTCAACACCCAATACGAATCGAAGCCCACACGCTTTTACATTCATTCATTTC
GTCATCGTCATCGCCCCTCTTCATCTTCCTCACTTTCCCCATCTCTCCGACGAATTACCGGCCGTTGATCTCTGTTGACTCTACTCGGTACCCTTCAATTTCTTCTCTTC
TCTCTGAATTTCCCCTTAATTATGCTTTCTTTCTGATTTCTTGCTTTTTGGGTGTCCAAAGCTCAGTTTTTTCCAGCTGGGTTCCTGTGTTTTGGGCCCTTCAAGCTCTT
GAACTCCTTGGTTTTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTTGTTGTTCCTCTCTTACAATTACCAAACCTTTACCATCACTACTCCCACTCTCAACACCCAATACGAATCGAAGCCCACACGCTTTTACATTCATTCATTTC
GTCATCGTCATCGCCCCTCTTCATCTTCCTCACTTTCCCCATCTCTCCGACGAATTACCGGCCGTTGATCTCTGTTGACTCTACTCGGTACCCTTCAATTTCTTCTCTTC
TCTCTGAATTTCCCCTTAATTATGCTTTCTTTCTGATTTCTTGCTTTTTGGGTGTCCAAAGCTCAGTTTTTTCCAGCTGGGTTCCTGTGTTTTGGGCCCTTCAAGCTCTT
GAACTCCTTGGTTTTTTATGA
Protein sequenceShow/hide protein sequence
MGVVVPLLQLPNLYHHYSHSQHPIRIEAHTLLHSFISSSSSPLFIFLTFPISPTNYRPLISVDSTRYPSISSLLSEFPLNYAFFLISCFLGVQSSVFSSWVPVFWALQAL
ELLGFL