; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G193360 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G193360
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description60S ribosomal protein L23
Genome locationCiama_Chr10:28087783..28098070
RNA-Seq ExpressionCaUC10G193360
SyntenyCaUC10G193360
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000218 - Ribosomal protein L14P


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4315829.1 unnamed protein product [Prunus armeniaca]5.9e-1354.55Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNV--SGNASHGSKRMGC--------------SRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK+LP V  + +ASHG++   C              + VIVNPKGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNV--SGNASHGSKRMGC--------------SRVIVNPKGEMKG

KAF6169780.1 hypothetical protein GIB67_034172, partial [Kingdonia uniflora]4.7e-1857Show/hide
Query:  KDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRMGCSRVIVNPKGEMKG
        +DL  TS GCH VYQWQR +        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK    VS  AS        + VIVNPKGEMKG
Subjt:  KDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRMGCSRVIVNPKGEMKG

KAF6175559.1 hypothetical protein GIB67_007869, partial [Kingdonia uniflora]4.8e-1559.46Show/hide
Query:  KRAKDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKIL
        K A+DL  T+LGCHWV+QWQ+      T   +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK++
Subjt:  KRAKDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKIL

KAG6764590.1 hypothetical protein POTOM_032066 [Populus tomentosa]2.8e-1549.22Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG----------VLLDRSGHIC
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK++P V        +R           + VIVNPKGEMKG          V L+RS  I 
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG----------VLLDRSGHIC

Query:  GLGLQVQPMLLF-----SVLLEFKSYSR
        GLGLQVQ ML F     SV   ++SY R
Subjt:  GLGLQVQPMLLF-----SVLLEFKSYSR

RWW56092.1 hypothetical protein BHE74_00037219 [Ensete ventricosum]1.0e-1241.13Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNV------SGNASHG---------SKRMGCSRVIVNPKGEMKGV------------
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK++P V            G         SK    + VIVNPKGEMKG+            
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNV------SGNASHG---------SKRMGCSRVIVNPKGEMKGV------------

Query:  -----LL-----DRSGHICGLGLQVQPMLLFSVLLEFKSYS
             LL     +RS   CG GL  Q MLL + ++  + Y+
Subjt:  -----LL-----DRSGHICGLGLQVQPMLLFSVLLEFKSYS

TrEMBL top hitse value%identityAlignment
A0A0R0GZ38 Uncharacterized protein4.1e-1253.57Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKGVLLD
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK+LP V        +R           + VIVNPKGEMKG+  D
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKGVLLD

A0A6J5XQ86 Uncharacterized protein2.9e-1354.55Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNV--SGNASHGSKRMGC--------------SRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK+LP V  + +ASHG++   C              + VIVNPKGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNV--SGNASHGSKRMGC--------------SRVIVNPKGEMKG

A0A7J7NRW2 Uncharacterized protein2.3e-1857Show/hide
Query:  KDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRMGCSRVIVNPKGEMKG
        +DL  TS GCH VYQWQR +        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK    VS  AS        + VIVNPKGEMKG
Subjt:  KDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRMGCSRVIVNPKGEMKG

A0A7J7P7Z8 Uncharacterized protein2.3e-1559.46Show/hide
Query:  KRAKDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKIL
        K A+DL  T+LGCHWV+QWQ+      T   +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK++
Subjt:  KRAKDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKIL

K7U8V8 60S ribosomal protein L234.9e-1351.06Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKGVLLDRSGHICGLGL
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK++P V        +R           + VIVNPKGEMKG+LL+    +C L L
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKGVLLDRSGHICGLGL

SwissProt top hitse value%identityAlignment
P49690 60S ribosomal protein L239.5e-1455Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK+LP V        +R           + VIVNPKGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG

P62829 60S ribosomal protein L232.2e-1050Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP A VGDM + T KKGKP+L+KK+ P V        +R           + VIVN KGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG

Q07760 60S ribosomal protein L231.4e-1252.5Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK++P V        +R           + VIVN KGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG

Q3T057 60S ribosomal protein L232.2e-1050Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP A VGDM + T KKGKP+L+KK+ P V        +R           + VIVN KGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG

Q90YU5 60S ribosomal protein L232.2e-1050Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP A VGDM + T KKGKP+L+KK+ P V        +R           + VIVN KGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG

Arabidopsis top hitse value%identityAlignment
AT1G04480.1 Ribosomal protein L14p/L23e family protein6.7e-1555Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK+LP V        +R           + VIVNPKGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG

AT2G33370.1 Ribosomal protein L14p/L23e family protein6.7e-1555Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK+LP V        +R           + VIVNPKGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG

AT3G04400.1 Ribosomal protein L14p/L23e family protein6.7e-1555Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK+LP V        +R           + VIVNPKGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG

AT3G04400.2 Ribosomal protein L14p/L23e family protein6.7e-1555Show/hide
Query:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG
        +NLYII+ K IKG LN+LP ACVGDM + T KKGKPDL+KK+LP V        +R           + VIVNPKGEMKG
Subjt:  RNLYIITAKYIKGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRM--------GCSRVIVNPKGEMKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCAGTACCATAGCCCACACTTCGTTCTACCCAAGAGCTCCATTTCACACAAAAGGAGGAGACGAAACGAGACATCCGATATAGAATCCAATCTTAATCAAGGGCA
TCATAGTTACCTTCAATTCAAGTTTTGGGCCTTGGCTTTGCAAGACTCTTCAGATGTTAAAGTTATTCAAAGTGGTGTTGCCAAAAGGTGGATTCTCTACAGCAGTTGCT
TGCAGGCCGTCTTTATGATGTTGATTGTTCTATCTCCTTGGAGGGAATTTACCGTAATGGTGGTAAAAGCCAATATTCATATTGAGCCATATTTTCCTTTGGACTGTAGA
GGTAAAAGCCATTGTCAACCTCTTAAGAAGGCGGCAAAAAAGCTGACCTCATCAAAAGATTCCTGTGGTGCAGTTCAATTGAAAGAAACCACCTTATTTTATAGGGTTGG
ATCTTTATGGAGCTCTTCAAATATTGCTTGGGCTACTTTGGACTTTACTGATGATATTGAACTTTCTCATTTCAACTGGGGAAAATGTCAAAACAAGCGTGCAAAGGATC
TACATGTAACAAGTTTGGGATGTCACTGGGTCTACCAATGGCAGCGATGGTATATTGTGCCAGCAACACAGGAGCCAAGAAACCTGTACATCATCACAGCAAAGTATATC
AAGGGACATTTGAACAAATTGCCATTGGCTTGTGTTGGAGACATGGCGGTGGAAACTAAAAAAAAGGGAAAGCCCGATCTCAAGAAGAAGATCCTTCCTAATGTGTCAGG
CAACGCAAGCCATGGCAGCAAAAGGATGGGGTGTTCACGAGTGATTGTGAACCCAAAAGGTGAAATGAAGGGTGTCCTATTGGACAGGAGTGGGCACATTTGTGGCCTAG
GATTGCAAGTGCAACCAATGCTATTGTTTAGTGTTCTTCTAGAGTTCAAATCTTATAGCAGGCAGGACTTGATCTCTCAACCTAGCACCTGTGGCAGTGAATTGGTGCCC
CTCCACGTCACTAAGCCATTCTCTGGCTATTTCTCATTTTCATATCTAAAAGTGTATTGCCTTAGTAGACTTCTCCATCATGGCATCAATTTGGGCACCTTCAACCTCAA
CACCAATGGCACGGACAAATATACTCTAATGGTTAACCACATTGAATTTGTCGATGACACATTAGTGTTCTCTTCACATGATCCATTGAACATTATGAACTTTTTTAATA
ACACCACGATCCTCAAAATGGCATCTGGTCTTAACAAAAATTATGGCAAGAGTGAAATGATGGGGATTAATATTCCTCCTAAGTCCCTTGAATACATTGTTGATACCCAT
GGGTGCAAGATGGAATTAGAAAGCATCGTGCTTTCTATATCTTTTCTTCCCTCTTCGTTGATTGTTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCAGTACCATAGCCCACACTTCGTTCTACCCAAGAGCTCCATTTCACACAAAAGGAGGAGACGAAACGAGACATCCGATATAGAATCCAATCTTAATCAAGGGCA
TCATAGTTACCTTCAATTCAAGTTTTGGGCCTTGGCTTTGCAAGACTCTTCAGATGTTAAAGTTATTCAAAGTGGTGTTGCCAAAAGGTGGATTCTCTACAGCAGTTGCT
TGCAGGCCGTCTTTATGATGTTGATTGTTCTATCTCCTTGGAGGGAATTTACCGTAATGGTGGTAAAAGCCAATATTCATATTGAGCCATATTTTCCTTTGGACTGTAGA
GGTAAAAGCCATTGTCAACCTCTTAAGAAGGCGGCAAAAAAGCTGACCTCATCAAAAGATTCCTGTGGTGCAGTTCAATTGAAAGAAACCACCTTATTTTATAGGGTTGG
ATCTTTATGGAGCTCTTCAAATATTGCTTGGGCTACTTTGGACTTTACTGATGATATTGAACTTTCTCATTTCAACTGGGGAAAATGTCAAAACAAGCGTGCAAAGGATC
TACATGTAACAAGTTTGGGATGTCACTGGGTCTACCAATGGCAGCGATGGTATATTGTGCCAGCAACACAGGAGCCAAGAAACCTGTACATCATCACAGCAAAGTATATC
AAGGGACATTTGAACAAATTGCCATTGGCTTGTGTTGGAGACATGGCGGTGGAAACTAAAAAAAAGGGAAAGCCCGATCTCAAGAAGAAGATCCTTCCTAATGTGTCAGG
CAACGCAAGCCATGGCAGCAAAAGGATGGGGTGTTCACGAGTGATTGTGAACCCAAAAGGTGAAATGAAGGGTGTCCTATTGGACAGGAGTGGGCACATTTGTGGCCTAG
GATTGCAAGTGCAACCAATGCTATTGTTTAGTGTTCTTCTAGAGTTCAAATCTTATAGCAGGCAGGACTTGATCTCTCAACCTAGCACCTGTGGCAGTGAATTGGTGCCC
CTCCACGTCACTAAGCCATTCTCTGGCTATTTCTCATTTTCATATCTAAAAGTGTATTGCCTTAGTAGACTTCTCCATCATGGCATCAATTTGGGCACCTTCAACCTCAA
CACCAATGGCACGGACAAATATACTCTAATGGTTAACCACATTGAATTTGTCGATGACACATTAGTGTTCTCTTCACATGATCCATTGAACATTATGAACTTTTTTAATA
ACACCACGATCCTCAAAATGGCATCTGGTCTTAACAAAAATTATGGCAAGAGTGAAATGATGGGGATTAATATTCCTCCTAAGTCCCTTGAATACATTGTTGATACCCAT
GGGTGCAAGATGGAATTAGAAAGCATCGTGCTTTCTATATCTTTTCTTCCCTCTTCGTTGATTGTTACTTAA
Protein sequenceShow/hide protein sequence
MVQYHSPHFVLPKSSISHKRRRRNETSDIESNLNQGHHSYLQFKFWALALQDSSDVKVIQSGVAKRWILYSSCLQAVFMMLIVLSPWREFTVMVVKANIHIEPYFPLDCR
GKSHCQPLKKAAKKLTSSKDSCGAVQLKETTLFYRVGSLWSSSNIAWATLDFTDDIELSHFNWGKCQNKRAKDLHVTSLGCHWVYQWQRWYIVPATQEPRNLYIITAKYI
KGHLNKLPLACVGDMAVETKKKGKPDLKKKILPNVSGNASHGSKRMGCSRVIVNPKGEMKGVLLDRSGHICGLGLQVQPMLLFSVLLEFKSYSRQDLISQPSTCGSELVP
LHVTKPFSGYFSFSYLKVYCLSRLLHHGINLGTFNLNTNGTDKYTLMVNHIEFVDDTLVFSSHDPLNIMNFFNNTTILKMASGLNKNYGKSEMMGINIPPKSLEYIVDTH
GCKMELESIVLSISFLPSSLIVT