; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G193520 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G193520
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptiondisease resistance protein RGA2-like
Genome locationCiama_Chr10:28275498..28277375
RNA-Seq ExpressionCaUC10G193520
SyntenyCaUC10G193520
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651192.1 hypothetical protein Csa_002145 [Cucumis sativus]8.0e-0634.62Show/hide
Query:  KVVIAKIISPKVVVFRIGHQPWLVNPTQQLMLKTSGPLKNLKGALELTNLEK------------AQYKEEAMAAKLKELYIHTMRNLEKWDE---LISSN
        KV+   I    +V  R+GH        +  +L   G L NLK  LE+  +E             + ++      +LK+L I+ M NLE+WDE   ++ SN
Subjt:  KVVIAKIISPKVVVFRIGHQPWLVNPTQQLMLKTSGPLKNLKGALELTNLEK------------AQYKEEAMAAKLKELYIHTMRNLEKWDE---LISSN

Query:  LFGSLQKFHIMECDKLTKLPSGLEGFHFIQ
        LFG L++  I  C+ L KLPSGLEG H ++
Subjt:  LFGSLQKFHIMECDKLTKLPSGLEGFHFIQ

XP_004136783.2 disease resistance protein RGA2 [Cucumis sativus]8.0e-0634.62Show/hide
Query:  KVVIAKIISPKVVVFRIGHQPWLVNPTQQLMLKTSGPLKNLKGALELTNLEK------------AQYKEEAMAAKLKELYIHTMRNLEKWDE---LISSN
        KV+   I    +V  R+GH        +  +L   G L NLK  LE+  +E             + ++      +LK+L I+ M NLE+WDE   ++ SN
Subjt:  KVVIAKIISPKVVVFRIGHQPWLVNPTQQLMLKTSGPLKNLKGALELTNLEK------------AQYKEEAMAAKLKELYIHTMRNLEKWDE---LISSN

Query:  LFGSLQKFHIMECDKLTKLPSGLEGFHFIQ
        LFG L++  I  C+ L KLPSGLEG H ++
Subjt:  LFGSLQKFHIMECDKLTKLPSGLEGFHFIQ

XP_038877687.1 putative disease resistance protein RGA1 [Benincasa hispida]1.2e-0962.26Show/hide
Query:  KLKELYIHTMRNLEKWDELISSNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQ
        +L+ELYI  M+ LE+WDE  +SNLFGSL+K  ++ CDKLTKLPSG EG H I+
Subjt:  KLKELYIHTMRNLEKWDELISSNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQ

XP_038877689.1 putative disease resistance protein RGA3 [Benincasa hispida]1.8e-1036.49Show/hide
Query:  LMLKTSGPLKNLKGAL------------ELTNLEKAQYKEEAMAAKLKELYIHTMRNLEKWDE--LISSNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQ
        +ML   G L NLK  L            E   ++  Q +      +LKEL+I+ M+ LE+WDE  ++SSNLFG L+K HI  C +L KLPSGLEG H I+
Subjt:  LMLKTSGPLKNLKGAL------------ELTNLEKAQYKEEAMAAKLKELYIHTMRNLEKWDE--LISSNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQ

Query:  -----------------------------SFPEGLTHLTGLKRLMITG
                                       PEGL  LT LK L I+G
Subjt:  -----------------------------SFPEGLTHLTGLKRLMITG

XP_038904500.1 disease resistance protein RGA2-like, partial [Benincasa hispida]3.7e-1140.17Show/hide
Query:  KLKELYIHTMRNLEKWDELISSNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQ-----------------------------SFPEGLTHLTGLKRLMIT
        +LK+ YI  M+NLEKWDELI+ NLFGSL+ F I+ CDKLTKLP G+E    I+                               PEGL  LT LK L+I+
Subjt:  KLKELYIHTMRNLEKWDELISSNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQ-----------------------------SFPEGLTHLTGLKRLMIT

Query:  GL---YDDDDDEPCENP
        G    Y+  D+   + P
Subjt:  GL---YDDDDDEPCENP

TrEMBL top hitse value%identityAlignment
A0A0A0LBV0 Uncharacterized protein3.9e-0634.62Show/hide
Query:  KVVIAKIISPKVVVFRIGHQPWLVNPTQQLMLKTSGPLKNLKGALELTNLEK------------AQYKEEAMAAKLKELYIHTMRNLEKWDE---LISSN
        KV+   I    +V  R+GH        +  +L   G L NLK  LE+  +E             + ++      +LK+L I+ M NLE+WDE   ++ SN
Subjt:  KVVIAKIISPKVVVFRIGHQPWLVNPTQQLMLKTSGPLKNLKGALELTNLEK------------AQYKEEAMAAKLKELYIHTMRNLEKWDE---LISSN

Query:  LFGSLQKFHIMECDKLTKLPSGLEGFHFIQ
        LFG L++  I  C+ L KLPSGLEG H ++
Subjt:  LFGSLQKFHIMECDKLTKLPSGLEGFHFIQ

A0A1S3BXM2 disease resistance protein RGA2-like1.1e-0533.87Show/hide
Query:  KLKELYIHTMRNLEKWDELIS---SNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQS-----------------------------FPEGLTHLTGLKRL
        KLK+  +  M NLE+W+  ++   SN FGSLQ   +  C KLTKLP+GLE    ++                               P+GL HL  LK +
Subjt:  KLKELYIHTMRNLEKWDELIS---SNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQS-----------------------------FPEGLTHLTGLKRL

Query:  MITGLYDDDDDEPCEN-PTTSALH
        MITG  +D D  P  N P+ + L+
Subjt:  MITGLYDDDDDEPCEN-PTTSALH

A0A5A7TNC1 Disease resistance protein RGA2-like1.1e-0533.87Show/hide
Query:  KLKELYIHTMRNLEKWDELIS---SNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQS-----------------------------FPEGLTHLTGLKRL
        KLK+  +  M NLE+W+  ++   SN FGSLQ   +  C KLTKLP+GLE    ++                               P+GL HL  LK +
Subjt:  KLKELYIHTMRNLEKWDELIS---SNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQS-----------------------------FPEGLTHLTGLKRL

Query:  MITGLYDDDDDEPCEN-PTTSALH
        MITG  +D D  P  N P+ + L+
Subjt:  MITGLYDDDDDEPCEN-PTTSALH

A0A5D3CZM0 Disease resistance protein RGA2-like1.1e-0533.87Show/hide
Query:  KLKELYIHTMRNLEKWDELIS---SNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQS-----------------------------FPEGLTHLTGLKRL
        KLK+  +  M NLE+W+  ++   SN FGSLQ   +  C KLTKLP+GLE    ++                               P+GL HL  LK +
Subjt:  KLKELYIHTMRNLEKWDELIS---SNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQS-----------------------------FPEGLTHLTGLKRL

Query:  MITGLYDDDDDEPCEN-PTTSALH
        MITG  +D D  P  N P+ + L+
Subjt:  MITGLYDDDDDEPCEN-PTTSALH

A0A6J1CVR6 putative disease resistance protein RGA31.6e-0429.73Show/hide
Query:  MLKTSGPLKNLKGALELTNLEK-----AQYKEEAMAAKLKELYIHTMRNLEKWDELIS-SNLFGSLQKFHIMECDKLTKLPSGLE---------------
        ML   G L NL   LE++ ++      +++      +KL++     + NLE+W E  S SN FGSLQ  +++ C  L KLP+GLE               
Subjt:  MLKTSGPLKNLKGALELTNLEK-----AQYKEEAMAAKLKELYIHTMRNLEKWDELIS-SNLFGSLQKFHIMECDKLTKLPSGLE---------------

Query:  --------------GFHFIQSFPEGLTHLTGLKRLMITGLYDDDDDEP
                        H  +  P GL+HLT LK + + G   D D  P
Subjt:  --------------GFHFIQSFPEGLTHLTGLKRLMITGLYDDDDDEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGAAGGCTTCACGGACGGCTTCCCCGGCGGCGACCGTCATGATAACCTCCTCGGTTCTCGGATTGATTGTCAAATTTGGTTGCTGAAGGTGGTCATCGCCAAAAT
TATTTCGCCGAAGGTGGTTGTTTTCAGAATTGGTCACCAACCGTGGCTGGTTAACCCAACTCAACAACTCATGTTGAAGACCTCAGGACCCTTGAAAAACCTCAAAGGTG
CACTAGAGCTTACAAATCTCGAGAAAGCACAATATAAAGAGGAAGCTATGGCTGCAAAATTGAAGGAACTTTATATTCATACAATGCGTAATCTGGAGAAATGGGATGAA
TTGATCAGCTCAAATTTATTTGGATCTCTTCAAAAATTTCATATTATGGAATGTGATAAATTGACAAAATTGCCAAGTGGGTTAGAAGGTTTCCACTTCATTCAATCATT
TCCAGAGGGATTAACTCACCTCACTGGCTTGAAAAGATTGATGATTACTGGATTATATGATGATGATGATGATGAGCCATGTGAGAATCCAACAACTTCAGCACTTCACT
AA
mRNA sequenceShow/hide mRNA sequence
ATGATCGAAGGCTTCACGGACGGCTTCCCCGGCGGCGACCGTCATGATAACCTCCTCGGTTCTCGGATTGATTGTCAAATTTGGTTGCTGAAGGTGGTCATCGCCAAAAT
TATTTCGCCGAAGGTGGTTGTTTTCAGAATTGGTCACCAACCGTGGCTGGTTAACCCAACTCAACAACTCATGTTGAAGACCTCAGGACCCTTGAAAAACCTCAAAGGTG
CACTAGAGCTTACAAATCTCGAGAAAGCACAATATAAAGAGGAAGCTATGGCTGCAAAATTGAAGGAACTTTATATTCATACAATGCGTAATCTGGAGAAATGGGATGAA
TTGATCAGCTCAAATTTATTTGGATCTCTTCAAAAATTTCATATTATGGAATGTGATAAATTGACAAAATTGCCAAGTGGGTTAGAAGGTTTCCACTTCATTCAATCATT
TCCAGAGGGATTAACTCACCTCACTGGCTTGAAAAGATTGATGATTACTGGATTATATGATGATGATGATGATGAGCCATGTGAGAATCCAACAACTTCAGCACTTCACT
AA
Protein sequenceShow/hide protein sequence
MIEGFTDGFPGGDRHDNLLGSRIDCQIWLLKVVIAKIISPKVVVFRIGHQPWLVNPTQQLMLKTSGPLKNLKGALELTNLEKAQYKEEAMAAKLKELYIHTMRNLEKWDE
LISSNLFGSLQKFHIMECDKLTKLPSGLEGFHFIQSFPEGLTHLTGLKRLMITGLYDDDDDEPCENPTTSALH