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CaUC10G193620 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G193620
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr10:28395495..28395869
RNA-Seq ExpressionCaUC10G193620
SyntenyCaUC10G193620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651190.1 hypothetical protein Csa_001669 [Cucumis sativus]1.1e-1364.94Show/hide
Query:  MASLVLLLSELLRHHHTNPDYWLTIPLPPPT------SSSAAPKSLLP-TECGYSN--KSRICADETVIDEFLKESR
        MASL+LLLS+LLRHH TNPDY LT+P PP T      SSSA   S+LP ++C Y+N  K+RICADE V+DEFLKESR
Subjt:  MASLVLLLSELLRHHHTNPDYWLTIPLPPPT------SSSAAPKSLLP-TECGYSN--KSRICADETVIDEFLKESR

KAG6580906.1 hypothetical protein SDJN03_20908, partial [Cucurbita argyrosperma subsp. sororia]3.6e-0748.84Show/hide
Query:  MASLVLLLSELLRHHHTNPDYWLTIPL-----PPPTSSSAAPKSLLPTECGYSNKSRICADET---------VIDEFLKESRKIVS
        MASLVLLLSEL+RHH+TNPDYWLT+PL     PPP+S SA  KS L ++C  +N SR  + +          +I EFL  S  +++
Subjt:  MASLVLLLSELLRHHHTNPDYWLTIPL-----PPPTSSSAAPKSLLPTECGYSNKSRICADET---------VIDEFLKESRKIVS

XP_038904495.1 uncharacterized WD repeat-containing protein C2A9.03-like [Benincasa hispida]3.6e-2384Show/hide
Query:  MASLVLLLSELLRHHHTNPDYWLTIPLPPP-----TSSSAAPKSLLPTECGYSNKSRICADETVIDEFLKESRKI
        MASLVLLLSELLRHH+TNPDYWLTIPLPPP     TSSS A KSLLP+E  YSNKSRICADETVIDEFLKESR I
Subjt:  MASLVLLLSELLRHHHTNPDYWLTIPLPPP-----TSSSAAPKSLLPTECGYSNKSRICADETVIDEFLKESRKI

TrEMBL top hitse value%identityAlignment
A0A0A0LHI4 Uncharacterized protein4.3e-1463.75Show/hide
Query:  MASLVLLLSELLRHHHTNPDYWLTIPLPPPT------SSSAAPKSLLP-TECGYSN--KSRICADETVIDEFLKESRKIV
        MASL+LLLS+LLRHH TNPDY LT+P PP T      SSSA   S+LP ++C Y+N  K+RICADE V+DEFLKESR  V
Subjt:  MASLVLLLSELLRHHHTNPDYWLTIPLPPPT------SSSAAPKSLLP-TECGYSN--KSRICADETVIDEFLKESRKIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCTCGTTCTTCTCCTCTCCGAACTCCTCCGTCACCACCACACCAATCCCGATTACTGGCTCACTATTCCACTTCCGCCGCCGACGTCTTCTTCTGCCGCCCC
AAAGTCGCTGCTGCCAACTGAGTGCGGTTACAGCAATAAGAGCCGGATCTGTGCCGATGAGACTGTAATCGATGAGTTTCTCAAGGAATCTAGGAAAATTGTGTCTGGTC
AAACAGAGTGCCATTTTCTCAATGCTATGCTCTGCAAAATGTACAAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTCTCGTTCTTCTCCTCTCCGAACTCCTCCGTCACCACCACACCAATCCCGATTACTGGCTCACTATTCCACTTCCGCCGCCGACGTCTTCTTCTGCCGCCCC
AAAGTCGCTGCTGCCAACTGAGTGCGGTTACAGCAATAAGAGCCGGATCTGTGCCGATGAGACTGTAATCGATGAGTTTCTCAAGGAATCTAGGAAAATTGTGTCTGGTC
AAACAGAGTGCCATTTTCTCAATGCTATGCTCTGCAAAATGTACAAATTGTAA
Protein sequenceShow/hide protein sequence
MASLVLLLSELLRHHHTNPDYWLTIPLPPPTSSSAAPKSLLPTECGYSNKSRICADETVIDEFLKESRKIVSGQTECHFLNAMLCKMYKL