| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004136650.1 DNA-directed RNA polymerase V subunit 5A [Cucumis sativus] | 2.1e-104 | 71.09 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSP+ID SLQQFRE +GQ PDVDRLK+SA H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ LPRMLRTDAIARYYGLEKGQVVKVTYDGDMT +H+TYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| XP_008443287.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Cucumis melo] | 1.1e-105 | 72.11 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSPDIDLSLQQFR+I+GQ PDVDRLK+ A H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ LPRMLRTDAIARYYGLEKGQVVKVTYDGDMTS+HVTYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| XP_022158561.1 DNA-directed RNA polymerase V subunit 5A [Momordica charantia] | 3.5e-104 | 71.43 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEPN+VE GTCLSSYIDNG+TESHRYFL RRTVLEMLRDRGYT + D DL+LQQFREIYGQSPDVDRLK+SAVHRSDPSKR+LVIFCGTG+V
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAV+LFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ LPRMLRTDAIARYYGLEKGQVVKVTYDGDMT SHVTYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| XP_023539155.1 DNA-directed RNA polymerase V subunit 5A [Cucurbita pepo subsp. pepo] | 2.1e-101 | 69.39 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGF GEPN+VE GTCLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+N DIDL+LQQFREIYGQ PDVDRLK+SA H +DPSKR+LVIFCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ LPRMLRTDAIARYYGLEKGQ+VKVTYDGDMT SHVTYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| XP_038903402.1 DNA-directed RNA polymerase V subunit 5A [Benincasa hispida] | 1.1e-108 | 74.49 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEPN+VEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNS DIDLSLQQFREIYGQSPDVDRLK+SAVHRSDPSKRVLVIFCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVL+EEEKQKLL+QYSIEEKQ LPRMLR DA+ARYYGLEKGQVVKVTYDGDMT SHVTYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCG9 Uncharacterized protein | 1.0e-104 | 71.09 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSP+ID SLQQFRE +GQ PDVDRLK+SA H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ LPRMLRTDAIARYYGLEKGQVVKVTYDGDMT +H+TYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| A0A1S3B7M5 DNA-directed RNA polymerase V subunit 5A | 5.3e-106 | 72.11 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NSPDIDLSLQQFR+I+GQ PDVDRLK+ A H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ LPRMLRTDAIARYYGLEKGQVVKVTYDGDMTS+HVTYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| A0A6J1E191 DNA-directed RNA polymerase V subunit 5A | 1.7e-104 | 71.43 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEPN+VE GTCLSSYIDNG+TESHRYFL RRTVLEMLRDRGYT + D DL+LQQFREIYGQSPDVDRLK+SAVHRSDPSKR+LVIFCGTG+V
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAV+LFSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ LPRMLRTDAIARYYGLEKGQVVKVTYDGDMT SHVTYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| A0A6J1GH86 DNA-directed RNA polymerase V subunit 5A isoform X2 | 2.3e-101 | 69.39 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGF GEPN+VE GTCLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+N DIDL+LQQFREIYGQ DVDRLK+SA HR+DPSKR+LVIFCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ LPRMLRTDAIARYYGLEKGQ+VKVTYDGDMT SHVTYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 1.4e-101 | 69.39 | Show/hide |
Query: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
MEEDGF GEPN+VE GTCLSSYID+GTTESHRY+LSRRTVLEMLRDRGYT+N DIDL+LQQFREIYGQ PDVDRLK+SA HR+DPSKR+LVIFCGTGAV
Subjt: MEEDGFEGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQ
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ LPRMLRTDAIARYY LEKGQ+VKVTYDGDMT SHVTYRCVW
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.1e-20 | 26.3 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDR-----LKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLIL
E++R + R+TVL+M+ DRGY + ++D L+ F+E +G P + L I H DP+ ++ V F + + I+ I Q+ + ++ I+
Subjt: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDR-----LKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLIL
Query: IVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVNITKHAL
+VQ +T A +++ + ++ L EA +L+VNIT+H L
Subjt: IVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVNITKHAL
Query: KPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
P H V+T EEK +LL +Y +++ Q LPR+ + D +ARY+GL +GQVVK+ + ++TYR V
Subjt: KPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
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| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 5.2e-42 | 34.47 | Show/hide |
Query: EEDGFEGEPNQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
EE E + + GT C+S D G ES R++L+R T EMLRDRGY +N ++ L+L +FR ++G+ P+++RL+I RSDP K++LV+F GT +
Subjt: EEDGFEGEPNQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
V ++R + QI+N LH +IL++Q+++ + A KA+ F F VE F
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
I DLLVNITKH +P ++L +EEK++LL+++++E+KQ LP + D+ RYYGL+K QVVK+TY + VTYRC+
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
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| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 7.2e-68 | 49.82 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDS
CLS Y+D + ESHRY+L+RR L+MLRDRGY ++ DI+LSL FR +YG+ PDVDRL+ISA+HRSD +K+V ++F GT VKVNAIR++ I ++++
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDS
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVN
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQ ITDLLVN
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVN
Query: ITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITKH+LKP HQVL +EEK LLK++SIEEKQ LPR+ + DAI RYYGLEKGQVVKV Y G++T SHV +RCVW
Subjt: ITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.5e-20 | 26.3 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDR-----LKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLIL
E++R + R+TVL+M+ DRGY + ++D L+ F+ YG P + L I H DP+ ++ V F + + I+ I Q+ + ++ I+
Subjt: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDR-----LKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLIL
Query: IVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVNITKHAL
+VQ +T A +++ + ++ L EA +L+VNIT+H L
Subjt: IVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVNITKHAL
Query: KPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
P H V+T EEK +LL +Y +++ Q LPR+ + D +ARY+GL +GQVVK+ + ++TYR V
Subjt: KPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
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| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 7.7e-62 | 45.64 | Show/hide |
Query: EGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIR
EG+ ++ G +S + E H+Y+L+RRT +EMLRDRGY ++ DI+LSLQQFR +YG+ PDVD L+ISA HR D SK++ V+FCGTG VKVNA+R
Subjt: EGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIR
Query: NIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEA
IA + +++++ GLIL++Q+ ITNQA+KAVELFSFKVE+F+
Subjt: NIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEA
Query: YPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQ LPR+ D I RYYGLE GQV+KVTY +++ SHVTYRCV
Subjt: YPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 5.5e-63 | 45.64 | Show/hide |
Query: EGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIR
EG+ ++ G +S + E H+Y+L+RRT +EMLRDRGY ++ DI+LSLQQFR +YG+ PDVD L+ISA HR D SK++ V+FCGTG VKVNA+R
Subjt: EGEPNQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIR
Query: NIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEA
IA + +++++ GLIL++Q+ ITNQA+KAVELFSFKVE+F+
Subjt: NIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEA
Query: YPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQ LPR+ D I RYYGLE GQV+KVTY +++ SHVTYRCV
Subjt: YPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 6.8e-21 | 27.34 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQ
E R + ++T+++MLRDRGY + ++ ++ QQF +G + + L R+D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQ
Query: ITNQAMKAVELFS--FKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVNITKHALKPN
+T A + S F +E+FQ+ ++LVNI +H L P
Subjt: ITNQAMKAVELFS--FKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVNITKHALKPN
Query: HQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
HQVLT EEK+ LL++Y+++E Q LPR+ TD IARY+GL++GQVVK+ + +VTYR V
Subjt: HQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 3.7e-43 | 34.47 | Show/hide |
Query: EEDGFEGEPNQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
EE E + + GT C+S D G ES R++L+R T EMLRDRGY +N ++ L+L +FR ++G+ P+++RL+I RSDP K++LV+F GT +
Subjt: EEDGFEGEPNQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
V ++R + QI+N LH +IL++Q+++ + A KA+ F F VE F
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGL
Query: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
I DLLVNITKH +P ++L +EEK++LL+++++E+KQ LP + D+ RYYGL+K QVVK+TY + VTYRC+
Subjt: AQIAEAYPSHITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCV
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 5.1e-69 | 49.82 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDS
CLS Y+D + ESHRY+L+RR L+MLRDRGY ++ DI+LSL FR +YG+ PDVDRL+ISA+HRSD +K+V ++F GT VKVNAIR++ I ++++
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQSPDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDS
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVN
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQ ITDLLVN
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVN
Query: ITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
ITKH+LKP HQVL +EEK LLK++SIEEKQ LPR+ + DAI RYYGLEKGQVVKV Y G++T SHV +RCVW
Subjt: ITKHALKPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYRCVW
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 9.2e-18 | 26.87 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQS---PDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLILIV
E R F RRTVL+MLRDRGYT+ D++L ++F + + ++ + + L +SA +P+ ++ V + V V I+ D +H I++V
Subjt: ESHRYFLSRRTVLEMLRDRGYTLNSPDIDLSLQQFREIYGQS---PDVDRLKISAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHGLILIV
Query: QNQITNQAMKAVELFS--FKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVNITKHAL
IT A AV + +E+F++ +L+ NIT+H L
Subjt: QNQITNQAMKAVELFS--FKVEIFQDRPKRSWWRQLYWSTSIRGLEWLTHDLLVLTIGVKHCRRLMPWAALEKRFGLAQIAEAYPSHITDLLVNITKHAL
Query: KPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYR
+ VL ++ K+KLL Y++++ Q LPR+L TD +ARYYGL++GQVVK+ + + TYR
Subjt: KPNHQVLTEEEKQKLLKQYSIEEKQVRYGKLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSSHVTYR
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