; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G193780 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G193780
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionrRNA-processing protein FCF1-like protein
Genome locationCiama_Chr10:28599609..28602757
RNA-Seq ExpressionCaUC10G193780
SyntenyCaUC10G193780
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR002716 - PIN domain
IPR006984 - rRNA-processing protein Fcf1/Utp23
IPR029060 - PIN-like domain superfamily
IPR037503 - rRNA-processing protein Fcf1, PIN domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053874.1 rRNA-processing protein FCF1-like protein [Cucumis melo var. makuwa]2.0e-9891.84Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKK+VTSKAIKNYK+EVLNPKRKDL KENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE-----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGG
        TDCVMAELE           RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEAT+GGG
Subjt:  TDCVMAELE-----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGG

TYK25530.1 rRNA-processing protein FCF1-like protein [Cucumis melo var. makuwa]6.8e-9992.82Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYK+EVLNPKRKDL KENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGG
        TDCVMAELE          RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEAT+GGG
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGG

XP_004136642.1 rRNA-processing protein FCF1 homolog [Cucumis sativus]5.2e-9993.3Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDL KENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
        TDCVMAELE          RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRHQYSIERLPEAT+GG
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG

XP_022935178.1 rRNA-processing protein FCF1 homolog [Cucurbita moschata]2.0e-9892.27Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAV+KKM++SKAIKNYKEEVLNPKRKDL KENLPRN+PNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
        TDCVMAELE          RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG

XP_038903189.1 rRNA-processing protein FCF1 homolog [Benincasa hispida]8.8e-9993.3Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYKE+VLNPKRKDL KENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
        TDCVMAELE          RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEAT+GG
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG

TrEMBL top hitse value%identityAlignment
A0A0A0LEW8 PINc domain-containing protein2.5e-9993.3Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDL KENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
        TDCVMAELE          RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRHQYSIERLPEAT+GG
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG

A0A5A7UFA7 rRNA-processing protein FCF1-like protein9.5e-9991.84Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKK+VTSKAIKNYK+EVLNPKRKDL KENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE-----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGG
        TDCVMAELE           RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEAT+GGG
Subjt:  TDCVMAELE-----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGG

A0A5D3DQI4 rRNA-processing protein FCF1-like protein3.3e-9992.82Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYK+EVLNPKRKDL KENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGG
        TDCVMAELE          RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEAT+GGG
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGG

A0A6J1F9T9 rRNA-processing protein FCF1 homolog9.5e-9992.27Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAV+KKM++SKAIKNYKEEVLNPKRKDL KENLPRN+PNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
        TDCVMAELE          RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG

A0A6J1J3K9 rRNA-processing protein FCF1 homolog9.5e-9992.27Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAV+KKM++SKAIKNYKEEVLNPKRKDL KENLPRN+PNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
        TDCVMAELE          RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGG

SwissProt top hitse value%identityAlignment
Q05498 rRNA-processing protein FCF13.9e-5758.2Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MG+AKK  KF ++K+ + +K  +  K+   N K K+     L RN+P V SALFF+YN A+ PPY+VL+DTNFINFSIQ K+D+ +GMMDCL AKC P I
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE
        TDCVMAELE          ++A+DPR +RL C+HKGTYADDCLV RV QHKCYIVAT D  LK+RIRKIPG+P+M +  H Y IE+LP+
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE

Q32PD0 rRNA-processing protein FCF1 homolog1.4e-6765.97Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENL--PRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP
        MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF+YNT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC P
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENL--PRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP

Query:  CITDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE
        CITDCVMAE+E          RIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+ H+Y+IER+P+
Subjt:  CITDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE

Q5RFQ0 rRNA-processing protein FCF1 homolog1.4e-6765.97Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENL--PRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP
        MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF+YNT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC P
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENL--PRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP

Query:  CITDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE
        CITDCVMAE+E          RIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+ H+Y+IER+P+
Subjt:  CITDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE

Q9CTH6 rRNA-processing protein FCF1 homolog5.4e-6764.92Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENL--PRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP
        MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF+YNT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC P
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENL--PRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP

Query:  CITDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE
        CITDCVMAE+E          RIAKDPRF+RLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMY++ H+Y+IER+P+
Subjt:  CITDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE

Q9Y324 rRNA-processing protein FCF1 homolog1.4e-6765.97Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENL--PRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP
        MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF+YNT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC P
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENL--PRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP

Query:  CITDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE
        CITDCVMAE+E          RIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+ H+Y+IER+P+
Subjt:  CITDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE

Arabidopsis top hitse value%identityAlignment
AT1G26530.1 PIN domain-like family protein2.0e-6969.68Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGR KK  KFAVMK M++ KA+K+YKEEVLNP +KDL +  LPRNVP+VPS LFF +N++L PPYRVLVDTNFINFSIQNK+DLEKGMM          +
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGGLVY
                  IAKDPRFERLPC  KGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRKIPGVPIMY+T+ +YSIE+LPEAT+GG   Y
Subjt:  TDCVMAELERIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGGLVY

AT2G46230.1 PIN domain-like family protein1.0e-8475.76Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MG+AKK  KFAV+KKM++ KA+K+YKEEVLNP +KDL +  LPRNVP+VP+ LFF YN+ L PPYRVLVDTNFINFSIQNK+DLEKGM DCLYA CTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGGLVY
        TDCVMAELE          RIAKDP FERLPC HKGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRKIPGVPIMY+T  +YSIE+LPEAT+GG   Y
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATMGGGLVY

AT2G46230.2 PIN domain-like family protein2.9e-7176.33Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MG+AKK  KFAV+KKM++ KA+K+YKEEVLNP +KDL +  LPRNVP+VP+ LFF YN+ L PPYRVLVDTNFINFSIQNK+DLEKGM DCLYA CTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKI
        TDCVMAELE          RIAKDP FERLPC HKGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRK+
Subjt:  TDCVMAELE----------RIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTTAGTTGTTTCCTCATTACCAAAACATTGCAGATACTGAGCACAAGTCCTCCTCTAAGCTTCAAAGCATTGAAATTGCATCTGAGAGAATTTAGACAGCCATT
TGGTGACACAACTTCAATTGTTCTTTTTCATTCAATCAACGAGATGGGGAGGGCCAAGAAAGGACCCAAATTTGCAGTCATGAAGAAGATGGTCACCTCTAAAGCAATTA
AGAACTATAAGGAAGAGGTCTTGAATCCAAAAAGAAAAGATCTTATGAAAGAAAATCTCCCAAGAAATGTTCCAAATGTTCCTTCGGCACTTTTCTTCAAGTACAACACC
GCATTGGGACCACCTTATCGGGTTTTGGTGGATACAAACTTCATCAATTTCTCCATTCAAAACAAATTGGACTTGGAAAAGGGAATGATGGACTGTCTATATGCAAAATG
CACTCCTTGTATAACAGACTGTGTCATGGCTGAGCTTGAGCGAATAGCTAAGGACCCACGATTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGATGATTGCC
TCGTTGAAAGGGTGACTCAGCATAAGTGTTATATAGTTGCTACATGTGATAGAGATTTGAAGCGTAGGATTCGCAAGATTCCTGGTGTACCCATCATGTATATAACTCGG
CACCAGTATTCGATCGAGCGGTTGCCAGAAGCAACAATGGGAGGAGGTTTAGTCTATAACAGTTATTTTGGATTTGATGAACATCGACAAGCTTTTAGTTCCTGCCCTGG
AGGGTACTTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTTAGTTGTTTCCTCATTACCAAAACATTGCAGATACTGAGCACAAGTCCTCCTCTAAGCTTCAAAGCATTGAAATTGCATCTGAGAGAATTTAGACAGCCATT
TGGTGACACAACTTCAATTGTTCTTTTTCATTCAATCAACGAGATGGGGAGGGCCAAGAAAGGACCCAAATTTGCAGTCATGAAGAAGATGGTCACCTCTAAAGCAATTA
AGAACTATAAGGAAGAGGTCTTGAATCCAAAAAGAAAAGATCTTATGAAAGAAAATCTCCCAAGAAATGTTCCAAATGTTCCTTCGGCACTTTTCTTCAAGTACAACACC
GCATTGGGACCACCTTATCGGGTTTTGGTGGATACAAACTTCATCAATTTCTCCATTCAAAACAAATTGGACTTGGAAAAGGGAATGATGGACTGTCTATATGCAAAATG
CACTCCTTGTATAACAGACTGTGTCATGGCTGAGCTTGAGCGAATAGCTAAGGACCCACGATTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGATGATTGCC
TCGTTGAAAGGGTGACTCAGCATAAGTGTTATATAGTTGCTACATGTGATAGAGATTTGAAGCGTAGGATTCGCAAGATTCCTGGTGTACCCATCATGTATATAACTCGG
CACCAGTATTCGATCGAGCGGTTGCCAGAAGCAACAATGGGAGGAGGTTTAGTCTATAACAGTTATTTTGGATTTGATGAACATCGACAAGCTTTTAGTTCCTGCCCTGG
AGGGTACTTTGTTTGA
Protein sequenceShow/hide protein sequence
MIVSCFLITKTLQILSTSPPLSFKALKLHLREFRQPFGDTTSIVLFHSINEMGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLMKENLPRNVPNVPSALFFKYNT
ALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITR
HQYSIERLPEATMGGGLVYNSYFGFDEHRQAFSSCPGGYFV