; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G194460 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G194460
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr10:29440966..29444179
RNA-Seq ExpressionCaUC10G194460
SyntenyCaUC10G194460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG9458674.1 hypothetical protein H6P81_003182 [Aristolochia fimbriata]1.9e-0535.03Show/hide
Query:  IRQQNGGFFPNGGLLLTC----FVTGCGPTLTAFSDRQLNNPFPDDDLLLLLVLLFFS------------------VQGSSASDMLAMLARSKPSAVVTL
        IR  + G+F  GG +L C     +TG GPTLTAFS  QLN+P P           FF+                     +S +D   +    KPSAVVTL
Subjt:  IRQQNGGFFPNGGLLLTC----FVTGCGPTLTAFSDRQLNNPFPDDDLLLLLVLLFFS------------------VQGSSASDMLAMLARSKPSAVVTL

Query:  QSMLASLGSYQSVDG-----VIGSSRLRR----VAAGANPSLLASSSIESRRWNIAGYE-------TVSELASLATSSMSFTMVALPPDAATLARIR
        QS L SLGSY SV       V+ SSRLRR      A   P+    SS +S R  IA  E       ++S  + L + +MS + V +P   A   ++R
Subjt:  QSMLASLGSYQSVDG-----VIGSSRLRR----VAAGANPSLLASSSIESRRWNIAGYE-------TVSELASLATSSMSFTMVALPPDAATLARIR

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGTAGTTACAATTATGAAGGGGAAAAAAAAATTGAAGAGACAAGATAAGAAAATTGAAAAGTA
CACCAAACTACTGGTTCGCACAATTATTGGGGAGACACAGCGCTATAATGAAGAGGGGGGGAGGGGAATGAAAAGAAAAGAAAAATTGAAGAGACAAGATAAGAAAATCA
AGAAATGGTGTGTTGGGAGAGAGGGTGGTGGAGAAAAATCATGTGTCATCCTCCATCACACTCACAAGAGAAAAGAGTGCTCCCAAATCAGGCAGCAAAATGGTGGCTTC
TTTCCCAATGGTGGCCTACTACTCACATGCTTCGTCACCGGCTGTGGGCCCACGCTCACCGCCTTCTCCGACCGACAACTCAACAACCCATTTCCTGATGATGATCTTCT
TCTATTGTTGGTGTTGTTGTTTTTCTCAGTCCAGGGCTCTTCAGCCTCTGACATGTTGGCGATGCTCGCCCGATCAAAGCCTTCGGCTGTGGTGACGCTCCAATCGATGC
TCGCCTCGCTTGGTTCATACCAATCGGTTGACGGTGTCATCGGTTCGTCAAGGCTGCGACGTGTGGCTGCAGGGGCCAACCCCAGTCTTCTTGCTTCTAGTTCCATCGAG
TCTCGTCGATGGAACATAGCAGGGTATGAGACAGTGTCTGAGCTGGCATCACTTGCCACATCATCGATGTCGTTCACAATGGTGGCGTTGCCTCCAGATGCTGCCACGCT
AGCTAGAATCCGTGACTTTAGACTACTGCAACCACTATTGCCACCATCTCTAGCAGTGCTGCTTGGTTTGAAAACTTCTAGAGAATCTCGAGATGGGAAAAGTGAAGCCG
GTGGAGGCTATTACACGTTGCGTTGTATGTCCTTGAAGAAGCAAATTTGGAGGAAAACGTCTTTGAGTGCTCCAAACGACGTCGTTATTTGGATGCTGCAAAAGCATTGT
GTTTTCTCCGGAGAATCCCCACGCAAAACTGACACCGAGATTGCTCCAGGAGGGTTCGACAGCAACCCCTCGGCGTTGCAGAATGGAAAGATCGAGCTCGGTAGCTTCGA
CGATGATACCCATCGATGGAGCCAGAAACCACTGCAGACGACGGATGTGCAACACCACAGGTCCAAGGCTTCGATTTGGATAATTCATAATCCTTGTCTGAATCTTGGTC
TTCAGGCGACGCTACTACTGAATGATCAATATACTGCTCCGACATCGACATGGAGTTTGTTATGGGAGAAACCTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGTAGTTACAATTATGAAGGGGAAAAAAAAATTGAAGAGACAAGATAAGAAAATTGAAAAGTA
CACCAAACTACTGGTTCGCACAATTATTGGGGAGACACAGCGCTATAATGAAGAGGGGGGGAGGGGAATGAAAAGAAAAGAAAAATTGAAGAGACAAGATAAGAAAATCA
AGAAATGGTGTGTTGGGAGAGAGGGTGGTGGAGAAAAATCATGTGTCATCCTCCATCACACTCACAAGAGAAAAGAGTGCTCCCAAATCAGGCAGCAAAATGGTGGCTTC
TTTCCCAATGGTGGCCTACTACTCACATGCTTCGTCACCGGCTGTGGGCCCACGCTCACCGCCTTCTCCGACCGACAACTCAACAACCCATTTCCTGATGATGATCTTCT
TCTATTGTTGGTGTTGTTGTTTTTCTCAGTCCAGGGCTCTTCAGCCTCTGACATGTTGGCGATGCTCGCCCGATCAAAGCCTTCGGCTGTGGTGACGCTCCAATCGATGC
TCGCCTCGCTTGGTTCATACCAATCGGTTGACGGTGTCATCGGTTCGTCAAGGCTGCGACGTGTGGCTGCAGGGGCCAACCCCAGTCTTCTTGCTTCTAGTTCCATCGAG
TCTCGTCGATGGAACATAGCAGGGTATGAGACAGTGTCTGAGCTGGCATCACTTGCCACATCATCGATGTCGTTCACAATGGTGGCGTTGCCTCCAGATGCTGCCACGCT
AGCTAGAATCCGTGACTTTAGACTACTGCAACCACTATTGCCACCATCTCTAGCAGTGCTGCTTGGTTTGAAAACTTCTAGAGAATCTCGAGATGGGAAAAGTGAAGCCG
GTGGAGGCTATTACACGTTGCGTTGTATGTCCTTGAAGAAGCAAATTTGGAGGAAAACGTCTTTGAGTGCTCCAAACGACGTCGTTATTTGGATGCTGCAAAAGCATTGT
GTTTTCTCCGGAGAATCCCCACGCAAAACTGACACCGAGATTGCTCCAGGAGGGTTCGACAGCAACCCCTCGGCGTTGCAGAATGGAAAGATCGAGCTCGGTAGCTTCGA
CGATGATACCCATCGATGGAGCCAGAAACCACTGCAGACGACGGATGTGCAACACCACAGGTCCAAGGCTTCGATTTGGATAATTCATAATCCTTGTCTGAATCTTGGTC
TTCAGGCGACGCTACTACTGAATGATCAATATACTGCTCCGACATCGACATGGAGTTTGTTATGGGAGAAACCTTGTTGA
Protein sequenceShow/hide protein sequence
MMLSWLERRANNAKVAVVTIMKGKKKLKRQDKKIEKYTKLLVRTIIGETQRYNEEGGRGMKRKEKLKRQDKKIKKWCVGREGGGEKSCVILHHTHKRKECSQIRQQNGGF
FPNGGLLLTCFVTGCGPTLTAFSDRQLNNPFPDDDLLLLLVLLFFSVQGSSASDMLAMLARSKPSAVVTLQSMLASLGSYQSVDGVIGSSRLRRVAAGANPSLLASSSIE
SRRWNIAGYETVSELASLATSSMSFTMVALPPDAATLARIRDFRLLQPLLPPSLAVLLGLKTSRESRDGKSEAGGGYYTLRCMSLKKQIWRKTSLSAPNDVVIWMLQKHC
VFSGESPRKTDTEIAPGGFDSNPSALQNGKIELGSFDDDTHRWSQKPLQTTDVQHHRSKASIWIIHNPCLNLGLQATLLLNDQYTAPTSTWSLLWEKPC