CuGenDBv2

Gene ID	CaUC10G194500
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ribosome production factor 1-like
Genome location	Ciama_Chr10:29479571..29484866
RNA-Seq Expression	CaUC10G194500
Synteny	CaUC10G194500
Gene Ontology terms	GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0005730 - nucleolus (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]

6.9e-164

94.38

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Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK           IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]

5.3e-156

90.34

Show/hide

Query:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPK           IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDF+FFRHHRYIF+SKENKKE+DSK+ SKD KGEKV QQKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHK
        LISLQHGTFDSKGGEYEWVHK
Subjt:  LISLQHGTFDSKGGEYEWVHK

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]

1.2e-155

90.34

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Query:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPK           IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIF+SKENKKE+DSK+ SKD KGEKV +QKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHK
        LISLQHGTFDSKGGEYEWVHK
Subjt:  LISLQHGTFDSKGGEYEWVHK

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]

1.2e-160

92.5

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Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNK I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK           IGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]

2.9e-162

92.81

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Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEE KN+GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK           IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
        SHQPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH42 Brix domain-containing protein

5.9e-161

92.5

Show/hide

Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNK I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK           IGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

A0A1S3B854 ribosome production factor 1 isoform X1

3.3e-164

94.38

Show/hide

Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK           IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

A0A5A7UHC7 Ribosome production factor 1 isoform X1

3.3e-164

94.38

Show/hide

Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK           IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHK
        ISLQHGTFDSKGGEYEWVHK
Subjt:  ISLQHGTFDSKGGEYEWVHK

A0A6J1DPH5 ribosome production factor 1-like

5.7e-156

90.34

Show/hide

Query:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPK           IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIF+SKENKKE+DSK+ SKD KGEKV +QKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHK
        LISLQHGTFDSKGGEYEWVHK
Subjt:  LISLQHGTFDSKGGEYEWVHK

A0A6J1DT48 ribosome production factor 1-like

2.5e-156

90.34

Show/hide

Query:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPK           IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPK-----------IGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDF+FFRHHRYIF+SKENKKE+DSK+ SKD KGEKV QQKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHK
        LISLQHGTFDSKGGEYEWVHK
Subjt:  LISLQHGTFDSKGGEYEWVHK

SwissProt top hits

e value

%identity

Alignment

Q5R631 Ribosome production factor 1

9.9e-65

45.37

Show/hide

Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI---
        G   S IKNKE+R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PKI   
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI---

Query:  --------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
                      +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  --------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Q6IQU6 Ribosome production factor 1

5.8e-65

46.93

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Query:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI-------
        S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  DET   P+DEE+      DEFS+   R   PK+       
Subjt:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI-------

Query:  ----GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  ----GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+VATFHNQRDFIFFR HRYIF           KN+ K               +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK
         GEYEWVHK
Subjt:  GGEYEWVHK

Q7TND5 Ribosome production factor 1

2.2e-64

45.05

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Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI---
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   R   PKI   
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI---

Query:  --------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
                      +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  --------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Q8AVP1 Ribosome production factor 1

4.0e-66

46.01

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Query:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI---
        S IKNK++R  +   LK +K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    +   PKI   
Subjt:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI---

Query:  --------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
                   F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  --------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+VATFHNQRD+IFFR+HRY+F+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Q9H9Y2 Ribosome production factor 1

2.2e-64

45.05

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Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI---
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PKI   
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKI---

Query:  --------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
                      +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  --------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

2.1e-30

38.12

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Query:  FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLG
        F  EL  V PN+    RG+  + +IIE A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G
Subjt:  FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLG

Query:  LRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYE
         RVG +++ +FP  P    +R+ TF NQ D+I FR+H Y                 K   G K ++      L+E GPRF ++L  ++ GT +    E E
Subjt:  LRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYE

Query:  WV
        WV
Subjt:  WV

AT4G01560.1 Ribosomal RNA processing Brix domain protein

6.3e-123

69.54

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Query:  KSVFQMGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSS
        KS F  GE  K   I+PSMIKNK+KR++V+A  K++KKLEK+K+ +ARDAAEK+ALELGEE P + IP+TIENTRE DETVC+PDDEELFA  DADEF+ 
Subjt:  KSVFQMGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSS

Query:  IIKRDILPKI-----------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKN
        +++R+I PK+           GPA ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKN
Subjt:  IIKRDILPKI-----------GPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKN

Query:  HGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPR
        HGNPTSHQPELVL NFTTRLG RVGR  QSLFP DPNFRGRRV TFHNQRDFIFFRHHRYIFE+KE          SK  KG+   ++ +  RLQECGPR
Subjt:  HGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPR

Query:  FTMKLISLQHGTFDSKGGEYEWVHK
        FT+KL++LQHGTFD+KGGE+EWVHK
Subjt:  FTMKLISLQHGTFDSKGGEYEWVHK

Sequences

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CDS sequence

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ATGAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCAAACAATTTTTTTTTTTCCATTTTCCTAATATATATTTTTCA
TTTCGTTACCTTATGCTCTTCCGCTCTTGCCTCCGTCCGCCACTAGTCGAACGCCGCCACTCCTCAGTCTTCTCCTTCGCCAGTCGCCACCGCCCATATCTTCTT
TTTCTTCCGAAATCGGTCTTTCAGATGGGGGAGGAGAAAAAGAACAAGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAAC
CTCAAGAACCAGAAGAAGCTTGAGAAACGTAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATT
CCTCGCACCATTGAGAACACCAGGGAAGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCCGATGAATTTAGTTCCATCATA
AAGCGCGACATTCTGCCGAAAATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAG
ATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGTCTTTTAATTATTGGCTTACCTGAGGGACCT
ACTGCGCATTTTAAGATATCTAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGCCATCAGCCAGAGCTGGTATTGACCAACTTCACAACA
CGCCTTGGTCTTCGTGTTGGAAGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGACGGGTTGCAACTTTTCACAACCAACGAGATTTTATA
TTCTTTCGGCATCATCGATACATTTTTGAAAGCAAGGAAAATAAGAAAGAGTCAGACTCAAAAAATAAGTCCAAGGATACCAAGGGTGAGAAAGTTCTTCAGCAG
AAAGTAGTTGCTCGGCTTCAGGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCAAAAGGCGGAGAATATGAATGGGTT
CATAAGGAAACATAA

mRNA sequence

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Protein sequence

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MSWLERRANNAKVAGSRPAWAKQFFFFHFPNIYFSFRYLMLFRSCLRPPLVERRHSSVFSFASRHRPYLLFLPKSVFQMGEEKKNKGIIPSMIKNKEKRAEVHAN
LKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKIGPAFISELLSVIPNAHYYKRGTNDLKK
IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFI
FFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKET

CaUC10G194500 (gene) of Watermelon (USVL246-FR2) v1 genome