; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G195420 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G195420
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL33
Genome locationCiama_Chr10:30765987..30769679
RNA-Seq ExpressionCaUC10G195420
SyntenyCaUC10G195420
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443002.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL33 [Cucumis melo]1.2e-9578.82Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRRYRSPSPR RG RRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          EPRGFGFVQFVDAADAADAKYELDGQVLLG ELTVVFAEENRKRPEEMRARDSSRGRSYSYS R SPLRYS+SPHYDRKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
        SPEYYSPARSRRYSR  SPR RRYREQSYSRSPY+ RGRSYSRSRSRSYSRSYSR
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

XP_011652066.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucumis sativus]1.7e-9478.43Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRRYRSPSPRGRG RRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          EPRGFGFVQFVDAADAADAKYELDGQVLLG ELTVVFAEENRKRPEEMRARDSSRGRSYSYS+R SPLRYSQSPHYDRKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
         PEYYSPARSRRYSR  SPR  RYREQSYSRSP + RGRSYSRSRSRSYSRSYSR
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

XP_011652068.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X2 [Cucumis sativus]1.7e-9478.43Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRRYRSPSPRGRG RRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          EPRGFGFVQFVDAADAADAKYELDGQVLLG ELTVVFAEENRKRPEEMRARDSSRGRSYSYS+R SPLRYSQSPHYDRKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
         PEYYSPARSRRYSR  SPR  RYREQSYSRSP + RGRSYSRSRSRSYSRSYSR
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

XP_031739396.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucumis sativus]4.2e-9378.12Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRRYRSPSPRGRG RRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQF-VDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYS
                          EPRGFGFVQF VDAADAADAKYELDGQVLLG ELTVVFAEENRKRPEEMRARDSSRGRSYSYS+R SPLRYSQSPHYDRKYS
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQF-VDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYS

Query:  RSPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
        R PEYYSPARSRRYSR  SPR  RYREQSYSRSP + RGRSYSRSRSRSYSRSYSR
Subjt:  RSPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

XP_038905592.1 serine/arginine-rich SC35-like splicing factor SCL33 [Benincasa hispida]1.7e-9479.34Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRRYRSPSPRG G+RRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          EPRGFGFVQFVDAADAADAKYELDGQVLLGRE+TVVFAEENRKRPEEMRARDSSRGRSYSYS+R SPLRYSQSPHYDRKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYS
        SPEYYSPARSR+YSRSISPR RRYREQSYSRSPYNSRGRSYS
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYS

TrEMBL top hitse value%identityAlignment
A0A0A0LGW4 RRM domain-containing protein8.2e-9578.43Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRRYRSPSPRGRG RRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          EPRGFGFVQFVDAADAADAKYELDGQVLLG ELTVVFAEENRKRPEEMRARDSSRGRSYSYS+R SPLRYSQSPHYDRKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
         PEYYSPARSRRYSR  SPR  RYREQSYSRSP + RGRSYSRSRSRSYSRSYSR
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

A0A1S3B7U0 serine/arginine-rich SC35-like splicing factor SCL335.6e-9678.82Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRRYRSPSPR RG RRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          EPRGFGFVQFVDAADAADAKYELDGQVLLG ELTVVFAEENRKRPEEMRARDSSRGRSYSYS R SPLRYS+SPHYDRKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
        SPEYYSPARSRRYSR  SPR RRYREQSYSRSPY+ RGRSYSRSRSRSYSRSYSR
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

A0A6J1DCY5 serine/arginine-rich SC35-like splicing factor SCL332.6e-9376.86Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRR+RSPSPR RG R RDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          EPRGFGFVQFVD ADA DAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSY+Y  RRSPLRYS+SPHYDRKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
        SPEYYSPA+S RYSRSISPRDRRYRE+SY RSPY+SRGRSYSRSRSRSYSRSY R
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

A0A6J1KYI3 serine/arginine-rich SC35-like splicing factor SCL33 isoform X31.6e-8773.73Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRR RS SPRG G R RDLPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          +PRGFGFVQ++D ADAADAKYELDGQVLLGRELTVVFAEENRKRPE+MRARDSSRGRSYSY  RRSPL+YSQSP + RKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
        SPEYYSPARSRRYSRSISPRD+ +RE+SYSRSPYNSR R YSRSRSRS SRSYSR
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

A0A6J1L0E4 serine/arginine-rich SC35-like splicing factor SCL33 isoform X21.6e-8773.73Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV
        MRGRSYSYSPSPPRSYGRR RS SPRG G R RDLPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSG                         
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRV

Query:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR
                          +PRGFGFVQ++D ADAADAKYELDGQVLLGRELTVVFAEENRKRPE+MRARDSSRGRSYSY  RRSPL+YSQSP + RKYSR
Subjt:  SCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSR

Query:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
        SPEYYSPARSRRYSRSISPRD+ +RE+SYSRSPYNSR R YSRSRSRS SRSYSR
Subjt:  SPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

SwissProt top hitse value%identityAlignment
O75494 Serine/arginine-rich splicing factor 106.4e-2034.91Show/hide
Query:  TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAAD
        TSL VRN+  D R EDLR  FGR+GP+ D+Y+P D+Y+                                           + PRGF +VQF D  DA D
Subjt:  TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAAD

Query:  AKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSRSPEY-------YSPARSR-----RYSRSISPRDR-R
        A + LD + + GR++ + FA+ +RK P +M+A++     S S  +     R S+S  Y+R+ SRS  +       YSP  SR     R SRS S  DR +
Subjt:  AKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSRSPEY-------YSPARSR-----RYSRSISPRDR-R

Query:  YREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR
        +R +S+SRS  NSR RS S+ +    ++S SR
Subjt:  YREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR

Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL282.3e-2539.21Show/hide
Query:  RGRSYSYSP-----SPPRSY-----GRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVL
        R RS SYSP     SPPR        R    PS R   +     P+ LL+RNL  D RP DLR  F RFGPLKDIYLPR+YY+G                
Subjt:  RGRSYSYSP-----SPPRSY-----GRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVL

Query:  KTTNEVIRVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGR--SYSYSNRRSPLRYS
                                   EPRGFGFV++  A DAA+A   ++ +V+ GRE+ +VFAEENRK P+EMR  + + GR   Y  ++ RSP R  
Subjt:  KTTNEVIRVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGR--SYSYSNRRSPLRYS

Query:  QS-------PHYDRKYS--RSPEYYSP-ARSRRYSRSISPRDRRYREQSYSRSPYNS------RGRSYSRSRSRSYSR
        +S       P  + ++S  R  + YSP  RSR  SRS  PR+ R  +    RSP         R R  SRSRSRS SR
Subjt:  QS-------PHYDRKYS--RSPEYYSP-ARSRRYSRSISPRDRRYREQSYSRSPYNS------RGRSYSRSRSRSYSR

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL302.4e-2740.68Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSP----------RGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKV
        MR  S  Y   P R YG R RSP P           G G RR     SLLVRN+  DCRPE+LR  F RFGP++D+Y+PRDYYSG               
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSP----------RGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKV

Query:  LKTTNEVIRVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQ
                                    +PRGF FV+FVDA DA +A+  ++ +   GRE+TVV A E+RKRPEEMR +  +R R  S S  RS  R S+
Subjt:  LKTTNEVIRVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQ

Query:  SPHYDRKYSRSPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSY
        S    R  SRSP   S +RSR  SRS SP  RR         P      +YSR   RSYS  Y
Subjt:  SPHYDRKYSRSPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSY

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A3.9e-5455.3Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR--GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVI
        MRGR  SY+PSPPR YGRR RSPSPRGR  G+R  DLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G                       
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR--GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVI

Query:  RVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSN-RRSPLRYSQSP---HY
                            +PRGFGF+QF+D ADAA+AK+++DG +LLGRELTVVFAEENRK+P EMR RD   GRS  + + RRSP RYS+SP     
Subjt:  RVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSN-RRSPLRYSQSP---HY

Query:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSP--YNSRGRSYSRSRSRSYSRSYSR
         R  SRS  Y SP   R  SRS+SP+DRRY +E+SYSRSP    SR RS S  R +S+SRS  R
Subjt:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSP--YNSRGRSYSRSRSRSYSRSYSR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.1e-5354.89Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR-GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIR
        MRGR  SY+PSPPR YGRR RSPSPRGR G R RDLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G                        
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR-GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIR

Query:  VSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRY-----SQSPHY
                           +PRGFGFVQF+D ADAADAK+ +DG +LLGRELTVVFAEENRK+P EMRAR+   GR      RR+P RY     S  P  
Subjt:  VSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRY-----SQSPHY

Query:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSPYN--SRGRSYS--RSRSRSYSRSYSR
         R  SRS +YYSP   R + RSISPR+ RY   +SYSRSP +  SRGRS +  R +SRS S S  R
Subjt:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSPYN--SRGRSYS--RSRSRSYSRSYSR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 338.2e-5554.89Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR-GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIR
        MRGR  SY+PSPPR YGRR RSPSPRGR G R RDLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G                        
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR-GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIR

Query:  VSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRY-----SQSPHY
                           +PRGFGFVQF+D ADAADAK+ +DG +LLGRELTVVFAEENRK+P EMRAR+   GR      RR+P RY     S  P  
Subjt:  VSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRY-----SQSPHY

Query:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSPYN--SRGRSYS--RSRSRSYSRSYSR
         R  SRS +YYSP   R + RSISPR+ RY   +SYSRSP +  SRGRS +  R +SRS S S  R
Subjt:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSPYN--SRGRSYS--RSRSRSYSRSYSR

AT1G55310.2 SC35-like splicing factor 336.2e-5554.79Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR-GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIR
        MRGR  SY+PSPPR YGRR RSPSPRGR G R RDLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G                        
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR-GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIR

Query:  VSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRY-----SQSPHY
                           +PRGFGFVQF+D ADAADAK+ +DG +LLGRELTVVFAEENRK+P EMRAR+   GR      RR+P RY     S  P  
Subjt:  VSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRY-----SQSPHY

Query:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSPYN--SRGRSYSRSRSRSYSRS
         R  SRS +YYSP   R + RSISPR+ RY   +SYSRSP +  SRGRS +  R +S S S
Subjt:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSPYN--SRGRSYSRSRSRSYSRS

AT1G55310.3 SC35-like splicing factor 331.5e-5655.09Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR-GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIR
        MRGR  SY+PSPPR YGRR RSPSPRGR G R RDLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G                   + +  
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR-GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIR

Query:  VSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQS----PHYD
         +C            K  ++PRGFGFVQF+D ADAADAK+ +DG +LLGRELTVVFAEENRK+P EMRAR+   G  +    R  P  YS+S    P   
Subjt:  VSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQS----PHYD

Query:  RKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSPYN--SRGRSYS--RSRSRSYSRSYSR
        R  SRS +YYSP   R + RSISPR+ RY   +SYSRSP +  SRGRS +  R +SRS S S  R
Subjt:  RKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSPYN--SRGRSYS--RSRSRSYSRSYSR

AT3G13570.1 SC35-like splicing factor 30A2.8e-5555.3Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR--GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVI
        MRGR  SY+PSPPR YGRR RSPSPRGR  G+R  DLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G                       
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSPRGR--GARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVI

Query:  RVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSN-RRSPLRYSQSP---HY
                            +PRGFGF+QF+D ADAA+AK+++DG +LLGRELTVVFAEENRK+P EMR RD   GRS  + + RRSP RYS+SP     
Subjt:  RVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSN-RRSPLRYSQSP---HY

Query:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSP--YNSRGRSYSRSRSRSYSRSYSR
         R  SRS  Y SP   R  SRS+SP+DRRY +E+SYSRSP    SR RS S  R +S+SRS  R
Subjt:  DRKYSRSPEYYSPARSRRYSRSISPRDRRY-REQSYSRSP--YNSRGRSYSRSRSRSYSRSYSR

AT3G55460.1 SC35-like splicing factor 301.7e-2840.68Show/hide
Query:  MRGRSYSYSPSPPRSYGRRYRSPSP----------RGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKV
        MR  S  Y   P R YG R RSP P           G G RR     SLLVRN+  DCRPE+LR  F RFGP++D+Y+PRDYYSG               
Subjt:  MRGRSYSYSPSPPRSYGRRYRSPSP----------RGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKV

Query:  LKTTNEVIRVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQ
                                    +PRGF FV+FVDA DA +A+  ++ +   GRE+TVV A E+RKRPEEMR +  +R R  S S  RS  R S+
Subjt:  LKTTNEVIRVSCGRQEASNLFIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQ

Query:  SPHYDRKYSRSPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSY
        S    R  SRSP   S +RSR  SRS SP  RR         P      +YSR   RSYS  Y
Subjt:  SPHYDRKYSRSPEYYSPARSRRYSRSISPRDRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTAGGAGTTACAGTTACAGTCCATCACCACCAAGGAGTTATGGCAGGAGATATCGTAGCCCTAGTCCAAGGGGTCGGGGAGCTCGTAGAAGGGATCTGCCAAC
AAGTCTTTTGGTTAGGAACTTAAGGCATGATTGCAGGCCAGAGGACCTACGTGGATTATTTGGGCGGTTTGGTCCTCTTAAGGACATTTACTTGCCACGAGATTATTATT
CTGGTAACATACAATCTGTTTATGGAGTTTGGTTGTTTTTATTGAAAGTGTTGAAGACAACCAATGAAGTAATAAGAGTATCTTGTGGAAGACAAGAAGCAAGTAATTTG
TTTATTGTGTTGAAGACATTCAAAGAACCACGTGGTTTTGGATTTGTTCAGTTCGTTGATGCTGCTGATGCTGCCGATGCCAAGTATGAACTGGATGGCCAAGTTCTCCT
GGGTCGTGAATTAACTGTTGTGTTTGCGGAAGAGAACAGGAAGAGACCTGAAGAGATGAGAGCACGAGACTCATCAAGGGGTCGGTCCTACAGTTACAGCAACAGGCGCT
CCCCGTTGCGATATTCACAATCCCCGCACTATGATCGAAAATATTCTCGCAGTCCGGAGTATTATTCCCCTGCTCGGTCCAGACGATATTCAAGGTCAATCTCGCCAAGG
GACCGGAGGTACAGGGAGCAATCCTACTCGAGGTCACCATATAATTCAAGGGGCCGCAGTTACAGCCGAAGCAGGAGTCGTAGCTATAGTCGAAGCTATTCTAGGTGA
mRNA sequenceShow/hide mRNA sequence
CCGCGAAGTACAAAATCAAAGCCGAGGGAAGTTTCTCGAACATAAAATGGGCGTTCGAGGTAGAGAAGGCAAAAGCTGAAGGAACATCGGAGAATTTTGCTCTTCCAGAT
TGAACGAAAAGCCTCCGTTTGCTTTCTCAGTTCTCCGATTCTCAGGAAATAGAAAATGAGAGGTAGGAGTTACAGTTACAGTCCATCACCACCAAGGAGTTATGGCAGGA
GATATCGTAGCCCTAGTCCAAGGGGTCGGGGAGCTCGTAGAAGGGATCTGCCAACAAGTCTTTTGGTTAGGAACTTAAGGCATGATTGCAGGCCAGAGGACCTACGTGGA
TTATTTGGGCGGTTTGGTCCTCTTAAGGACATTTACTTGCCACGAGATTATTATTCTGGTAACATACAATCTGTTTATGGAGTTTGGTTGTTTTTATTGAAAGTGTTGAA
GACAACCAATGAAGTAATAAGAGTATCTTGTGGAAGACAAGAAGCAAGTAATTTGTTTATTGTGTTGAAGACATTCAAAGAACCACGTGGTTTTGGATTTGTTCAGTTCG
TTGATGCTGCTGATGCTGCCGATGCCAAGTATGAACTGGATGGCCAAGTTCTCCTGGGTCGTGAATTAACTGTTGTGTTTGCGGAAGAGAACAGGAAGAGACCTGAAGAG
ATGAGAGCACGAGACTCATCAAGGGGTCGGTCCTACAGTTACAGCAACAGGCGCTCCCCGTTGCGATATTCACAATCCCCGCACTATGATCGAAAATATTCTCGCAGTCC
GGAGTATTATTCCCCTGCTCGGTCCAGACGATATTCAAGGTCAATCTCGCCAAGGGACCGGAGGTACAGGGAGCAATCCTACTCGAGGTCACCATATAATTCAAGGGGCC
GCAGTTACAGCCGAAGCAGGAGTCGTAGCTATAGTCGAAGCTATTCTAGGTGAGTAAAAATACTTGGAAATTTTAAGAAGCCAGCTGATTTTTCTGAAGACCCAGAAACT
ATGATGCTATGATGTTAAGATATGTTCGGTATTTGGATTTGGGAGGCCTTGTATATGATTTAGAAAAATGCTTGGTTTAGAGCCAACTGATTTTATGCTCTAATTGAACA
AATTTATGAACTTCGTGGTTGTTTTCTCCTTGTAGAATGAAACTTGGGATTTTTAGACTTCCTCTAAAATACTCGTCAGTTGAATCTTGAGTGCTGTTAAAATTGAGAGT
ATATACTAGAAATTATATTAGATGTGATTTTGGAAAATGTGGAGAAAGTAAAGATCTGGTATTTTACTGTAAATAATAAATTTGTTTTAGTCTCTTATTTTCA
Protein sequenceShow/hide protein sequence
MRGRSYSYSPSPPRSYGRRYRSPSPRGRGARRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGNIQSVYGVWLFLLKVLKTTNEVIRVSCGRQEASNL
FIVLKTFKEPRGFGFVQFVDAADAADAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYSYSNRRSPLRYSQSPHYDRKYSRSPEYYSPARSRRYSRSISPR
DRRYREQSYSRSPYNSRGRSYSRSRSRSYSRSYSR