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CaUC10G195700 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G195700
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionFra a 1-associated protein
Genome locationCiama_Chr10:31096582..31099745
RNA-Seq ExpressionCaUC10G195700
SyntenyCaUC10G195700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136529.1 fra a 1-associated protein [Cucumis sativus]8.3e-8683.76Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS
        MGW WRD+T D DS A D  KFN S+ PSS+D CSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVI+SNKE TEEDVTDQM+NRSFS GS
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS

Query:  --SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPI-EDHEPVFFSDPKEPNSGHVDLSGLARDV
          SEHRP DFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNR+ SSS SMRRGIPI EDH+PVFF +PKEP+SGHVDLSGLARDV
Subjt:  --SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPI-EDHEPVFFSDPKEPNSGHVDLSGLARDV

XP_008442953.1 PREDICTED: uncharacterized protein LOC103486704 [Cucumis melo]1.0e-9187.63Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS
        MGW W D+TGDLDSSA DGAKF+ S+ PSS+DRCSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVIQSNKEFTEEDVTDQM+NRSF  GS
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV
        SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNR+ SS  SMRRGIPIEDH+P FFS+PKEP+SGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV

XP_022151462.1 uncharacterized protein LOC111019393 [Momordica charantia]1.9e-7779.38Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS
        MGW WRDE G+ D  AGD       S  SS DRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSNKEFTEEDV DQ++NRSFSSG+
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV
        S H+PF FPGLRSDI+AIE++LFGSMKGFFEAAEEIKNGFFG LRDP  F  E SSSPSMRRGIPIEDHE   FS P EP+SGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV

XP_023539788.1 uncharacterized protein LOC111800367 [Cucurbita pepo subsp. pepo]2.8e-7375.9Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMI-NRSFSSG
        MG  WR  +G+LDS AGDG   N  S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT++++ NRSFSSG
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMI-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPPLFNREPSSSPSMR+                EP+SGHVDLSGLARDV
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV

XP_038905970.1 fra a 1-associated protein [Benincasa hispida]3.4e-9590.72Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS
        MGW WRD+TG+LDSSA D AK N S+ PS +DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQM+NRSFS GS
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV
        SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNRE SSSPSMRRGIPIEDHEP FFS+ KEP+SGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV

TrEMBL top hitse value%identityAlignment
A0A0A0LGU7 Uncharacterized protein4.0e-8683.76Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS
        MGW WRD+T D DS A D  KFN S+ PSS+D CSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVI+SNKE TEEDVTDQM+NRSFS GS
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS

Query:  --SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPI-EDHEPVFFSDPKEPNSGHVDLSGLARDV
          SEHRP DFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNR+ SSS SMRRGIPI EDH+PVFF +PKEP+SGHVDLSGLARDV
Subjt:  --SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPI-EDHEPVFFSDPKEPNSGHVDLSGLARDV

A0A1S3B6X7 uncharacterized protein LOC1034867044.9e-9287.63Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS
        MGW W D+TGDLDSSA DGAKF+ S+ PSS+DRCSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVIQSNKEFTEEDVTDQM+NRSF  GS
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV
        SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNR+ SS  SMRRGIPIEDH+P FFS+PKEP+SGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV

A0A6J1DDK9 uncharacterized protein LOC1110193939.0e-7879.38Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS
        MGW WRDE G+ D  AGD       S  SS DRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSNKEFTEEDV DQ++NRSFSSG+
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV
        S H+PF FPGLRSDI+AIE++LFGSMKGFFEAAEEIKNGFFG LRDP  F  E SSSPSMRRGIPIEDHE   FS P EP+SGHVDLSGLARDV
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV

A0A6J1FHK7 uncharacterized protein LOC1114458455.1e-7375.38Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMI-NRSFSSG
        MG  WR  +G+LDS AGDG   N  S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT++++ NRSFSSG
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMI-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+REPSSSPSMR+                EP+SGHVDLSGLARDV
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV

A0A6J1KVN4 uncharacterized protein LOC1114986063.9e-7375.38Show/hide
Query:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMI-NRSFSSG
        MG  WR  +G+LDS AGDG   N  S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT++++ NRSFSSG
Subjt:  MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMI-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPP+FNREPSSSPSMR+                EP+SGHVDLSGLARDV
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV

SwissProt top hitse value%identityAlignment
W5X2N3 Fra a 1-associated protein3.9e-5456.28Show/hide
Query:  MGWAWRDET---GDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFS
        MGW W+D+    G ++ SA D       SP    DRCSTRKVV++QCKTEEVEPGKF+RKCE+TEE+LRDC+GRP+EV+QSNKE+TE+DVTDQ++  S S
Subjt:  MGWAWRDET---GDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFS

Query:  SGSSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSS-PSMRRGIPIEDHEPV-FFSDPKEPNSGHVDLSGLARDV
         GS+++  F+FPGL+ DID IE +  G +  FFEAAE++KNGFF S   P +F+  PS+S PS RR IPI+    +  F       SG VDLSGLARDV
Subjt:  SGSSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSS-PSMRRGIPIEDHEPV-FFSDPKEPNSGHVDLSGLARDV

Arabidopsis top hitse value%identityAlignment
AT2G35900.1 unknown protein9.3e-4349.76Show/hide
Query:  MGWAWRDET------GDL-DSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMIN
        MGW W D++       DL D   GD A        ++ + CST  VV+SQCKTEEVEPGKFVRKC++TEEILR C G+P EV+QSN E TEEDVTDQM+ 
Subjt:  MGWAWRDET------GDL-DSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMIN

Query:  RSFSSGSSEHR-PFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRR-GIPIEDHEPV--FFSDPKEP----NSGHV
        RS      E + P +FPGLR D+DAIE+     MK FF+AAEE+ +  F  + D           PS RR GIPIE+H  V    +D   P    +SG +
Subjt:  RSFSSGSSEHR-PFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRR-GIPIEDHEPV--FFSDPKEP----NSGHV

Query:  DLSGLARDV
        DLSGLA+DV
Subjt:  DLSGLARDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGGCCTGGAGAGATGAGACCGGCGATTTAGATTCATCCGCCGGCGATGGCGCTAAGTTCAATTATTCCAGCCCTCCGTCCTCCACCGATCGGTGTTCCACCAG
AAAAGTGGTGAAGTCGCAGTGCAAGACCGAGGAGGTTGAGCCCGGAAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATTGGAAGGCCGGTCG
AAGTGATACAGTCCAACAAGGAATTTACGGAAGAGGATGTAACGGATCAGATGATCAATAGGTCATTCTCATCGGGATCGTCAGAACATCGTCCATTTGATTTCCCTGGG
CTCCGTAGTGATATTGATGCCATTGAGCAGAGTCTCTTTGGTAGCATGAAGGGGTTCTTTGAAGCAGCTGAAGAGATTAAGAATGGTTTCTTTGGTTCTTTGAGAGATCC
ACCCCTATTCAACAGAGAGCCTTCATCCTCCCCCTCGATGAGACGAGGGATACCCATCGAAGATCATGAGCCAGTGTTCTTCTCTGACCCGAAAGAGCCCAATTCCGGTC
ACGTTGACCTATCTGGATTGGCCAGGGATGTCTAA
mRNA sequenceShow/hide mRNA sequence
CTTCAATCTCTCTCGCGTCTTCTCAAGCCGTGGCGCTCAAGAAAGACTCCACCGTAGAAGAGAATCTCGTAGAGGGGAAGAAGGTTCGCGATCTCGAGCTTTGAAAATGG
GATGGGCCTGGAGAGATGAGACCGGCGATTTAGATTCATCCGCCGGCGATGGCGCTAAGTTCAATTATTCCAGCCCTCCGTCCTCCACCGATCGGTGTTCCACCAGAAAA
GTGGTGAAGTCGCAGTGCAAGACCGAGGAGGTTGAGCCCGGAAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATTGGAAGGCCGGTCGAAGT
GATACAGTCCAACAAGGAATTTACGGAAGAGGATGTAACGGATCAGATGATCAATAGGTCATTCTCATCGGGATCGTCAGAACATCGTCCATTTGATTTCCCTGGGCTCC
GTAGTGATATTGATGCCATTGAGCAGAGTCTCTTTGGTAGCATGAAGGGGTTCTTTGAAGCAGCTGAAGAGATTAAGAATGGTTTCTTTGGTTCTTTGAGAGATCCACCC
CTATTCAACAGAGAGCCTTCATCCTCCCCCTCGATGAGACGAGGGATACCCATCGAAGATCATGAGCCAGTGTTCTTCTCTGACCCGAAAGAGCCCAATTCCGGTCACGT
TGACCTATCTGGATTGGCCAGGGATGTCTAAATGCCCTAAATGAACCTAATTGTCCCTTTTTTTCAGATGTTATATACGACGATTACACAGTACATTATCTTTATTTTTG
GTGGCTGTACATTTGGTAATCAATAAAATATACTCTTTAGTTTTCCTTC
Protein sequenceShow/hide protein sequence
MGWAWRDETGDLDSSAGDGAKFNYSSPPSSTDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMINRSFSSGSSEHRPFDFPG
LRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNREPSSSPSMRRGIPIEDHEPVFFSDPKEPNSGHVDLSGLARDV