; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC10G199380 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G199380
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr10:34734501..34739639
RNA-Seq ExpressionCaUC10G199380
SyntenyCaUC10G199380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027900.1 hypothetical protein SDJN02_09079, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2752.87Show/hide
Query:  CSSSVFWLLKKFTNLNPVHWVESCRWQYSDVETRFSSGSCYLCYYSGDQKSIIQYCPVLRYRINTLGLRILQPLSESSVLDRIVKHPRGLDGTTKESKVS
        C SSV WLLKKFTNL PVHWVE CR QY DV+T  SSGS YLCYYSGDQK                                       L+GT KESKV 
Subjt:  CSSSVFWLLKKFTNLNPVHWVESCRWQYSDVETRFSSGSCYLCYYSGDQKSIIQYCPVLRYRINTLGLRILQPLSESSVLDRIVKHPRGLDGTTKESKVS

Query:  L-SSSSLFSGEDCSGSPTKVRSICTCVMHIMPSPHIRKMMEASKMLGNMGDITHLSD
        L SSSSLFSGED SGS         CV HIMPSPH + MM ASKM+GNMG +  L D
Subjt:  L-SSSSLFSGEDCSGSPTKVRSICTCVMHIMPSPHIRKMMEASKMLGNMGDITHLSD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTGATCTTACTGCTACCACCGTGGTTCGTTGGCCAGGAAGCAATAGTTGGACTTAATTTAATGGCGTCCGCTTCTACAGTTCCACTTCCAATTCCTCCTTCGTT
TCTCAATATTTCTCCTTCCAGCCTCGTACTTCGCATCTTGTGTAAACTTTTTCCCAATGTCGACTTGCGAGGCGTTCAGGCCAGAAGTACTTGTTGTTCCTATGTCTCCT
CCAAAGAAAGATATAATTCGATGACCACGAGTTTGAAAGGACATTGGGAGCTTTATAATGGTGAAGTGGCCTTAACAGTCCACAGAGCTCGGAGACTGAATTATCTAAAA
ATGATTGCTTCTTTAAAGTACAGTTTACTATTTTTCTACTATTTTCTTAATGATAGGTTCTGTTTGAATCGTTGGGTAAAATCCTTGATACCTTCAAAGGTTAACTTTGG
AGTAAACGCTTTTTCATACATTTTTACATTTATTATCGTAGAGCTTTTCCTAATTCTAACTTGCAGCAGCTCGGTTTTCTGGCTTCTTAAAAAGTTCACCAATCTTAATC
CAGTCCACTGGGTAGAAAGCTGCAGGTGGCAATACAGTGACGTTGAAACCAGGTTTAGCTCTGGCTCCTGTTACCTTTGCTATTACTCTGGAGACCAGAAAAGCATTATT
CAGTATTGTCCAGTTCTTAGATACCGGATCAATACTTTAGGTTTAAGAATCTTGCAGCCTCTTTCTGAATCCAGCGTTCTTGATAGAATAGTTAAGCATCCACGGGGATT
GGATGGAACTACAAAGGAATCAAAAGTTTCACTATCATCATCATCTCTGTTTTCTGGTGAGGACTGCAGTGGCTCTCCAACTAAAGTCCGCTCAATTTGCACTTGTGTCA
TGCATATTATGCCATCTCCACATATAAGGAAGATGATGGAAGCAAGCAAGATGCTTGGCAATATGGGTGATATAACACACCTTTCAGACATTTCTCCCAGGAGGCTGTTC
CCACAAAAAGTGAAGTTTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTGATCTTACTGCTACCACCGTGGTTCGTTGGCCAGGAAGCAATAGTTGGACTTAATTTAATGGCGTCCGCTTCTACAGTTCCACTTCCAATTCCTCCTTCGTT
TCTCAATATTTCTCCTTCCAGCCTCGTACTTCGCATCTTGTGTAAACTTTTTCCCAATGTCGACTTGCGAGGCGTTCAGGCCAGAAGTACTTGTTGTTCCTATGTCTCCT
CCAAAGAAAGATATAATTCGATGACCACGAGTTTGAAAGGACATTGGGAGCTTTATAATGGTGAAGTGGCCTTAACAGTCCACAGAGCTCGGAGACTGAATTATCTAAAA
ATGATTGCTTCTTTAAAGTACAGTTTACTATTTTTCTACTATTTTCTTAATGATAGGTTCTGTTTGAATCGTTGGGTAAAATCCTTGATACCTTCAAAGGTTAACTTTGG
AGTAAACGCTTTTTCATACATTTTTACATTTATTATCGTAGAGCTTTTCCTAATTCTAACTTGCAGCAGCTCGGTTTTCTGGCTTCTTAAAAAGTTCACCAATCTTAATC
CAGTCCACTGGGTAGAAAGCTGCAGGTGGCAATACAGTGACGTTGAAACCAGGTTTAGCTCTGGCTCCTGTTACCTTTGCTATTACTCTGGAGACCAGAAAAGCATTATT
CAGTATTGTCCAGTTCTTAGATACCGGATCAATACTTTAGGTTTAAGAATCTTGCAGCCTCTTTCTGAATCCAGCGTTCTTGATAGAATAGTTAAGCATCCACGGGGATT
GGATGGAACTACAAAGGAATCAAAAGTTTCACTATCATCATCATCTCTGTTTTCTGGTGAGGACTGCAGTGGCTCTCCAACTAAAGTCCGCTCAATTTGCACTTGTGTCA
TGCATATTATGCCATCTCCACATATAAGGAAGATGATGGAAGCAAGCAAGATGCTTGGCAATATGGGTGATATAACACACCTTTCAGACATTTCTCCCAGGAGGCTGTTC
CCACAAAAAGTGAAGTTTTCATAA
Protein sequenceShow/hide protein sequence
MGLILLLPPWFVGQEAIVGLNLMASASTVPLPIPPSFLNISPSSLVLRILCKLFPNVDLRGVQARSTCCSYVSSKERYNSMTTSLKGHWELYNGEVALTVHRARRLNYLK
MIASLKYSLLFFYYFLNDRFCLNRWVKSLIPSKVNFGVNAFSYIFTFIIVELFLILTCSSSVFWLLKKFTNLNPVHWVESCRWQYSDVETRFSSGSCYLCYYSGDQKSII
QYCPVLRYRINTLGLRILQPLSESSVLDRIVKHPRGLDGTTKESKVSLSSSSLFSGEDCSGSPTKVRSICTCVMHIMPSPHIRKMMEASKMLGNMGDITHLSDISPRRLF
PQKVKFS