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CaUC10G199640 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC10G199640
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPhycobilisome rod-core linker polypeptide CpcG2 like
Genome locationCiama_Chr10:34995123..34997638
RNA-Seq ExpressionCaUC10G199640
SyntenyCaUC10G199640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935686.1 uncharacterized protein LOC111442470 [Cucurbita moschata]2.6e-2591.43Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIED+SNKAAQKKQELAEQ+KDLSKNFD+ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
XP_022949523.1 uncharacterized protein LOC111452848 [Cucurbita moschata]2.9e-2488.57Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEVLVNSLANSR+FQRFAVRTSKQIED+S KAAQKKQELAEQMKDLSKNF++ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
XP_022983627.1 uncharacterized protein LOC111482182 [Cucurbita maxima]7.6e-2590Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIED+SNKAA+KKQELAEQ+KDLSKNFD+ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
XP_023527736.1 uncharacterized protein LOC111790863 [Cucurbita pepo subsp. pepo]2.9e-2487.14Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEV+VNSLANSR FQRFAVRTSKQIED+SNKA+QKKQELAEQ+KDLSKNFD+ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
XP_038903248.1 uncharacterized protein LOC120089892 [Benincasa hispida]2.2e-2488.57Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEVLVNSLANSR FQRFAVRTSKQIE++SNKAAQKKQELAEQ+KDLSKNFD+ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
TrEMBL top hitse value%identityAlignment
A0A0A0L9U5 Uncharacterized protein9.1e-2485.71Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNF+HRV SYLVNEVLVNSLANSR+FQRFAVRTSKQIED+SNKAAQKKQELAEQ+KD SKNFD+ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
A0A6J1F5E7 uncharacterized protein LOC1114424701.3e-2591.43Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIED+SNKAAQKKQELAEQ+KDLSKNFD+ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
A0A6J1GCB5 uncharacterized protein LOC1114528481.4e-2488.57Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEVLVNSLANSR+FQRFAVRTSKQIED+S KAAQKKQELAEQMKDLSKNF++ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
A0A6J1I5H8 uncharacterized protein LOC1114701021.4e-2488.57Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEVLVNSLANSR+FQRFAVRTSKQIED+S KAAQKKQELAEQMKDLSKNF++ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
A0A6J1IZW4 uncharacterized protein LOC1114821823.7e-2590Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
        MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIED+SNKAA+KKQELAEQ+KDLSKNFD+ ++
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01350.1 unknown protein1.4e-1658.21Show/hide
Query:  GGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLR
        GGNF+ RV+SY+ NE +VN LANS AFQRFAVRTSK+IE+LS  AA+ ++++A+QM++ +KN D+ +
Subjt:  GGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGGAAATTTCATGCACAGAGTAGTGTCATACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGCCGTGCGTTTCAAAGGTTTGCCGTGAGGACATC
AAAGCAAATTGAGGATCTTTCTAACAAGGCTGCGCAGAAGAAGCAAGAACTTGCGGAACAAATGAAAGATCTCTCCAAAAATTTTGATAATTTGAGGTCTGTTTTTGGTT
ACCTGGTCACCGTTGCCTGTGATTGA
mRNA sequenceShow/hide mRNA sequence
TGTCAAGACTCTTGCGGCTTTCCTACAACCACGCACATTATAAATTAAGGCGAGAAGCCCGGCTGCCGCGTAGAGAGCTGGGTTGGCTTGCGATCGAGGAAAATTAGGGC
AACGAACCATTGTCATCAGCGACGATATTGTTTACGTAAACATTTCCTAACTTCATCTGTTTCGATCGACTTTCCTTGGTTGAAAATCTGCATCTAAAACCTTATTGATT
TGTTTTAATTTTTGGAAACGAGCATGGCGGGTGGAAATTTCATGCACAGAGTAGTGTCATACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGCCGTGCGTTT
CAAAGGTTTGCCGTGAGGACATCAAAGCAAATTGAGGATCTTTCTAACAAGGCTGCGCAGAAGAAGCAAGAACTTGCGGAACAAATGAAAGATCTCTCCAAAAATTTTGA
TAATTTGAGGTCTGTTTTTGGTTACCTGGTCACCGTTGCCTGTGATTGA
Protein sequenceShow/hide protein sequence
MAGGNFMHRVVSYLVNEVLVNSLANSRAFQRFAVRTSKQIEDLSNKAAQKKQELAEQMKDLSKNFDNLRSVFGYLVTVACD