CuGenDBv2

Gene ID	CaUC10G200020
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ATP-dependent helicase/deoxyribonuclease subunit B
Genome location	Ciama_Chr10:35272701..35282071
RNA-Seq Expression	CaUC10G200020
Synteny	CaUC10G200020
Gene Ontology terms	GO:0006979 - response to oxidative stress (biological process) GO:0009555 - pollen development (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004137681.1 uncharacterized protein LOC101203220 [Cucumis sativus]

5.0e-118

96.33

Show/hide

Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M  PP LSLL+SLLSL+PI LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPI+GVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILS+YILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_008442332.1 PREDICTED: uncharacterized protein LOC103486235 isoform X2 [Cucumis melo]

1.3e-118

97.25

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Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PP LSLL+SLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_022157271.1 uncharacterized protein LOC111024020 isoform X1 [Momordica charantia]

1.1e-115

93.58

Show/hide

Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        MG+P  LSLLV LL L+PIS+AYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIF VNREVLVPIPKPVGYTGADPYKISFQVGKEKFL+PWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
         EVPMIDVHLRYSGSDLHGVTAKV DMPHIYIDTHPHISKQFWDQQHWPKH+LVRYTWEEQSEIDVTSGLYVLFGSGLTL+FILSIYILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVE+SIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_023541018.1 uncharacterized protein LOC111801222 [Cucurbita pepo subsp. pepo]

1.1e-115

93.58

Show/hide

Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        MG+PPFL LLVSL SL+P  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
        A+VPMIDVHLRYSGSDLHGVTAKV+DMPHIY+D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL L+FILSIYILQSSK+KLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_038903796.1 uncharacterized protein LOC120090293 isoform X1 [Benincasa hispida]

8.6e-118

96.33

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Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        MG+PP LSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINR+S
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHISK+FWDQQHWPKHILVRYTWEEQSEIDV SGLYVLFGSGLTLSFILSI+ILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIP VGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9R0 Uncharacterized protein

2.4e-118

96.33

Show/hide

Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M  PP LSLL+SLLSL+PI LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPI+GVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILS+YILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A1S3B641 uncharacterized protein LOC103486235 isoform X2

6.4e-119

97.25

Show/hide

Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PP LSLL+SLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A5A7TLX6 Uncharacterized protein

6.4e-119

97.25

Show/hide

Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PP LSLL+SLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A6J1DXJ6 uncharacterized protein LOC111024020 isoform X1

5.1e-116

93.58

Show/hide

Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        MG+P  LSLLV LL L+PIS+AYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIF VNREVLVPIPKPVGYTGADPYKISFQVGKEKFL+PWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
         EVPMIDVHLRYSGSDLHGVTAKV DMPHIYIDTHPHISKQFWDQQHWPKH+LVRYTWEEQSEIDVTSGLYVLFGSGLTL+FILSIYILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVE+SIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A6J1I3H9 uncharacterized protein LOC111470204

5.1e-116

93.58

Show/hide

Query:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        MG+PPFL LLVSL SL+P  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV
        A+VPMIDVHLRYSGSDLHGVTAKV+DMPHIY+D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL L+FILSIYILQSSK+KLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51610.1 unknown protein

6.0e-93

76.7

Show/hide

Query:  SLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMID
        +L++  LS   +S AYRPGDIV MSKMGQYHSSRT WHD+IG+HCPIF VNREVL+PI KP+GYTG DPYKI FQVG EKFL+ WLLVINRKS+EVPMID
Subjt:  SLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMID

Query:  VHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFVRETVVES
        V+LRYSG DL GVTA+V+DMPH Y++THP I KQFWD QHWPKH+LVRYTW+EQSEIDV+SG YVLFGS LT SF+LSIY+LQSS++KLARFVRETVVES
Subjt:  VHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKDKLARFVRETVVES

Query:  SIPGVG
        S   VG
Subjt:  SIPGVG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACCGAAATAAAAGCCCAAATGGATCAGAAAGTAACGGGCCCAGCAAGGATCCCCACCAGTCCAAAAGGGAGAAGAGGGAAACCGTTTCCGTAGAGTTCCAATTCTT
CGAACGATTGGGCAAACTACCGTCGACCATGGGAGATCCTCCATTTCTATCTCTCCTCGTTTCGCTATTGTCGCTGGTTCCGATTTCGCTGGCTTACAGGCCCGGAGACA
TCGTTCCGATGAGCAAGATGGGACAGTATCACTCGTCCAGAACAGTTTGGCACGATATGATAGGTCGACATTGTCCAATTTTTGGCGTCAATCGCGAGGTTTTGGTTCCT
ATACCGAAACCGGTCGGCTACACAGGAGCTGATCCGTATAAAATATCCTTTCAAGTTGGAAAAGAGAAGTTTCTTGTCCCATGGCTTCTTGTGATAAATCGCAAAAGTGC
AGAAGTTCCAATGATTGATGTCCACTTGAGATACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAGTGGACATGCCTCATATCTATATTGATACACACCCACATA
TTAGCAAACAATTCTGGGATCAACAACATTGGCCAAAGCACATCCTTGTCCGTTATACATGGGAGGAGCAATCAGAGATTGATGTGACTTCTGGATTATATGTTTTGTTC
GGATCAGGTCTTACGCTATCTTTTATTCTGTCGATTTACATTTTGCAATCATCGAAGGACAAGTTAGCAAGGTTTGTAAGAGAAACAGTAGTTGAAAGCAGCATTCCTGG
CGTAGGAGTGGCAAAAGTCGAATAG

mRNA sequence

Show/hide mRNA sequence

ACAGATGGACCGAAATAAAAGCCCAAATGGATCAGAAAGTAACGGGCCCAGCAAGGATCCCCACCAGTCCAAAAGGGAGAAGAGGGAAACCGTTTCCGTAGAGTTCCAAT
TCTTCGAACGATTGGGCAAACTACCGTCGACCATGGGAGATCCTCCATTTCTATCTCTCCTCGTTTCGCTATTGTCGCTGGTTCCGATTTCGCTGGCTTACAGGCCCGGA
GACATCGTTCCGATGAGCAAGATGGGACAGTATCACTCGTCCAGAACAGTTTGGCACGATATGATAGGTCGACATTGTCCAATTTTTGGCGTCAATCGCGAGGTTTTGGT
TCCTATACCGAAACCGGTCGGCTACACAGGAGCTGATCCGTATAAAATATCCTTTCAAGTTGGAAAAGAGAAGTTTCTTGTCCCATGGCTTCTTGTGATAAATCGCAAAA
GTGCAGAAGTTCCAATGATTGATGTCCACTTGAGATACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAGTGGACATGCCTCATATCTATATTGATACACACCCA
CATATTAGCAAACAATTCTGGGATCAACAACATTGGCCAAAGCACATCCTTGTCCGTTATACATGGGAGGAGCAATCAGAGATTGATGTGACTTCTGGATTATATGTTTT
GTTCGGATCAGGTCTTACGCTATCTTTTATTCTGTCGATTTACATTTTGCAATCATCGAAGGACAAGTTAGCAAGGTTTGTAAGAGAAACAGTAGTTGAAAGCAGCATTC
CTGGCGTAGGAGTGGCAAAAGTCGAATAGACCCTAAGTGGTGAAGGGGGAGGGAGTTCACGGAAACACTTGCATAATATTAAGCTCCGCGTTGGCGTGGCGCTACCCATT
CAAGTTGAACCTATAATCACACAATCAGATTGGTCCTTCCAGAGGGTTAAAAAGCGGTATGCAACTTGCACATTTCTTTTAGAGACAAAATTTAACTCTTTATCTGTAAG
GTGTATGTAACTTGGAGGACATCGGTCTACGTCTACCTCAAAAAAGTCTAATATTACGGAACCCCATATTTTGATTTTCTAGGTCGGGGGAAGAATCTTTTTCTTTTCTT
TTTTCCATTTTTTTTTCTTCTGTAAATGCGACTAAAGACTAGTTAGGTAATTCTACTTTAGGTAATTCTACTTTACACCCTTGTACTTTCTGTCCCTATTGTATTTCTCC
CTTACTGGCATCTCTTTCTGAAAGCTTCAAATTTTATTTT

Protein sequence

Show/hide protein sequence

MDRNKSPNGSESNGPSKDPHQSKREKRETVSVEFQFFERLGKLPSTMGDPPFLSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVP
IPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLF
GSGLTLSFILSIYILQSSKDKLARFVRETVVESSIPGVGVAKVE

CaUC10G200020 (gene) of Watermelon (USVL246-FR2) v1 genome