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CaUC11G200620 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G200620
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLate embryogenesis abundant protein group 8 protein
Genome locationCiama_Chr11:275216..275844
RNA-Seq ExpressionCaUC11G200620
SyntenyCaUC11G200620
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]2.0e-3388.76Show/hide
Query:  EEQPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        EEQ Q QMMGK E+KAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN    GGGTDAPTLSGSG+PEV+PTTIDVVTKQGLI
Subjt:  EEQPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

KAE8649966.1 hypothetical protein Csa_012992 [Cucumis sativus]3.4e-3384.95Show/hide
Query:  MSNSEEQPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        MSN EEQ Q QMMGK E+KAPVEDLLPLESSPYVKYKDLEEYKRKGYG EGHL PKPN    GGGTDAPTLSGSG PEV+PTTID+VTKQGLI
Subjt:  MSNSEEQPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]5.0e-3278.35Show/hide
Query:  EKMSNSEEQPQQQMMGKR-EDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP
        E+ + ++ QPQ + MGKR E+KA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPN G GGGGTDAPTLSG+GFPEVKP+TIDV T QGLIP
Subjt:  EKMSNSEEQPQQQMMGKR-EDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]5.1e-2977.89Show/hide
Query:  MSNSEE--QPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        MSNSEE  Q QQQ++ ++E+K  VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN    GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  MSNSEE--QPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]1.0e-2978.95Show/hide
Query:  MSNSEE--QPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        MSNSEE  Q QQQ++ ++E+KA VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN    GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  MSNSEE--QPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein9.8e-4257.46Show/hide
Query:  RYVMHRHRNRQPPPRSFFFFFLGPLCINHRSLSILDCQFSLWLWGSEGRAGQMGAELLETHGHNCSLYLRVVNISKRVCSEREREMEKMSNSEEQPQQQM
        RYVMH HRNRQPPPRSFF                            E RAGQ GAELLETHGHN  LYLR++                            
Subjt:  RYVMHRHRNRQPPPRSFFFFFLGPLCINHRSLSILDCQFSLWLWGSEGRAGQMGAELLETHGHNCSLYLRVVNISKRVCSEREREMEKMSNSEEQPQQQM

Query:  MGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
            E+KAPVEDLLPLESSPYVKYKDLEEYKRKGYG EGHL PKPN    GGGTDAPTLSGSG PEV+PTTID+VTKQGLI
Subjt:  MGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein9.8e-3488.76Show/hide
Query:  EEQPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        EEQ Q QMMGK E+KAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN    GGGTDAPTLSGSG+PEV+PTTIDVVTKQGLI
Subjt:  EEQPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

A0A6J1C2A9 uncharacterized protein LOC1110076212.4e-3278.35Show/hide
Query:  EKMSNSEEQPQQQMMGKR-EDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP
        E+ + ++ QPQ + MGKR E+KA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPN G GGGGTDAPTLSG+GFPEVKP+TIDV T QGLIP
Subjt:  EKMSNSEEQPQQQMMGKR-EDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP

A0A6J1FA12 uncharacterized protein LOC1114436392.5e-2977.89Show/hide
Query:  MSNSEE--QPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI
        MSNSEE  Q QQQ++ ++E+K  VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPN    GGGTDAPTLSGSGFPEVKP TID VT  GL+
Subjt:  MSNSEE--QPQQQMMGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLI

A0A7J7C4J8 Uncharacterized protein2.3e-1453.76Show/hide
Query:  MSNSEEQPQQQMMGKRED-KAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGL
        MSN  EQ  Q+   + E  K  V + LP+ESSPYVKY +LE+YKRK YG EGHL   PN  GGGGGTDAPT+SGSG  + K   +D   + G+
Subjt:  MSNSEEQPQQQMMGKRED-KAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 61.4e-0843.37Show/hide
Query:  KREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL
        ++E K    D L    +PY+ Y +LE+YK KGYGA+GH EPK   G GGG TDAPT S     G G      ++ D + +QG+
Subjt:  KREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL

AT2G23110.2 Late embryogenesis abundant protein, group 61.4e-0843.37Show/hide
Query:  KREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL
        ++E K    D L    +PY+ Y +LE+YK KGYGA+GH EPK   G GGG TDAPT S     G G      ++ D + +QG+
Subjt:  KREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLS-----GSGFPEVKPTTIDVVTKQGL

AT2G23120.1 Late embryogenesis abundant protein, group 61.7e-0665.12Show/hide
Query:  SPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSG
        SPY+    LE+YK K YGAEGH EP P  G GGG TDAPT SG
Subjt:  SPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 65.2e-1153.85Show/hide
Query:  MGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFP
        M K E+K      LPLE+SPY KY+D+E+YK+  YG  GH + KP H  GGG TDAPT SG   P
Subjt:  MGKREDKAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTTATGTAATGCATAGACACAGAAACAGACAGCCACCGCCACGCAGCTTCTTCTTCTTCTTCTTGGGTCCCCTCTGCATTAATCATCGGTCACTTTCAATCCTCGACTG
CCAGTTTAGTTTGTGGTTGTGGGGCTCAGAGGGGAGAGCGGGTCAAATGGGAGCTGAACTTTTGGAAACACATGGACATAATTGCTCCCTTTATTTAAGGGTTGTGAATA
TAAGTAAAAGGGTCTGTTCAGAGAGAGAGAGAGAGATGGAGAAAATGTCGAATAGCGAAGAGCAACCACAGCAGCAAATGATGGGGAAGAGAGAAGATAAGGCTCCGGTG
GAAGATTTGCTGCCATTGGAGAGCAGTCCGTACGTGAAATACAAAGACTTGGAAGAGTACAAAAGGAAAGGTTATGGGGCGGAGGGGCATCTTGAGCCCAAGCCCAATCA
CGGCGGCGGCGGCGGCGGCACTGATGCACCCACCTTGTCCGGCAGCGGCTTCCCGGAGGTGAAGCCCACCACCATTGACGTCGTCACCAAACAAGGCCTTATTCCCTGA
mRNA sequenceShow/hide mRNA sequence
CGTTATGTAATGCATAGACACAGAAACAGACAGCCACCGCCACGCAGCTTCTTCTTCTTCTTCTTGGGTCCCCTCTGCATTAATCATCGGTCACTTTCAATCCTCGACTG
CCAGTTTAGTTTGTGGTTGTGGGGCTCAGAGGGGAGAGCGGGTCAAATGGGAGCTGAACTTTTGGAAACACATGGACATAATTGCTCCCTTTATTTAAGGGTTGTGAATA
TAAGTAAAAGGGTCTGTTCAGAGAGAGAGAGAGAGATGGAGAAAATGTCGAATAGCGAAGAGCAACCACAGCAGCAAATGATGGGGAAGAGAGAAGATAAGGCTCCGGTG
GAAGATTTGCTGCCATTGGAGAGCAGTCCGTACGTGAAATACAAAGACTTGGAAGAGTACAAAAGGAAAGGTTATGGGGCGGAGGGGCATCTTGAGCCCAAGCCCAATCA
CGGCGGCGGCGGCGGCGGCACTGATGCACCCACCTTGTCCGGCAGCGGCTTCCCGGAGGTGAAGCCCACCACCATTGACGTCGTCACCAAACAAGGCCTTATTCCCTGA
Protein sequenceShow/hide protein sequence
RYVMHRHRNRQPPPRSFFFFFLGPLCINHRSLSILDCQFSLWLWGSEGRAGQMGAELLETHGHNCSLYLRVVNISKRVCSEREREMEKMSNSEEQPQQQMMGKREDKAPV
EDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNHGGGGGGTDAPTLSGSGFPEVKPTTIDVVTKQGLIP