; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G200650 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G200650
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRING-H2 finger protein ATL80
Genome locationCiama_Chr11:289020..289899
RNA-Seq ExpressionCaUC11G200650
SyntenyCaUC11G200650
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608649.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]2.5e-9293.41Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLA  NSS+ISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEF VGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNG TESRVK+EG+DK N
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

XP_004145558.1 RING-H2 finger protein ATL8 [Cucumis sativus]3.4e-9497.25Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGA STRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVKEEGDDKTN
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

XP_008453009.1 PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo]5.0e-9396.15Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG GA STRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEFAVGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVKEEGDDKTN
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

XP_022941514.1 RING-H2 finger protein ATL80-like [Cucurbita moschata]3.2e-9293.41Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MR FRYLA  NSS+ISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEF VGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVK+EG+DK N
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

XP_038898612.1 RING-H2 finger protein ATL8 [Benincasa hispida]3.7e-9696.24Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSAISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTR PPPPASNKGLKKKILRSLPKYTFTAEFSAQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTNSRSG
        SDCAICLAEF VGDEIRVLPQCGHGFHMSCID WFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVKEEGDDKTNS  G
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTNSRSG

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y2 RING-type domain-containing protein1.7e-9497.25Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGA STRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVKEEGDDKTN
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

A0A1S3BWC1 RING-H2 finger protein ATL802.4e-9396.15Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG GA STRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEFAVGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVKEEGDDKTN
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

A0A5A7VGL3 RING-H2 finger protein ATL802.4e-9396.15Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG GA STRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEFAVGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVKEEGDDKTN
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

A0A6J1FA06 RING-H2 finger protein ATL80-like1.0e-9193.41Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSAISD+AEP+ YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAG+  G ASTRPPPPPASNKGLKKKILRSLPKY FTAEFSAQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEFAVGDEIRVLPQCGHGFH+SCID WFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVKEEGDDKT+
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

A0A6J1FNK0 RING-H2 finger protein ATL80-like1.6e-9293.41Show/hide
Query:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MR FRYLA  NSS+ISDT EPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        SDCAICLAEF VGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNG TESRVK+EG+DK N
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL441.3e-3555.32Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEI
        +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L+SLP+ TFTA  S           ++CAICL +FA G+EI
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEI

Query:  RVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCG
        RVLP CGH FH+ CID W  S SSCPSCR+IL   +C +CG
Subjt:  RVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCG

Q8LC69 RING-H2 finger protein ATL82.3e-5357.46Show/hide
Query:  FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFS
        FR L   NS++ ++ + P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     +  T PPP  A+NKGLKKK+LRSLPK T++ +   + +  
Subjt:  FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        +CAICL EFA GDE+RVLPQCGHGFH+SCIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K+  D   N
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

Q9LM69 RING-H2 finger protein ATL801.2e-5257.14Show/hide
Query:  FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD----GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--S
        FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA       G    +  PP  A+NKGLKKK+L+SLPK TF+ E   S
Subjt:  FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD----GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--S

Query:  AQFSDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVK---EEGDDKTNS
         +F++CAICLAEF+ GDE+RVLPQCGHGFH++CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   +E  ++   ++G+D  NS
Subjt:  AQFSDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVK---EEGDDKTNS

Q9LZV8 RING-H2 finger protein ATL746.0e-2549.61Show/hide
Query:  YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIRVLPQC
        +D++ VIILAALLCALI  LGL ++ RCA        G G +S+      A   GLKK+ L+  P   + + E     ++CAICL EFA G+ +RVLP C
Subjt:  YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIRVLPQC

Query:  GHGFHMSCIDTWFRSHSSCPSCRQILV
         H FHMSCIDTW  SHSSCP+CR  L+
Subjt:  GHGFHMSCIDTWFRSHSSCPSCRQILV

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL459.0e-3748.21Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSA----------------QFSDCAICLA
        ++D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L++LPK T+TA  S                   ++CAIC+ 
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSA----------------QFSDCAICLA

Query:  EFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEE
        EF+ G+EIR+LP C H FH++CID W  S SSCPSCR+ILV  +C +CG   +++      E++VK++
Subjt:  EFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEE

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein8.3e-5457.14Show/hide
Query:  FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD----GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--S
        FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA       G    +  PP  A+NKGLKKK+L+SLPK TF+ E   S
Subjt:  FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD----GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--S

Query:  AQFSDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVK---EEGDDKTNS
         +F++CAICLAEF+ GDE+RVLPQCGHGFH++CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   +E  ++   ++G+D  NS
Subjt:  AQFSDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVK---EEGDDKTNS

AT1G76410.1 RING/U-box superfamily protein1.7e-5457.46Show/hide
Query:  FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFS
        FR L   NS++ ++ + P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     +  T PPP  A+NKGLKKK+LRSLPK T++ +   + +  
Subjt:  FRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN
        +CAICL EFA GDE+RVLPQCGHGFH+SCIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K+  D   N
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTN

AT2G17450.1 RING-H2 finger A3A9.2e-3755.32Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEI
        +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L+SLP+ TFTA  S           ++CAICL +FA G+EI
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEI

Query:  RVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCG
        RVLP CGH FH+ CID W  S SSCPSCR+IL   +C +CG
Subjt:  RVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCG

AT4G35480.1 RING-H2 finger A3B6.4e-3848.21Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSA----------------QFSDCAICLA
        ++D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L++LPK T+TA  S                   ++CAIC+ 
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSA----------------QFSDCAICLA

Query:  EFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEE
        EF+ G+EIR+LP C H FH++CID W  S SSCPSCR+ILV  +C +CG   +++      E++VK++
Subjt:  EFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEE

AT5G01880.1 RING/U-box superfamily protein4.3e-2649.61Show/hide
Query:  YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIRVLPQC
        +D++ VIILAALLCALI  LGL ++ RCA        G G +S+      A   GLKK+ L+  P   + + E     ++CAICL EFA G+ +RVLP C
Subjt:  YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIRVLPQC

Query:  GHGFHMSCIDTWFRSHSSCPSCRQILV
         H FHMSCIDTW  SHSSCP+CR  L+
Subjt:  GHGFHMSCIDTWFRSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCCCTTCAGGTACCTTGCCGGCGTCAACTCCTCCGCCATCTCCGACACGGCTGAGCCCGAGAGGTATGACTCTGACTTCGTCATAATCCTCGCCGCCCTCCTCTG
TGCCTTGATTTGCGTTCTTGGTCTTGTTGCTGTTGCCCGCTGCGCCTGGCTACGCCATCTCGCCGGCGATGGGGGCGGCGCTGCTTCCACTCGTCCTCCTCCGCCTCCTG
CCTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACACCTTCACCGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTC
GCTGTCGGAGATGAAATCCGGGTGCTGCCGCAGTGTGGCCATGGATTTCACATGTCCTGCATCGATACGTGGTTTCGATCTCACTCATCCTGTCCTTCCTGCCGTCAGAT
TCTGGTGGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCAGCGAGCTCGAGTTCGAACGGTGTGACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAATAGCC
GTTCTGGTAGTTCTGTTTGTGTTGTGAATATTGACTTCAAATCTGTCGTCGATCTTCAGCCGAGATGGCATAACTTTACAGTACAGGCGATGAATTCAAAAAGGGGAACA
GTATCAGCATCATGTGGATGGTGGACATTGCAACTGCCAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCCCTTCAGGTACCTTGCCGGCGTCAACTCCTCCGCCATCTCCGACACGGCTGAGCCCGAGAGGTATGACTCTGACTTCGTCATAATCCTCGCCGCCCTCCTCTG
TGCCTTGATTTGCGTTCTTGGTCTTGTTGCTGTTGCCCGCTGCGCCTGGCTACGCCATCTCGCCGGCGATGGGGGCGGCGCTGCTTCCACTCGTCCTCCTCCGCCTCCTG
CCTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACACCTTCACCGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTC
GCTGTCGGAGATGAAATCCGGGTGCTGCCGCAGTGTGGCCATGGATTTCACATGTCCTGCATCGATACGTGGTTTCGATCTCACTCATCCTGTCCTTCCTGCCGTCAGAT
TCTGGTGGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCAGCGAGCTCGAGTTCGAACGGTGTGACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAATAGCC
GTTCTGGTAGTTCTGTTTGTGTTGTGAATATTGACTTCAAATCTGTCGTCGATCTTCAGCCGAGATGGCATAACTTTACAGTACAGGCGATGAATTCAAAAAGGGGAACA
GTATCAGCATCATGTGGATGGTGGACATTGCAACTGCCAATGTGA
Protein sequenceShow/hide protein sequence
MRPFRYLAGVNSSAISDTAEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEF
AVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGVTESRVKEEGDDKTNSRSGSSVCVVNIDFKSVVDLQPRWHNFTVQAMNSKRGT
VSASCGWWTLQLPM