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CaUC11G200740 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G200740
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionFanconi anemia group J protein-like protein isoform X1
Genome locationCiama_Chr11:346039..346494
RNA-Seq ExpressionCaUC11G200740
SyntenyCaUC11G200740
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (molecular function)
InterPro domainsIPR014013 - Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR045028 - Helicase superfamily 1/2, DinG/Rad3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064650.1 Fanconi anemia group J protein-like protein isoform X1 [Cucumis melo var. makuwa]4.2e-6985.33Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGG  PKSK N TY+L KNVY +GGI VEFPFRPYGSQL FMGRVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQ+ANSCH
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIV
         KPAPEA TDPLGFGGGFIPEVQPSSKFACL+P HPNI  ARIR  GQ++
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIV

KAE8649965.1 hypothetical protein Csa_012287 [Cucumis sativus]9.7e-6683.78Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGG  PKSK N TY+L KNVY IGG+QVEFPFRPYGSQL FM RVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKN+KIKNQ+AN CH
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQ
        ++PAPEAAT+PLGFGGGFIPEVQPSSK AC +P HPNI NARIR  GQ
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQ

TYK19941.1 Fanconi anemia group J protein-like protein isoform X8 [Cucumis melo var. makuwa]1.9e-6985.43Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGG  PKSK N TY+L KNVY +GGI VEFPFRPYGSQL FMGRVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQ+ANSCH
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIVT
         KPAPEA TDPLGFGGGFIPEVQPSSKFACL+P HPNI  ARIR  GQ+ T
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIVT

XP_008452980.1 PREDICTED: Fanconi anemia group J protein-like isoform X1 [Cucumis melo]3.8e-6294.4Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGGTNPKSK NPTYQLTKNVYPIGGIQVEFP+RPYGSQLAFMGRVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQ+ANS H
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPS
        +KPAPEAATDPLGFGGGFIPEVQ S
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPS

XP_038897855.1 Fanconi anemia group J protein homolog isoform X1 [Benincasa hispida]7.7e-6395.2Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGGTNP+SK NPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQ+ANSCH
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPS
         KPAPEAATD LGFGGGFIPEVQPS
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPS

TrEMBL top hitse value%identityAlignment
A0A0A0L4M2 Helicase ATP-binding domain-containing protein6.4e-7187.33Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGGTNPKSK NPTYQLTKNVYPIGGIQVEFPFRPYGSQL FM RVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKN +AN CH
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIV
        +K APEAATDPLGFGGGFIPEVQ  SKFACL+P +PNI NARI+ SGQ++
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIV

A0A5A7VBV8 Fanconi anemia group J protein-like protein isoform X12.0e-6985.33Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGG  PKSK N TY+L KNVY +GGI VEFPFRPYGSQL FMGRVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQ+ANSCH
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIV
         KPAPEA TDPLGFGGGFIPEVQPSSKFACL+P HPNI  ARIR  GQ++
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIV

A0A5A7VGK5 Fanconi anemia group J protein-like isoform X11.9e-6294.4Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGGTNPKSK NPTYQLTKNVYPIGGIQVEFP+RPYGSQLAFMGRVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQ+ANS H
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPS
        +KPAPEAATDPLGFGGGFIPEVQ S
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPS

A0A5D3D8P7 Fanconi anemia group J protein-like protein isoform X89.2e-7085.43Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGG  PKSK N TY+L KNVY +GGI VEFPFRPYGSQL FMGRVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQ+ANSCH
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIVT
         KPAPEA TDPLGFGGGFIPEVQPSSKFACL+P HPNI  ARIR  GQ+ T
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIVT

A0A5D3D8S9 Fanconi anemia group J protein-like isoform X11.9e-6294.4Show/hide
Query:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH
        MVYAKGGTNPKSK NPTYQLTKNVYPIGGIQVEFP+RPYGSQLAFMGRVISTLDRAQREG CHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQ+ANS H
Subjt:  MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCH

Query:  SKPAPEAATDPLGFGGGFIPEVQPS
        +KPAPEAATDPLGFGGGFIPEVQ S
Subjt:  SKPAPEAATDPLGFGGGFIPEVQPS

SwissProt top hitse value%identityAlignment
B3MSG8 Regulator of telomere elongation helicase 1 homolog8.4e-1245.54Show/hide
Query:  IGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPEVQPSS
        I GI V FPF PY  Q A+M +VI  L    ++G  + +LESPTGTGK+LSLLCSSLAW +  + ++Q+      K A     D LG G G  PE+   +
Subjt:  IGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPEVQPSS

Query:  K
        K
Subjt:  K

F4HQE2 Regulator of telomere elongation helicase 1 homolog1.6e-1543.93Show/hide
Query:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQK---NYKIKNQEANSCHS-KPAPEAATDPLGFGGGFIP
        Y I GI VEFPF  Y SQ+ +M RVI +L     + +CHALLESPTGTGK+L LLC++LAW+K   ++  +    NS      + E  +   G GGG  P
Subjt:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQK---NYKIKNQEANSCHS-KPAPEAATDPLGFGGGFIP

Query:  EVQPSSK
         +  +S+
Subjt:  EVQPSSK

Q3YK19 Fanconi anemia group J protein homolog2.0e-1344.83Show/hide
Query:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDP
        Y IGG+++ FP + Y SQLA M  ++  L+  Q     H LLESPTG+GKSL+LLCS+L+WQ++   K+   +SC  +    AA+ P
Subjt:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDP

Q5SXJ3 Fanconi anemia group J protein homolog5.8e-1341.51Show/hide
Query:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPEVQP
        Y IGG+++ FP R Y +QLA M  ++  L+ +Q     H LLESPTG+GKSL+LLCS+LAWQ+          S   KP  E             PE  P
Subjt:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPEVQP

Query:  SSKFAC
        S   AC
Subjt:  SSKFAC

Q9BX63 Fanconi anemia group J protein9.9e-1342.45Show/hide
Query:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPEVQP
        Y IGG+++ FP++ Y SQLA M  ++  L+  Q     H LLESPTG+GKSL+LLCS+LAWQ+          S   KPA E  ++          EVQ 
Subjt:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPEVQP

Query:  SSKFAC
        S   AC
Subjt:  SSKFAC

Arabidopsis top hitse value%identityAlignment
AT1G20720.1 RAD3-like DNA-binding helicase protein1.9e-4378.85Show/hide
Query:  KNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPE
        KNVY IGG+QVEFP++PYG+QLAFM RVISTLDRAQR+G CHALLESPTGTGKSLSLLCS LAWQ+NYK +  + N  HSK APEAATDPL  GGGFIPE
Subjt:  KNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPE

Query:  VQPS
         QPS
Subjt:  VQPS

AT1G20750.1 RAD3-like DNA-binding helicase protein3.7e-3175Show/hide
Query:  KNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAP
        KNVY IGG+QVEFP++PYG+QLAFM RVISTLDRAQR+G  HALLESPTGTGKSLSLLCS LAWQK+YK +    N  HSK  P
Subjt:  KNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAP

AT1G79890.1 RAD3-like DNA-binding helicase protein4.4e-0845.76Show/hide
Query:  FPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIK
        FP++PY  Q+ FM  +   LD+        ++LESPTGTGKSLS++CS+L W  + K K
Subjt:  FPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIK

AT1G79950.1 RAD3-like DNA-binding helicase protein1.2e-1643.93Show/hide
Query:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQK---NYKIKNQEANSCHS-KPAPEAATDPLGFGGGFIP
        Y I GI VEFPF  Y SQ+ +M RVI +L     + +CHALLESPTGTGK+L LLC++LAW+K   ++  +    NS      + E  +   G GGG  P
Subjt:  YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQK---NYKIKNQEANSCHS-KPAPEAATDPLGFGGGFIP

Query:  EVQPSSK
         +  +S+
Subjt:  EVQPSSK

AT2G05635.1 DNA repair DEAD helicase RAD3/XP-D subfamily protein2.5e-1162Show/hide
Query:  KSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPEVQ
        +S +  CS LAWQ+NYK +  + N  HSK APEAATDPL  GGGFIPE Q
Subjt:  KSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATDPLGFGGGFIPEVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTATGCAAAAGGGGGGACGAACCCTAAATCCAAGGCTAATCCGACTTATCAGCTCACGAAGAATGTGTACCCGATTGGTGGCATCCAAGTGGAATTCCCATTCCG
ACCATACGGTTCGCAGCTCGCGTTCATGGGCAGAGTTATATCCACCCTTGATCGAGCCCAGCGAGAGGGCCGTTGCCACGCATTGCTGGAATCTCCGACTGGAACCGGGA
AGTCGCTTTCACTTCTGTGCTCGAGCCTCGCTTGGCAGAAGAACTACAAGATAAAGAATCAGGAGGCTAATTCCTGTCACTCTAAGCCCGCTCCAGAGGCTGCCACAGAT
CCTCTCGGTTTTGGCGGTGGATTTATTCCTGAAGTGCAGCCGTCAAGTAAGTTTGCATGTCTTCACCCTGGTCATCCGAACATCTTGAACGCACGAATTCGATCGAGTGG
TCAGATAGTGACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTATGCAAAAGGGGGGACGAACCCTAAATCCAAGGCTAATCCGACTTATCAGCTCACGAAGAATGTGTACCCGATTGGTGGCATCCAAGTGGAATTCCCATTCCG
ACCATACGGTTCGCAGCTCGCGTTCATGGGCAGAGTTATATCCACCCTTGATCGAGCCCAGCGAGAGGGCCGTTGCCACGCATTGCTGGAATCTCCGACTGGAACCGGGA
AGTCGCTTTCACTTCTGTGCTCGAGCCTCGCTTGGCAGAAGAACTACAAGATAAAGAATCAGGAGGCTAATTCCTGTCACTCTAAGCCCGCTCCAGAGGCTGCCACAGAT
CCTCTCGGTTTTGGCGGTGGATTTATTCCTGAAGTGCAGCCGTCAAGTAAGTTTGCATGTCTTCACCCTGGTCATCCGAACATCTTGAACGCACGAATTCGATCGAGTGG
TCAGATAGTGACATAG
Protein sequenceShow/hide protein sequence
MVYAKGGTNPKSKANPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGRCHALLESPTGTGKSLSLLCSSLAWQKNYKIKNQEANSCHSKPAPEAATD
PLGFGGGFIPEVQPSSKFACLHPGHPNILNARIRSSGQIVT