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CaUC11G201300 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G201300
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionbeta-glucosidase 18-like
Genome locationCiama_Chr11:879934..880531
RNA-Seq ExpressionCaUC11G201300
SyntenyCaUC11G201300
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR001360 - Glycoside hydrolase family 1
IPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453064.2 PREDICTED: beta-glucosidase 18-like, partial [Cucumis melo]4.0e-0552.63Show/hide
Query:  WPPKSTHFPSL----FSSSFCFPLIRVLPFPSSSSS---SSSSSLFFCF---WIEGGYDEDGRGLSNWDVFSHIPG
        W PKST +PS     FSSSF FPL +VLP    S      + SSL        ++GG+ EDGRG SNWDVFSHIPG
Subjt:  WPPKSTHFPSL----FSSSFCFPLIRVLPFPSSSSS---SSSSSLFFCF---WIEGGYDEDGRGLSNWDVFSHIPG
TrEMBL top hitse value%identityAlignment
A0A1S3BVA7 beta-glucosidase 18-like1.9e-0552.63Show/hide
Query:  WPPKSTHFPSL----FSSSFCFPLIRVLPFPSSSSS---SSSSSLFFCF---WIEGGYDEDGRGLSNWDVFSHIPG
        W PKST +PS     FSSSF FPL +VLP    S      + SSL        ++GG+ EDGRG SNWDVFSHIPG
Subjt:  WPPKSTHFPSL----FSSSFCFPLIRVLPFPSSSSS---SSSSSLFFCF---WIEGGYDEDGRGLSNWDVFSHIPG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTCAGAATCCAGAGTTGGGTACGATCACCATGGCCACCAAAATCCACACATTTTCCTTCTCTTTTTTCCTCATCCTTTTGCTTTCCTCTCATCAGGGTACTTCC
TTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTATTTTTCTGTTTCTGGATTGAAGGGGGTTATGATGAAGATGGGAGGGGTTTGAGTAATTGGGATGTCTTTT
CTCATATTCCAGGTCCAACCCATCTCCTAATTTCTCATTCCCATTCAAACCCACTTCCCCATTCTCCCTATAATTTTTCTAATTTTTTTCCAAATTTCCAGGAAAAATCA
AGAACAACGACACCGGAGATGTGGCCGACGATCACTACCACCGGTTTCTGGTACTTGTTTAATTTATGGCCGGATGTACCGGAGTCATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTCAGAATCCAGAGTTGGGTACGATCACCATGGCCACCAAAATCCACACATTTTCCTTCTCTTTTTTCCTCATCCTTTTGCTTTCCTCTCATCAGGGTACTTCC
TTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTATTTTTCTGTTTCTGGATTGAAGGGGGTTATGATGAAGATGGGAGGGGTTTGAGTAATTGGGATGTCTTTT
CTCATATTCCAGGTCCAACCCATCTCCTAATTTCTCATTCCCATTCAAACCCACTTCCCCATTCTCCCTATAATTTTTCTAATTTTTTTCCAAATTTCCAGGAAAAATCA
AGAACAACGACACCGGAGATGTGGCCGACGATCACTACCACCGGTTTCTGGTACTTGTTTAATTTATGGCCGGATGTACCGGAGTCATTTTAA
Protein sequenceShow/hide protein sequence
MVLRIQSWVRSPWPPKSTHFPSLFSSSFCFPLIRVLPFPSSSSSSSSSSLFFCFWIEGGYDEDGRGLSNWDVFSHIPGPTHLLISHSHSNPLPHSPYNFSNFFPNFQEKS
RTTTPEMWPTITTTGFWYLFNLWPDVPESF