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CaUC11G201480 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G201480
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr11:1043510..1044067
RNA-Seq ExpressionCaUC11G201480
SyntenyCaUC11G201480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE7457951.1 unnamed protein product [Symbiodinium pilosum]4.0e-0563.27Show/hide
Query:  CGGYSCCGGSSGCPSCYTCSPCQ-WQECQGCQGCQECQECQGCQSCGCQ
        CGG +CCGG +GC  CY C  CQ  Q CQGC GCQ C  CQGCQ CG Q
Subjt:  CGGYSCCGGSSGCPSCYTCSPCQ-WQECQGCQGCQECQECQGCQSCGCQ

KAG6591970.1 hypothetical protein SDJN03_14316, partial [Cucurbita argyrosperma subsp. sororia]8.3e-4355.96Show/hide
Query:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDC---C------------NYGNIC
        MAVTK SFLVGLLAFLCLSL SA+RVLKNN +E +L++++VSS QDN LQ+ ++AELKSIP+GN+PK SSVG   GDC   C            NYG+  
Subjt:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDC---C------------NYGNIC

Query:  G----GYSCCGGSSGCPSCYTCSPCQWQECQGCQGCQECQ-ECQGCQ-SC-GCQV----------RMNNSKVKQESI-QASEPEPPIVTIVPPVQPADHN
        G     Y   GGSSGC  CYT SPC WQ C G QGCQ CQ  CQGCQ  C GCQ            +N+SK++ ESI    EPEPP++       P +H+
Subjt:  G----GYSCCGGSSGCPSCYTCSPCQWQECQGCQGCQECQ-ECQGCQ-SC-GCQV----------RMNNSKVKQESI-QASEPEPPIVTIVPPVQPADHN

Query:  IKSSGEANQDMKSNGGLV
        IKSSG ANQDMKSNGGLV
Subjt:  IKSSGEANQDMKSNGGLV

KAG6607873.1 hypothetical protein SDJN03_01215, partial [Cucurbita argyrosperma subsp. sororia]7.3e-3152.88Show/hide
Query:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSI-PKGNIPKFSSVGPTNGDCCNYGNICGGYSC-----CGGS
        MAVTK S LV LL  LCLS  SA+RVLK+N SEN+ I++SVS GQ+  L N  HAEL +I P+G+IPKF S      DCCN+GN  GGY C     CG +
Subjt:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSI-PKGNIPKFSSVGPTNGDCCNYGNICGGYSC-----CGGS

Query:  SGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKSSGEANQDMKSNGGLV
        SGC   Y+CSPCQW                    CGC V  + S V QESIQ SE +  +   VP V+PA+HNIK SG ANQ+MKSNGGLV
Subjt:  SGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKSSGEANQDMKSNGGLV

KGN55137.1 hypothetical protein Csa_012773 [Cucumis sativus]8.6e-5659.07Show/hide
Query:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDCCNYGNIC---------------
        MAVT+ S LVGLLAFLCLSLGSA+R+LKNN +ENQLI D V SG++NH QNS+H ELKSIP  ++ K SS+ P NGDCC+YG  C               
Subjt:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDCCNYGNIC---------------

Query:  ---------GGYSCC------GGSSGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKS
                 GG S C      GGSS C SC TCS CQW   QGC GCQECQ CQGCQSCGCQ  M++SKV+Q+S+Q  EP  P+VTIVPP +P D++IKS
Subjt:  ---------GGYSCC------GGSSGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKS

Query:  SGEANQDMKSNGGLV
        SG +NQD+KSNGGLV
Subjt:  SGEANQDMKSNGGLV

XP_023535133.1 mesenchyme-specific cell surface glycoprotein-like [Cucurbita pepo subsp. pepo]3.7e-4355.56Show/hide
Query:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDC---C------------NYGNIC
        MAVTK SFLVGLLAFLCLSL SA+RVLKNN +E +L+S++VSS QDN LQ+ ++AELKSIP+GN+PK SSVG   GDC   C            NYG+  
Subjt:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDC---C------------NYGNIC

Query:  G----GYSCCGGSSGCPSCYTCSPCQWQEC---QGCQGCQ-ECQECQ-GCQSC-----GCQV----------RMNNSKVKQESI-QASEPEPPIVTIVPP
        G     Y   GGSSGC  CYT SPC WQ C   QGCQGCQ  CQ CQ GCQ C     GCQ            +N+SK++ ESI    EPEPP++     
Subjt:  G----GYSCCGGSSGCPSCYTCSPCQWQEC---QGCQGCQ-ECQECQ-GCQSC-----GCQV----------RMNNSKVKQESI-QASEPEPPIVTIVPP

Query:  VQPADHNIKSSGEANQDMKSNGGLV
          P +H+IKSSG ANQDMKSNGGLV
Subjt:  VQPADHNIKSSGEANQDMKSNGGLV

TrEMBL top hitse value%identityAlignment
A0A0A0L3F6 Uncharacterized protein4.1e-5659.07Show/hide
Query:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDCCNYGNIC---------------
        MAVT+ S LVGLLAFLCLSLGSA+R+LKNN +ENQLI D V SG++NH QNS+H ELKSIP  ++ K SS+ P NGDCC+YG  C               
Subjt:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDCCNYGNIC---------------

Query:  ---------GGYSCC------GGSSGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKS
                 GG S C      GGSS C SC TCS CQW   QGC GCQECQ CQGCQSCGCQ  M++SKV+Q+S+Q  EP  P+VTIVPP +P D++IKS
Subjt:  ---------GGYSCC------GGSSGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKS

Query:  SGEANQDMKSNGGLV
        SG +NQD+KSNGGLV
Subjt:  SGEANQDMKSNGGLV

A0A5A7V9R7 Uncharacterized protein4.4e-0578.95Show/hide
Query:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLIS
        MAVTK S LVGLLAFLCLSL SA+R+LKNN +ENQLI+
Subjt:  MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTACAAAAATTAGTTTTCTGGTTGGTCTCTTGGCATTTCTCTGCTTAAGCCTCGGCTCTGCCCATCGAGTTCTCAAGAACAACCATTCTGAAAACCAATTAAT
AAGTGACAGTGTGTCTTCTGGACAAGATAATCACCTACAAAATTCCAGCCATGCTGAGTTGAAAAGTATACCAAAAGGCAACATACCAAAATTCAGTTCTGTTGGTCCAA
CAAATGGTGATTGTTGCAACTATGGCAACATCTGTGGAGGATATTCATGTTGTGGTGGAAGCTCTGGTTGCCCGTCATGCTACACTTGTTCGCCATGTCAATGGCAGGAA
TGCCAGGGATGCCAGGGATGTCAAGAGTGTCAGGAGTGTCAAGGATGCCAGAGTTGTGGCTGTCAAGTCCGCATGAACAACTCTAAGGTCAAACAGGAATCTATTCAAGC
AAGTGAACCTGAACCGCCTATTGTTACAATTGTTCCACCAGTCCAGCCAGCAGATCATAACATAAAATCTAGTGGGGAAGCAAATCAGGACATGAAATCCAATGGCGGTC
TGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTACAAAAATTAGTTTTCTGGTTGGTCTCTTGGCATTTCTCTGCTTAAGCCTCGGCTCTGCCCATCGAGTTCTCAAGAACAACCATTCTGAAAACCAATTAAT
AAGTGACAGTGTGTCTTCTGGACAAGATAATCACCTACAAAATTCCAGCCATGCTGAGTTGAAAAGTATACCAAAAGGCAACATACCAAAATTCAGTTCTGTTGGTCCAA
CAAATGGTGATTGTTGCAACTATGGCAACATCTGTGGAGGATATTCATGTTGTGGTGGAAGCTCTGGTTGCCCGTCATGCTACACTTGTTCGCCATGTCAATGGCAGGAA
TGCCAGGGATGCCAGGGATGTCAAGAGTGTCAGGAGTGTCAAGGATGCCAGAGTTGTGGCTGTCAAGTCCGCATGAACAACTCTAAGGTCAAACAGGAATCTATTCAAGC
AAGTGAACCTGAACCGCCTATTGTTACAATTGTTCCACCAGTCCAGCCAGCAGATCATAACATAAAATCTAGTGGGGAAGCAAATCAGGACATGAAATCCAATGGCGGTC
TGGTTTAG
Protein sequenceShow/hide protein sequence
MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDCCNYGNICGGYSCCGGSSGCPSCYTCSPCQWQE
CQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKSSGEANQDMKSNGGLV