; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G201650 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G201650
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionHistidine-rich glycoprotein-like isoform X2
Genome locationCiama_Chr11:1224387..1224944
RNA-Seq ExpressionCaUC11G201650
SyntenyCaUC11G201650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064320.1 histidine-rich glycoprotein-like isoform X2 [Cucumis melo var. makuwa]1.2e-1765.12Show/hide
Query:  IVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHH----HHHDHN-HVDKHH
        ++VAT+SIV+V LPMGAEA IP VGPIAQCIQGCT+SLS+LTPGYC +ICGAEY PLT   ++T   HH    HHH+H+ H + HH
Subjt:  IVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHH----HHHDHN-HVDKHH

KAE8649837.1 hypothetical protein Csa_012364 [Cucumis sativus]5.4e-1853.91Show/hide
Query:  IVNSAKVPTTSRKVMIVSMTTIVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETS---------APHH-
        ++N  K+  TSR V IV + T+++ATVSIV+VL PMGA+A IP VGPIAQCIQGCTKSLS+LTPGYC ++CGAEY PL    + T+           HH 
Subjt:  IVNSAKVPTTSRKVMIVSMTTIVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETS---------APHH-

Query:  ---HHHDHNHVDKHH
           HHH+H+   +HH
Subjt:  ---HHHDHNHVDKHH

KAG6591952.1 hypothetical protein SDJN03_14298, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1149.54Show/hide
Query:  VNSAKVPTTSRKVMIVSMTTIVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHHHHHDHNH----
        +NS K  +T R+V+IV   T++VA   I+V LLPM AEA +P  G ++QCIQGCTKSL+ LT GYC ++C AE+ PL+        PHHH HDH+H    
Subjt:  VNSAKVPTTSRKVMIVSMTTIVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHHHHHDHNH----

Query:  VDKHHIIAD
        VD H  + D
Subjt:  VDKHHIIAD

KAG6607883.1 hypothetical protein SDJN03_01225, partial [Cucurbita argyrosperma subsp. sororia]9.6e-0744.32Show/hide
Query:  SMTTIVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHHHHHDHNHVDKHHIIA
        +M  I+ A  ++ +VLLPM AEA IPTVG I +CI+ C  SL SL P YCS +C AE+ P   +H+     H H H H     H  +A
Subjt:  SMTTIVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHHHHHDHNHVDKHHIIA

TrEMBL top hitse value%identityAlignment
A0A5A7VAR8 Histidine-rich glycoprotein-like isoform X25.9e-1865.12Show/hide
Query:  IVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHH----HHHDHN-HVDKHH
        ++VAT+SIV+V LPMGAEA IP VGPIAQCIQGCT+SLS+LTPGYC +ICGAEY PLT   ++T   HH    HHH+H+ H + HH
Subjt:  IVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHH----HHHDHN-HVDKHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCTACACCACACAACTTTTCCCTTCATCTTTTGGCCAAACACCTTGAAATAGCCAATCCCTCCTCTCCCTTAACCTTTAAAACACAACAAACCCTTCTCCCCAT
TCTCACCAACCCCTTGTGTAAATTTCAATTTCCCATTGGCAAACCAACACACATCACACACGGAGCCCAAAAAACGGAGAAAAAAGAGGCAACGACGACGACCATGACGA
CGATCGTGAACTCAGCTAAAGTACCAACAACATCGAGAAAGGTCATGATCGTCTCCATGACGACGATCGTCGTTGCTACCGTTAGCATTGTCGTGGTCTTGCTTCCAATG
GGTGCAGAAGCGCTTATCCCAACCGTTGGTCCAATCGCTCAATGTATCCAAGGGTGCACAAAGTCGCTGTCAAGTTTAACTCCTGGTTATTGCTCGAGTATTTGTGGAGC
TGAGTATAGGCCTCTAACAACAAGACATAGAGAGACTTCTGCCCCTCATCATCATCATCATGATCATAACCATGTTGATAAGCATCATATTATTGCTGATGTTATCATAC
CAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCTACACCACACAACTTTTCCCTTCATCTTTTGGCCAAACACCTTGAAATAGCCAATCCCTCCTCTCCCTTAACCTTTAAAACACAACAAACCCTTCTCCCCAT
TCTCACCAACCCCTTGTGTAAATTTCAATTTCCCATTGGCAAACCAACACACATCACACACGGAGCCCAAAAAACGGAGAAAAAAGAGGCAACGACGACGACCATGACGA
CGATCGTGAACTCAGCTAAAGTACCAACAACATCGAGAAAGGTCATGATCGTCTCCATGACGACGATCGTCGTTGCTACCGTTAGCATTGTCGTGGTCTTGCTTCCAATG
GGTGCAGAAGCGCTTATCCCAACCGTTGGTCCAATCGCTCAATGTATCCAAGGGTGCACAAAGTCGCTGTCAAGTTTAACTCCTGGTTATTGCTCGAGTATTTGTGGAGC
TGAGTATAGGCCTCTAACAACAAGACATAGAGAGACTTCTGCCCCTCATCATCATCATCATGATCATAACCATGTTGATAAGCATCATATTATTGCTGATGTTATCATAC
CAAGTTAG
Protein sequenceShow/hide protein sequence
MLSTPHNFSLHLLAKHLEIANPSSPLTFKTQQTLLPILTNPLCKFQFPIGKPTHITHGAQKTEKKEATTTTMTTIVNSAKVPTTSRKVMIVSMTTIVVATVSIVVVLLPM
GAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHHHHHDHNHVDKHHIIADVIIPS