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CaUC11G201930 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G201930
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionGlutamate receptor
Genome locationCiama_Chr11:1498826..1499789
RNA-Seq ExpressionCaUC11G201930
SyntenyCaUC11G201930
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
GO:0038023 - signaling receptor activity (molecular function)
InterPro domainsIPR028082 - Periplasmic binding protein-like I


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33805.1 glutamate-gated kainate-type ion channel receptor subunit glur5 [Cucumis melo subsp. melo]1.4e-4267.79Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAMHMAIEDFNSL+NQNFSL+I+D+R+DPN   LAAK+LISVQ+V ALIGPQTWEMASVVAE                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGI+SS DWHLVNVIYED DFSTTG+F  LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

TYK27933.1 glutamate receptor 2.8-like isoform X2 [Cucumis melo var. makuwa]1.4e-4267.79Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAMHMAIEDFNSL+NQNFSL+I+D+R+DPN   LAAK+LISVQ+V ALIGPQTWEMASVVAE                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGI+SS DWHLVNVIYED DFSTTG+F  LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

XP_008463716.1 PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo]1.4e-4267.79Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAMHMAIEDFNSL+NQNFSL+I+D+R+DPN   LAAK+LISVQ+V ALIGPQTWEMASVVAE                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGI+SS DWHLVNVIYED DFSTTG+F  LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

XP_022976413.1 glutamate receptor 2.8-like [Cucurbita maxima]1.1e-4267.11Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAM MAIEDFNSL+N+NFSL+I+DSRSDPN   LAAK+LIS+Q+V  LIGPQTWE+ASVV+E                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGII SWDWHLVNVIYEDRDFSTT IFP LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

XP_038898557.1 glutamate receptor 2.8-like [Benincasa hispida]2.8e-4671.81Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAMHMAIE+FNSL+NQNFSLII+DSRSDPN   LAAK+LISVQQVHALIG QTWEMASVVAE                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ I GIISSWDWHLVNVIYEDRDFSTTG+FP LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

TrEMBL top hitse value%identityAlignment
A0A1S3CLG9 Glutamate receptor6.9e-4367.79Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAMHMAIEDFNSL+NQNFSL+I+D+R+DPN   LAAK+LISVQ+V ALIGPQTWEMASVVAE                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGI+SS DWHLVNVIYED DFSTTG+F  LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

A0A5A7VK72 Glutamate receptor6.9e-4367.79Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAMHMAIEDFNSL+NQNFSL+I+D+R+DPN   LAAK+LISVQ+V ALIGPQTWEMASVVAE                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGI+SS DWHLVNVIYED DFSTTG+F  LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

A0A5D3DW80 Glutamate receptor6.9e-4367.79Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAMHMAIEDFNSL+NQNFSL+I+D+R+DPN   LAAK+LISVQ+V ALIGPQTWEMASVVAE                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGI+SS DWHLVNVIYED DFSTTG+F  LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

A0A6J1IM27 Glutamate receptor5.3e-4367.11Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAM MAIEDFNSL+N+NFSL+I+DSRSDPN   LAAK+LIS+Q+V  LIGPQTWE+ASVV+E                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGII SWDWHLVNVIYEDRDFSTT IFP LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

E5GBG3 Glutamate receptor6.9e-4367.79Show/hide
Query:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP
        IGKEEILAMHMAIEDFNSL+NQNFSL+I+D+R+DPN   LAAK+LISVQ+V ALIGPQTWEMASVVAE                             ASP
Subjt:  IGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPN---LAAKELISVQQVHALIGPQTWEMASVVAE-----------------------------ASP

Query:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE
        SQLNQM+ IAGI+SS DWHLVNVIYED DFSTTG+F  LVHALKDVGAE
Subjt:  SQLNQMKTIAGIISSWDWHLVNVIYEDRDFSTTGIFPDLVHALKDVGAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTGGAAAGCATGAAACCGAAAGAAATGATTGGTAAGGAAGAGATTTTAGCTATGCACATGGCTATAGAGGATTTTAACTCCTTGAACAATCAAAATTTCAGTCT
TATCATTAAAGATTCCAGAAGTGATCCCAATCTTGCAGCTAAAGAGCTCATCAGTGTACAACAAGTTCATGCTTTAATAGGGCCACAAACTTGGGAAATGGCATCCGTAG
TTGCTGAGGCTTCTCCTTCCCAGTTAAATCAAATGAAGACTATAGCTGGTATTATCAGTTCATGGGATTGGCATCTAGTCAATGTTATATATGAAGATAGAGATTTCTCA
ACCACAGGAATATTTCCTGATCTTGTACATGCCCTCAAAGATGTAGGAGCTGAAAATTTTTGTAGTGCATATGTCTTTCAAGTTGGCACTGCATCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTGGAAAGCATGAAACCGAAAGAAATGATTGGTAAGGAAGAGATTTTAGCTATGCACATGGCTATAGAGGATTTTAACTCCTTGAACAATCAAAATTTCAGTCT
TATCATTAAAGATTCCAGAAGTGATCCCAATCTTGCAGCTAAAGAGCTCATCAGTGTACAACAAGTTCATGCTTTAATAGGGCCACAAACTTGGGAAATGGCATCCGTAG
TTGCTGAGGCTTCTCCTTCCCAGTTAAATCAAATGAAGACTATAGCTGGTATTATCAGTTCATGGGATTGGCATCTAGTCAATGTTATATATGAAGATAGAGATTTCTCA
ACCACAGGAATATTTCCTGATCTTGTACATGCCCTCAAAGATGTAGGAGCTGAAAATTTTTGTAGTGCATATGTCTTTCAAGTTGGCACTGCATCTATTTGA
Protein sequenceShow/hide protein sequence
MFLESMKPKEMIGKEEILAMHMAIEDFNSLNNQNFSLIIKDSRSDPNLAAKELISVQQVHALIGPQTWEMASVVAEASPSQLNQMKTIAGIISSWDWHLVNVIYEDRDFS
TTGIFPDLVHALKDVGAENFCSAYVFQVGTASI