; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G202360 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G202360
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description50S ribosomal protein L13
Genome locationCiama_Chr11:1933446..1937905
RNA-Seq ExpressionCaUC11G202360
SyntenyCaUC11G202360
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0017148 - negative regulation of translation (biological process)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001280 - Photosystem I PsaA/PsaB
IPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR036408 - Photosystem I PsaA/PsaB superfamily
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.0e-11570.06Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSL STL N + SNR+IPR SL+AGFPLP SKSSFL TQTTI+L S PKSS  QVRAQELDRVPLEQRWMF+GDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPV+LPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

XP_004146016.1 50S ribosomal protein L13, chloroplastic [Cucumis sativus]3.3e-11972.22Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSL STLTNG+TSN+S PR SLL  FPLPHSKSSFLLTQT+ISL SN K SALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPV+LPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

XP_008463780.1 PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo]9.7e-11972.53Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSL S+LTNG+TSNRSIP  SLL  FPLPHSKSSFLLTQTTI L SN K SAL+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPVELPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]1.7e-11570.37Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSL STL N + SNR+IPR SL+AGFPLP SKSSFL TQTTI+L S PKSS  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPV+LPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]2.2e-11570.37Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSL STL NG+ SNR++PR SL+AGFPL  SKSSFL TQTTI+L S PKSS LQVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPV+LPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein1.6e-11972.22Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSL STLTNG+TSN+S PR SLL  FPLPHSKSSFLLTQT+ISL SN K SALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPV+LPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

A0A1S3CK07 50S ribosomal protein L13, chloroplastic4.7e-11972.53Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSL S+LTNG+TSNRSIP  SLL  FPLPHSKSSFLLTQTTI L SN K SAL+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPVELPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like1.6e-11470.06Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF + STL NGS SNR IPRKS + GFPLP SKS  L TQTTI+LNS  KSS +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPVELPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like8.3e-11670.37Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSL STL N + SNR+IPR SL+AGFPLP SKSSFL TQTTI+L S PKSS  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPV+LPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like1.2e-11469.75Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSL ST  N + SNR+IPRKSL+AGFPLP SKSSFL TQTTI+L S PKSS  QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG
        AVRGMLPKGR                                                                            LGRALFNHLKVYKG
Subjt:  AVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKG

Query:  PDHPHEAQKPVELPIRDKRINKER
        PDHPHEAQKPV+LPIRDKRINKER
Subjt:  PDHPHEAQKPVELPIRDKRINKER

SwissProt top hitse value%identityAlignment
B1WQT8 50S ribosomal protein L138.7e-3843Show/hide
Query:  EKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPK
        ++ WYV+DATD+ LGRLA  +A  +RGK+  TYTP +D G FVI++NA+KVAV+G+K TQKLYRRHSGRPGGM +ETF++LQQRIPERIIE AV+GMLPK
Subjt:  EKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPK

Query:  GRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKGPDHPHEAQ
                                                                                      LGR LF  LKVY GP+HPH+AQ
Subjt:  GRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKGPDHPHEAQ

Query:  KPVELPI
        KP EL +
Subjt:  KPVELPI

B8HMT1 50S ribosomal protein L132.7e-3944.14Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK    YTPS+D G FVIVVNAEKVAV+GKKRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNH
        ERIIEHAV+GMLPK                                                                              LGR LF  
Subjt:  ERIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNH

Query:  LKVYKGPDHPHEAQKPVELPIR
        LKVY GPDHPH+AQKP  L ++
Subjt:  LKVYKGPDHPHEAQKPVELPIR

P12629 50S ribosomal protein L13, chloroplastic7.8e-7149.55Show/hide
Query:  LATMAMLCASSST-PTFSLQSTL--TN-GSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDI
        +ATMA  CASS T P+   Q +   TN   T   S PR ++ A   +   KS+   T+ T       ++   +     +  VPL+QRWMF  +E  GPDI
Subjt:  LATMAMLCASSST-PTFSLQSTL--TN-GSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDI

Query:  WNKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRI
        WN TWYPK+ADHV T+K WYVVDATD ILGR+ASTIA HIRGK+LA+YTPSVDMGAFVIVVNA+KVAVSGKKRTQKLYRRHSGRPGG+  ETFDQLQ+RI
Subjt:  WNKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRI

Query:  PERIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFN
        PERIIEHAVRGMLPKGR                                                                            LGR LFN
Subjt:  PERIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFN

Query:  HLKVYKGPDHPHEAQKPVELPIRDKRINKER
        HLKVYKG +HPH+AQ+P++LP+RDKRI  E+
Subjt:  HLKVYKGPDHPHEAQKPVELPIRDKRINKER

Q3MF94 50S ribosomal protein L133.9e-3871.05Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+ A YTP +D G FVIVVNAEKVAV+GKKRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPK
        ERI+EHAV+GMLPK
Subjt:  ERIIEHAVRGMLPK

Q3MF94 50S ribosomal protein L131.1e-0368.97Show/hide
Query:  LGRALFNHLKVYKGPDHPHEAQKPVELPI
        LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  LGRALFNHLKVYKGPDHPHEAQKPVELPI

Q9SYL9 50S ribosomal protein L13, chloroplastic2.4e-8053.5Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC SSST   S  S  ++GS       RKS   GF L    ++       + + +N K   LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+LA+YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHL
        RI+EHAVRGMLPKGR                                                                            LGRALFNHL
Subjt:  RIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHL

Query:  KVYKGPDHPHEAQKPVELPIRDKRINKER
        KVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  KVYKGPDHPHEAQKPVELPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein1.7e-8153.5Show/hide
Query:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC SSST   S  S  ++GS       RKS   GF L    ++       + + +N K   LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+LA+YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHL
        RI+EHAVRGMLPKGR                                                                            LGRALFNHL
Subjt:  RIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHL

Query:  KVYKGPDHPHEAQKPVELPIRDKRINKER
        KVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  KVYKGPDHPHEAQKPVELPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein6.9e-1437.14Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRV
        W V DA  ++LGRLAS I+  ++ KD  TY P+ D G   IV+NA+++  +G+K T K YR H+G  G +   +      + P  +I  AV  MLP   +
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRV

Query:  NGVED
            D
Subjt:  NGVED

AT3G01790.2 Ribosomal protein L13 family protein6.9e-1437.14Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRV
        W V DA  ++LGRLAS I+  ++ KD  TY P+ D G   IV+NA+++  +G+K T K YR H+G  G +   +      + P  +I  AV  MLP   +
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRV

Query:  NGVED
            D
Subjt:  NGVED

ATCG00350.1 Photosystem I, PsaA/PsaB protein1.4e-1954.26Show/hide
Query:  ERIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQL---FAEGAIPFFTLNWSKYAEFLTFCGELDQVT
        E ++ H + G+L  G ++       +S       F     DPKE+PLPHEFIL RDLLAQL   FAEGA PFFTLNWSKY+EFLTF G LD VT
Subjt:  ERIIEHAVRGMLPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQL---FAEGAIPFFTLNWSKYAEFLTFCGELDQVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTAGCTACAATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACAATCCACTCTTACCAATGGAAGCACAAGTAACAGAAGCATTCCC
AGAAAGTCACTCCTTGCTGGGTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCACGATTTCTCTAAACTCCAACCCCAAAAGTTCGGCCCTT
CAAGTGCGAGCTCAGGAGCTGGATCGCGTCCCTTTGGAACAGCGGTGGATGTTCGAAGGCGACGAGCTCGACGGCCCTGACATTTGGAATAAAACATGGTACCCG
AAGGCTGCAGATCATGTGAACACAGAAAAACCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGGCTAGCTTCGACCATTGCCAACCATATCCGAGGG
AAGGATTTGGCAACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGCAAAAAGAGGACACAAAAACTA
TACAGGAGGCATTCAGGGCGACCAGGTGGTATGACGGTAGAAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGCATG
CTTCCGAAAGGGAGGGTTAATGGTGTGGAGGATGTGGCAAGAATGAGTTGCTTGGGAAAGTTTGAAGTGTTTGAGAAACTAACATATGATCCTAAAGAGGTTCCA
CTTCCTCATGAATTTATCTTGACTCGGGATCTTTTGGCGCAACTTTTTGCTGAGGGTGCAATCCCATTTTTCACTTTGAATTGGTCAAAATATGCAGAATTTCTT
ACTTTTTGCGGAGAACTAGATCAAGTAACCCAGCTTGGAAGAGCACTTTTTAACCACTTGAAGGTTTACAAAGGACCAGATCATCCACACGAGGCACAAAAGCCA
GTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATTAGCTACAATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACAATCCACTCTTACCAATGGAAGCACAAGTAACAGAAGCATTCCC
AGAAAGTCACTCCTTGCTGGGTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCACGATTTCTCTAAACTCCAACCCCAAAAGTTCGGCCCTT
CAAGTGCGAGCTCAGGAGCTGGATCGCGTCCCTTTGGAACAGCGGTGGATGTTCGAAGGCGACGAGCTCGACGGCCCTGACATTTGGAATAAAACATGGTACCCG
AAGGCTGCAGATCATGTGAACACAGAAAAACCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGGCTAGCTTCGACCATTGCCAACCATATCCGAGGG
AAGGATTTGGCAACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGCAAAAAGAGGACACAAAAACTA
TACAGGAGGCATTCAGGGCGACCAGGTGGTATGACGGTAGAAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGCATG
CTTCCGAAAGGGAGGGTTAATGGTGTGGAGGATGTGGCAAGAATGAGTTGCTTGGGAAAGTTTGAAGTGTTTGAGAAACTAACATATGATCCTAAAGAGGTTCCA
CTTCCTCATGAATTTATCTTGACTCGGGATCTTTTGGCGCAACTTTTTGCTGAGGGTGCAATCCCATTTTTCACTTTGAATTGGTCAAAATATGCAGAATTTCTT
ACTTTTTGCGGAGAACTAGATCAAGTAACCCAGCTTGGAAGAGCACTTTTTAACCACTTGAAGGTTTACAAAGGACCAGATCATCCACACGAGGCACAAAAGCCA
GTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAGTATGAACTACTAAGAGCAAACAAACGACGAAGAGACAAAGCTCTCTTGTCTGAGGTTTCC
AATGTTCATAGAATCGAGTTAGAGTTTTCATGCTTCAACTCAAATTGATCAGTATTTGATCTGTAATTTGATTCCAAATTCTAGTCTCCTCTCATAACATCTTAG
CCCTATGTTGCGTTTTCAAAGTTATTAATTCAAAAGAGGAATTCTAATATTGCCCTGTTGGAGGTTGTGATAATGGTATTTTGATTACATTTGTTGATTGATTTC
CCTAAAAGGCATATTAGTATCACAATCTATGAAATTGGTAACCTTTTGGATTCTAGCTTTATATGGATTGAGCTGAATTTGTACAACAAT
Protein sequenceShow/hide protein sequence
MRLATMAMLCASSSTPTFSLQSTLTNGSTSNRSIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGM
LPKGRVNGVEDVARMSCLGKFEVFEKLTYDPKEVPLPHEFILTRDLLAQLFAEGAIPFFTLNWSKYAEFLTFCGELDQVTQLGRALFNHLKVYKGPDHPHEAQKP
VELPIRDKRINKER