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CaUC11G202860 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G202860
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionGamma-aminobutyrate transaminase POP2
Genome locationCiama_Chr11:2305330..2313056
RNA-Seq ExpressionCaUC11G202860
SyntenyCaUC11G202860
Gene Ontology termsGO:0008483 - transaminase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF1931303.1 unnamed protein product [Brassica napus]8.1e-0651.47Show/hide
Query:  IRAVLKRYEILFIADGARDDV---------------RPLSSAYMPISVVLLSPEVSNVIQSQSNKLGI
        I+AV+K+Y+ILFIAD ARD+V               + LSSAY+PI  +L+S EV++VI SQSNKLG+
Subjt:  IRAVLKRYEILFIADGARDDV---------------RPLSSAYMPISVVLLSPEVSNVIQSQSNKLGI

KAG2271007.1 hypothetical protein Bca52824_065562 [Brassica carinata]1.6e-0653.62Show/hide
Query:  IRAVLKRYEILFIADGARDDV---------------RPLSSAYMPISVVLLSPEVSNVIQSQSNKLGIL
        I+AV+K+Y+ILFIAD ARD+V               + LSSAY+PI  +L+S EV++VI SQSNKLGIL
Subjt:  IRAVLKRYEILFIADGARDDV---------------RPLSSAYMPISVVLLSPEVSNVIQSQSNKLGIL

KAG5123795.1 hypothetical protein JHK82_030532 [Glycine max]1.1e-0562.26Show/hide
Query:  IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLGI
        ++AV+K+Y+ILFIAD A      LSSAY+PI  VL+SPE+S VI  QSNKLGI
Subjt:  IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLGI

KAG6577092.1 putative protein S-acyltransferase 19, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0662.9Show/hide
Query:  ILESHSNFD-IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLG
        IL   + FD I+AVLK+Y+ILFIAD A      LSSAYMPI  VL+SPE+S+VI SQS+KLG
Subjt:  ILESHSNFD-IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLG

XP_022931320.1 gamma aminobutyrate transaminase 1, mitochondrial-like [Cucurbita moschata]1.4e-0552.7Show/hide
Query:  IRAVLKRYEILFIAD---------GA-----RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG
        I+AVLK+Y+ILF+AD         GA     + D++P        LSSAYMPI  VLLSPE+S+VI SQSNKLG
Subjt:  IRAVLKRYEILFIAD---------GA-----RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG

TrEMBL top hitse value%identityAlignment
A0A1D6PUB1 Putative aminotransferase class III superfamily protein8.7e-0663.46Show/hide
Query:  IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLG
        I+AVLK+Y+IL IAD A      LSSAYMPI  +L+SPE+++VI SQSNKLG
Subjt:  IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLG

A0A1D6PUB2 Putative aminotransferase class III superfamily protein8.7e-0663.46Show/hide
Query:  IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLG
        I+AVLK+Y+IL IAD A      LSSAYMPI  +L+SPE+++VI SQSNKLG
Subjt:  IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLG

A0A1D6PUB3 Putative aminotransferase class III superfamily protein8.7e-0663.46Show/hide
Query:  IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLG
        I+AVLK+Y+IL IAD A      LSSAYMPI  +L+SPE+++VI SQSNKLG
Subjt:  IRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLG

A0A6J1EZ43 gamma aminobutyrate transaminase 1, mitochondrial-like6.7e-0652.7Show/hide
Query:  IRAVLKRYEILFIAD---------GA-----RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG
        I+AVLK+Y+ILF+AD         GA     + D++P        LSSAYMPI  VLLSPE+S+VI SQSNKLG
Subjt:  IRAVLKRYEILFIAD---------GA-----RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG

A0A6J1FIM2 gamma aminobutyrate transaminase 3, chloroplastic-like1.1e-0550Show/hide
Query:  ILESHSNFD-IRAVLKRYEILFIAD---------GA-----RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG
        IL   + FD ++AVLK+Y+ILFIAD         GA     + D++P        LSSAYMPI  V++SPEVS+VI SQSNKLG
Subjt:  ILESHSNFD-IRAVLKRYEILFIAD---------GA-----RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG

SwissProt top hitse value%identityAlignment
B8BBZ7 Probable gamma-aminobutyrate transaminase 3, mitochondrial1.7e-0645.95Show/hide
Query:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG
        I+AVLK+Y+IL IAD                  D++P        LSSAYMPI  +L+SPE+++VI SQSNKLG
Subjt:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG

Q01K11 Gamma-aminobutyrate transaminase 1, mitochondrial6.4e-0640.54Show/hide
Query:  IRAVLKRYEILFIAD------------------GARDDV----RPLSSAYMPISVVLLSPEVSNVIQSQSNKLG
        ++A++K+Y+ILFIAD                    + D+    + LSSAY+PI  +++SPE+S+VI SQSNKLG
Subjt:  IRAVLKRYEILFIAD------------------GARDDV----RPLSSAYMPISVVLLSPEVSNVIQSQSNKLG

Q6ZCF0 Probable gamma-aminobutyrate transaminase 3, mitochondrial1.7e-0645.95Show/hide
Query:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG
        I+AVLK+Y+IL IAD                  D++P        LSSAYMPI  +L+SPE+++VI SQSNKLG
Subjt:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG

Q84P52 Gamma aminobutyrate transaminase 3, chloroplastic7.6e-0745.95Show/hide
Query:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG
        ++A+LK+Y+ILFIAD                + +++P        LSS YMPI  VL+SPEVS+VI SQSNKLG
Subjt:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLG

Q84P54 Gamma aminobutyrate transaminase 1, mitochondrial4.4e-0748.65Show/hide
Query:  IRAVLKRYEILFIAD------------------GARDDV----RPLSSAYMPISVVLLSPEVSNVIQSQSNKLG
        I+AV+K+Y+ILFIAD                    + D+    + LSSAYMPI  VL+SPEVS+VI SQSNKLG
Subjt:  IRAVLKRYEILFIAD------------------GARDDV----RPLSSAYMPISVVLLSPEVSNVIQSQSNKLG

Arabidopsis top hitse value%identityAlignment
AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein3.9e-0640Show/hide
Query:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLGI
        ++AV+K+Y+ILFIAD                + +++P        LSSAYMPI  +L+S EV++VI S S+KLG+
Subjt:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLGI

AT3G22200.2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein3.9e-0640Show/hide
Query:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLGI
        ++AV+K+Y+ILFIAD                + +++P        LSSAYMPI  +L+S EV++VI S S+KLG+
Subjt:  IRAVLKRYEILFIADGA--------------RDDVRP--------LSSAYMPISVVLLSPEVSNVIQSQSNKLGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATGTTGATTTCACGCCCTCTTCATTTGGACTCCATAGCTCAAAGTCTGAATGAAAATAAACGCAGGGACACAAGGCCATCTCAAATTTTAGAATCACAT
TCCAATTTCGATATCCGAGCTGTGCTGAAGAGATATGAAATCCTTTTCATTGCAGATGGGGCTCGGGACGATGTTCGGCCTCTTTCTTCTGCATATATGCCTATT
AGTGTTGTGCTTCTTAGCCCTGAAGTTTCAAATGTCATACAGTCTCAAAGCAATAAGCTTGGTATATTACTTATGGCACAGGCAAAAATATTCTTGAAAGAACAA
ATTGATTGTCTTTTTATTCATTTTTTCCCACGGATTTACATATTCTGGACATCCTATTGCATGTGCTGTGGCAATGGAAACGTTGAAGATCTACAGGCATCATTA
GCCTGTTCCAACAACAACAACAATTACATCTTTGCAAAAGGAGAATCTGAAATATGTCATCATACTGATCGTGGCATATTTTGTTGGGAGCCATGGAAGCAATCA
AGTGCAGCGGCTCTTGCATCCACTTCCTGCACAAATGTACGGTTTGCACCATCTCTAGCACAACTGCATAGAACATACCATCTCCAACGATTTGTACCGTGCCTG
CCTGGTCACCTGAAAGGTAGAAGAACCAGGAGATTATACAGATTTTCACTACAGAATACTAATATTTTTAACCACGTGAAATTATACAATGCTCTCCAACCACAA
ACAGGTACTGACTCACCTTGCCTTTTTTACTCATTTTTCTTTTCCCAGGAGACTTGGCCATATTTTCACCATCATGATCTTCTTCCTCGTCCACAACACCAACAG
ATACCAAGCTACCAGGAAGTCCTGGTGCTCTTCCAGATCATGAATCTGATCGTGGCTATTTGTTTCTCAAAAGGAGAGAGCAACTTTAAGACAGATTCTTGGTGT
CGAGTTTCAAAATCAGCATTAGCTTCCAACTCAAGCATGTCTTTGGAAAATATCTCCAAATGTTTAATGAACTCCTTGAATGAAGTTTCTTTACACATATACTTG
TCAAAAAATGAGGTCACACTCCCAGATCGTTCAATTGTAGACATACCAGCCAAAAAACATCTCCCTCATCTAAAGCCAATTGCAGACCTTTCTTCTCAGAAACAG
CAATATCCGATTTGTCGACGGATAGATAATATAGGTATCGACTATCCTGATGAAGTCTCAAGCTTACACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATGTTGATTTCACGCCCTCTTCATTTGGACTCCATAGCTCAAAGTCTGAATGAAAATAAACGCAGGGACACAAGGCCATCTCAAATTTTAGAATCACAT
TCCAATTTCGATATCCGAGCTGTGCTGAAGAGATATGAAATCCTTTTCATTGCAGATGGGGCTCGGGACGATGTTCGGCCTCTTTCTTCTGCATATATGCCTATT
AGTGTTGTGCTTCTTAGCCCTGAAGTTTCAAATGTCATACAGTCTCAAAGCAATAAGCTTGGTATATTACTTATGGCACAGGCAAAAATATTCTTGAAAGAACAA
ATTGATTGTCTTTTTATTCATTTTTTCCCACGGATTTACATATTCTGGACATCCTATTGCATGTGCTGTGGCAATGGAAACGTTGAAGATCTACAGGCATCATTA
GCCTGTTCCAACAACAACAACAATTACATCTTTGCAAAAGGAGAATCTGAAATATGTCATCATACTGATCGTGGCATATTTTGTTGGGAGCCATGGAAGCAATCA
AGTGCAGCGGCTCTTGCATCCACTTCCTGCACAAATGTACGGTTTGCACCATCTCTAGCACAACTGCATAGAACATACCATCTCCAACGATTTGTACCGTGCCTG
CCTGGTCACCTGAAAGGTAGAAGAACCAGGAGATTATACAGATTTTCACTACAGAATACTAATATTTTTAACCACGTGAAATTATACAATGCTCTCCAACCACAA
ACAGGTACTGACTCACCTTGCCTTTTTTACTCATTTTTCTTTTCCCAGGAGACTTGGCCATATTTTCACCATCATGATCTTCTTCCTCGTCCACAACACCAACAG
ATACCAAGCTACCAGGAAGTCCTGGTGCTCTTCCAGATCATGAATCTGATCGTGGCTATTTGTTTCTCAAAAGGAGAGAGCAACTTTAAGACAGATTCTTGGTGT
CGAGTTTCAAAATCAGCATTAGCTTCCAACTCAAGCATGTCTTTGGAAAATATCTCCAAATGTTTAATGAACTCCTTGAATGAAGTTTCTTTACACATATACTTG
TCAAAAAATGAGGTCACACTCCCAGATCGTTCAATTGTAGACATACCAGCCAAAAAACATCTCCCTCATCTAAAGCCAATTGCAGACCTTTCTTCTCAGAAACAG
CAATATCCGATTTGTCGACGGATAGATAATATAGGTATCGACTATCCTGATGAAGTCTCAAGCTTACACAAGTGA
Protein sequenceShow/hide protein sequence
MLMLISRPLHLDSIAQSLNENKRRDTRPSQILESHSNFDIRAVLKRYEILFIADGARDDVRPLSSAYMPISVVLLSPEVSNVIQSQSNKLGILLMAQAKIFLKEQ
IDCLFIHFFPRIYIFWTSYCMCCGNGNVEDLQASLACSNNNNNYIFAKGESEICHHTDRGIFCWEPWKQSSAAALASTSCTNVRFAPSLAQLHRTYHLQRFVPCL
PGHLKGRRTRRLYRFSLQNTNIFNHVKLYNALQPQTGTDSPCLFYSFFFSQETWPYFHHHDLLPRPQHQQIPSYQEVLVLFQIMNLIVAICFSKGESNFKTDSWC
RVSKSALASNSSMSLENISKCLMNSLNEVSLHIYLSKNEVTLPDRSIVDIPAKKHLPHLKPIADLSSQKQQYPICRRIDNIGIDYPDEVSSLHK