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CaUC11G203300 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G203300
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAuxin-responsive family protein
Genome locationCiama_Chr11:2749787..2750257
RNA-Seq ExpressionCaUC11G203300
SyntenyCaUC11G203300
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5576.25Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEE----EEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALID
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCER +EE    EE +    H++++  E+VSG+NVI+YVGSTRKRY ISSKYL+HPLLNALID
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEE----EEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALID

Query:  KSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KSK  K      ED+DDD  CISVRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  KSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_008444291.1 PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]8.5e-5777.78Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE++ E+ E+ FD         +KVSG NNV+LYVGSTRK+YAI+SKYL HPLLNALIDKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK

Query:  SKKLAND-----DEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        SKKL +D     +E D+ DD+DCI VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  SKKLAND-----DEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]7.0e-5980.5Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE+    +EEDF     +QQ  +KVSG+NVILYVGSTRK+YAI+SKYL+HPLLNALIDKSKS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS

Query:  KKLANDDEEDED---DDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KKL +DD++D+D   DD++CI VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  KKLANDDEEDED---DDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]2.5e-5678.34Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQ-LEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVC+R +EE EE  ++  +++ +  EKVSG+NVI+YVGSTRKRYAISSKYL+HPLLNALIDKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQ-LEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK

Query:  SKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
          K  N     EDDDD+CISVRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  SKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]9.7e-6185.99Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS
        MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVC  K+  EEEDF+   QQ+QQLEKVSGN+VILYVGSTRKRYAISSKYL+HPLLNALIDKSKS
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS

Query:  KK-LANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KK LANDD+E+E    DCISVRCEVVLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Subjt:  KK-LANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

TrEMBL top hitse value%identityAlignment
A0A1S3B9J9 uncharacterized protein LOC1034876594.1e-5777.78Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+WVCE++ E+ E+ FD         +KVSG NNV+LYVGSTRK+YAI+SKYL HPLLNALIDKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSG-NNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK

Query:  SKKLAND-----DEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        SKKL +D     +E D+ DD+DCI VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  SKKLAND-----DEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

A0A3N7FTM7 Uncharacterized protein2.6e-3558.33Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRED+W                H+Q+ +      N+  ++VGSTRKRY ISSKYL+HPL+NALI+KS+ 
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS

Query:  KKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        K            +D+ + V+CEVV FDHLLWMLEN+DPN +FDS LEELA+LY+F
Subjt:  KKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

A0A6J1C0S4 uncharacterized protein LOC1110073989.5e-5476.43Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVW-VCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED+W +C  K+EEEEE+ ++   QQQQLEKV G+NVI+YVGSTRK+Y ISSK+L+HPL+NALIDKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVW-VCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSK

Query:  SKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        SK       + + +D + ISVRCEVVLFDHLLWMLENSDPNITFDSNLEELA+LYVF
Subjt:  SKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

B9RI47 Uncharacterized protein9.0e-3661.54Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE++W   +  EE+EE     HQ              L+VGSTRKRY ISSKYL+HPL+NALI KSK 
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS

Query:  KKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        ++            ++ + V+CEVVLFDHLLWMLEN+DPN++FDS LEELAELYVF
Subjt:  KKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

W9S1R7 Uncharacterized protein4.4e-3555Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS
        MKKINS+LRKCKSLSRQL RSSSYS+LRSKS+R+D WV            D+  QQQ QL++    +  ++VGS +KRY IS+K+L+HPLL ALIDKS+ 
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKS

Query:  KKLANDDEEDED----DDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        K  + D+   +D    ++++ + V+CEVVLFDHLLWMLEN+DP      +LEELA LYVF
Subjt:  KKLANDDEEDED----DDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR765.3e-0941.18Show/hide
Query:  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY
        +YVG TR+ Y +SS  ++HPL   L             +     +D  ISV CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY

Q9C9E1 Auxin-responsive protein SAUR783.3e-1140.22Show/hide
Query:  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        NN+ ++YVG TR+ Y +    ++HPL   L+D+S S+ +  D E         I V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

Q9LQI6 Auxin-responsive protein SAUR771.3e-1040.86Show/hide
Query:  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF
        ++YVG +R+ Y +SS  + HPL   L+D+S S+ +      +E  D + + V CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family8.9e-1240.86Show/hide
Query:  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF
        ++YVG +R+ Y +SS  + HPL   L+D+S S+ +      +E  D + + V CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF

AT1G72430.1 SAUR-like auxin-responsive protein family2.3e-1240.22Show/hide
Query:  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        NN+ ++YVG TR+ Y +    ++HPL   L+D+S S+ +  D E         I V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  NNV-ILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

AT3G12955.1 SAUR-like auxin-responsive protein family1.6e-2144.81Show/hide
Query:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKK
        ++  +LR+CKS+S QLGRS SY+SLRSKS R D        ++  +D D       Q    S    +L VG T+K Y IS K+L HPLLNAL++K +   
Subjt:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKK

Query:  LANDDEEDEDDDDDC-ISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV
             EED+++D  C I+V+CEVVLFDHLLWMLE  D  +    +L++ A LY+
Subjt:  LANDDEEDEDDDDDC-ISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV

AT5G20820.1 SAUR-like auxin-responsive protein family3.7e-1041.18Show/hide
Query:  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY
        +YVG TR+ Y +SS  ++HPL   L             +     +D  ISV CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  LYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEEDEDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAACTGGGGAGATCCTCTTCTTATAGCAGCTTGAGATCAAAATCCACAAGGGAAGATGTTTG
GGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGAAGATTTTGATAATATTCATCAACAGCAGCAGCAACTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGGA
GCACAAGGAAGAGATATGCAATAAGTTCAAAATATTTGACCCATCCTTTGCTAAATGCTCTTATTGACAAATCAAAGTCTAAGAAATTAGCTAATGATGATGAAGAAGAT
GAAGATGATGATGATGATTGCATTTCAGTGAGATGTGAAGTTGTTCTATTTGACCATCTTTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTT
GGAGGAATTGGCTGAGCTTTATGTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGATAAATTCTCTATTGAGGAAATGCAAGAGCCTTTCAAGGCAACTGGGGAGATCCTCTTCTTATAGCAGCTTGAGATCAAAATCCACAAGGGAAGATGTTTG
GGTTTGTGAAAGAAAATTAGAAGAAGAAGAAGAAGATTTTGATAATATTCATCAACAGCAGCAGCAACTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGGA
GCACAAGGAAGAGATATGCAATAAGTTCAAAATATTTGACCCATCCTTTGCTAAATGCTCTTATTGACAAATCAAAGTCTAAGAAATTAGCTAATGATGATGAAGAAGAT
GAAGATGATGATGATGATTGCATTTCAGTGAGATGTGAAGTTGTTCTATTTGACCATCTTTTGTGGATGTTGGAAAATTCTGATCCAAACATTACTTTTGATTCTAATTT
GGAGGAATTGGCTGAGCTTTATGTTTTTTGA
Protein sequenceShow/hide protein sequence
MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDVWVCERKLEEEEEDFDNIHQQQQQLEKVSGNNVILYVGSTRKRYAISSKYLTHPLLNALIDKSKSKKLANDDEED
EDDDDDCISVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF