; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G203980 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G203980
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr11:3447829..3450386
RNA-Seq ExpressionCaUC11G203980
SyntenyCaUC11G203980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608059.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.3e-7686.31Show/hide
Query:  MRQSPDFGDDYAHGTHN-QSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGL
        M QSPDFG DY  GTH+ QSFSS SL+ SSSRRDVYYSCGACGYELNLSS NRNTSTIGSKYGKSIKRGIISFLN+D+SRFTQVDELQCVPHFSK+SWGL
Subjt:  MRQSPDFGDDYAHGTHN-QSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGL

Query:  FRRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        FRRRIKLLCRKCGNHIGNA++SHT STPLVSDGSDSSLP+E+S+C KYEVKIRALQPSSS+EFD +VI
Subjt:  FRRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

XP_008444153.1 PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis melo]1.7e-8291.67Show/hide
Query:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSP FGDDYAHGTH QSFSSASLFPSSSRRDVYYSCGACGYELNLSS+NRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        RRRIKLLCRKCGN+IGNAHS+HT+S+PLVSDGSD SSLPNE+S+CMKYEVKIRALQPSSSNEF+ ++I
Subjt:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

XP_011653802.1 uncharacterized protein At4g08330, chloroplastic [Cucumis sativus]1.7e-8291.67Show/hide
Query:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSP FGDDYAHGTH QSFSSASLFPSSSRRDVYYSCGACGYELNLSS+NRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        RRRIKLLCRKCGN+IGNAHS+HT+S+PLVSDGSD SSLPNE+S+CMKYEVKIRALQPSSSNEF+ ++I
Subjt:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

XP_022981061.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita maxima]5.1e-7685.71Show/hide
Query:  MRQSPDFGDDYAHGTHN-QSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGL
        M QSPDFG DY  GTH+ QSFSS SL+ SSSRRDVYYSCGACGYELNLSS NRNTSTIGSKYGKSIKRGIISFLN+D+SRFTQVDELQCVPHFSK+SWGL
Subjt:  MRQSPDFGDDYAHGTHN-QSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGL

Query:  FRRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        FRRRIKLLCRKCGNHIGNA++SHT STPLVSDGSDSSLP+E+++C KYEVKIRALQPSSS+EFD +VI
Subjt:  FRRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

XP_038896624.1 uncharacterized protein At4g08330, chloroplastic [Benincasa hispida]5.3e-8191.62Show/hide
Query:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSP FGDDY HGTH QS SSASLFPSSSRRDVYYSCGACG+ELNLSSVNRNTSTIGSKY KSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        RRRIKLLCRKCGNHIGNA SS+TSS+PLVSDGSDSSLPNE+S+CMKYEVKIRALQPSSSNEF T V+
Subjt:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

TrEMBL top hitse value%identityAlignment
A0A0A0L375 Uncharacterized protein8.0e-8391.67Show/hide
Query:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSP FGDDYAHGTH QSFSSASLFPSSSRRDVYYSCGACGYELNLSS+NRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        RRRIKLLCRKCGN+IGNAHS+HT+S+PLVSDGSD SSLPNE+S+CMKYEVKIRALQPSSSNEF+ ++I
Subjt:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

A0A1S3B9P1 uncharacterized protein At4g08330, chloroplastic8.0e-8391.67Show/hide
Query:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSP FGDDYAHGTH QSFSSASLFPSSSRRDVYYSCGACGYELNLSS+NRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        RRRIKLLCRKCGN+IGNAHS+HT+S+PLVSDGSD SSLPNE+S+CMKYEVKIRALQPSSSNEF+ ++I
Subjt:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

A0A5D3D741 Uncharacterized protein8.0e-8391.67Show/hide
Query:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSP FGDDYAHGTH QSFSSASLFPSSSRRDVYYSCGACGYELNLSS+NRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
Subjt:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        RRRIKLLCRKCGN+IGNAHS+HT+S+PLVSDGSD SSLPNE+S+CMKYEVKIRALQPSSSNEF+ ++I
Subjt:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSD-SSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

A0A6J1II32 uncharacterized protein At4g08330, chloroplastic-like9.5e-7685.63Show/hide
Query:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF
        MRQSP FGDD+  GTH ++FSS SL PSSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLNIDESRFTQVD+LQCVPHFSK+SWGLF
Subjt:  MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLF

Query:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        +RRIKLLCRKCGNHIGNA++SHTSS+PLVSDGSDSSLPNE+S+CMKYEVKIRALQPSSS+E    VI
Subjt:  RRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

A0A6J1IVF4 uncharacterized protein At4g08330, chloroplastic2.5e-7685.71Show/hide
Query:  MRQSPDFGDDYAHGTHN-QSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGL
        M QSPDFG DY  GTH+ QSFSS SL+ SSSRRDVYYSCGACGYELNLSS NRNTSTIGSKYGKSIKRGIISFLN+D+SRFTQVDELQCVPHFSK+SWGL
Subjt:  MRQSPDFGDDYAHGTHN-QSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGL

Query:  FRRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI
        FRRRIKLLCRKCGNHIGNA++SHT STPLVSDGSDSSLP+E+++C KYEVKIRALQPSSS+EFD +VI
Subjt:  FRRRIKLLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI

SwissProt top hitse value%identityAlignment
Q9STN5 Uncharacterized protein At4g08330, chloroplastic4.1e-4463.89Show/hide
Query:  HNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNHI
        ++ SFSS+S   SSS R V YSCG+CGYELNLSS NR TSTIGSKYGKS+K GIISF NIDE RF+QVDE QC+PHFS+ SWGLFR R KLLCRKC N+I
Subjt:  HNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNHI

Query:  GNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSS
        GNA         LV+  SD + P  I    KY+++IR+LQPSS+
Subjt:  GNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSS

Arabidopsis top hitse value%identityAlignment
AT2G17705.1 unknown protein5.4e-0730.95Show/hide
Query:  YSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHF-SKNSWGLFRRRIKLLCRKCGNHIGNAHSSHTSSTPLVSD-GS
        Y+C  CG +LNL   N N       Y ++  +G +SF  +D  +F    E + +P F + N WG+ R+R K+ C  C + IG  +       PL    G 
Subjt:  YSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHF-SKNSWGLFRRRIKLLCRKCGNHIGNAHSSHTSSTPLVSD-GS

Query:  DSSLPNE-ISKCMKYEVKIRALQPSS
            P++ I +  +Y  K +A+Q SS
Subjt:  DSSLPNE-ISKCMKYEVKIRALQPSS

AT4G08330.1 unknown protein2.9e-4563.89Show/hide
Query:  HNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNHI
        ++ SFSS+S   SSS R V YSCG+CGYELNLSS NR TSTIGSKYGKS+K GIISF NIDE RF+QVDE QC+PHFS+ SWGLFR R KLLCRKC N+I
Subjt:  HNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNHI

Query:  GNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSS
        GNA         LV+  SD + P  I    KY+++IR+LQPSS+
Subjt:  GNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSS

AT4G08330.2 unknown protein.7.3e-3656.94Show/hide
Query:  HNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNHI
        ++ SFSS+S   SSS R V           N SS NR TSTIGSKYGKS+K GIISF NIDE RF+QVDE QC+PHFS+ SWGLFR R KLLCRKC N+I
Subjt:  HNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIKLLCRKCGNHI

Query:  GNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSS
        GNA         LV+  SD + P  I    KY+++IR+LQPSS+
Subjt:  GNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAGTCGCCGGACTTTGGAGACGATTACGCCCATGGAACTCACAACCAGTCCTTTTCGTCGGCTTCGCTCTTCCCATCTTCTTCTCGCAGAGATGTTTAT
TACAGCTGTGGAGCTTGTGGATACGAACTGAATTTGAGCTCTGTTAACCGCAATACATCGACCATTGGCTCTAAATATGGTAAATCAATAAAGCGAGGGATCATA
TCATTTCTAAACATCGACGAAAGCAGATTTACGCAGGTTGATGAACTTCAATGTGTGCCTCATTTCTCAAAGAACTCGTGGGGTCTGTTTCGTCGAAGAATCAAA
CTACTTTGTCGAAAGTGTGGAAACCATATTGGAAATGCTCATAGTAGCCATACTTCCTCCACCCCTCTTGTTTCAGATGGATCAGATTCATCCTTGCCCAATGAA
ATCTCTAAGTGCATGAAATATGAAGTAAAAATTCGTGCTTTACAACCCTCATCTTCCAACGAATTCGATACCGCAGTTATTTAA
mRNA sequenceShow/hide mRNA sequence
CCCCATCGATTTCTTCAAATTCTCATCTTCAAGCTCCGGTTCTTCATCATCATTCTTCTTCCAATTCTCCCTTTCATTACACTTCGTCTCGTTCAAGCTTCAATT
TCTTTTTGTTCTCAGGTCATAGCTTCTGTTCTTGATTCTTGAGCTCGCTTAGATTAAGTCGGAATTTGATCGCCCACTGTCAAAATTGAATCGTTGTTTCTGCCA
ACTGCGATTTCCCATTTACGACATCGGTACCTCCGTCAACCGTTGCAGCCAGCATCGGAGACGGCGTCGAACTCTGAAGCAGAAGAATGAGGCAGTCGCCGGACT
TTGGAGACGATTACGCCCATGGAACTCACAACCAGTCCTTTTCGTCGGCTTCGCTCTTCCCATCTTCTTCTCGCAGAGATGTTTATTACAGCTGTGGAGCTTGTG
GATACGAACTGAATTTGAGCTCTGTTAACCGCAATACATCGACCATTGGCTCTAAATATGGTAAATCAATAAAGCGAGGGATCATATCATTTCTAAACATCGACG
AAAGCAGATTTACGCAGGTTGATGAACTTCAATGTGTGCCTCATTTCTCAAAGAACTCGTGGGGTCTGTTTCGTCGAAGAATCAAACTACTTTGTCGAAAGTGTG
GAAACCATATTGGAAATGCTCATAGTAGCCATACTTCCTCCACCCCTCTTGTTTCAGATGGATCAGATTCATCCTTGCCCAATGAAATCTCTAAGTGCATGAAAT
ATGAAGTAAAAATTCGTGCTTTACAACCCTCATCTTCCAACGAATTCGATACCGCAGTTATTTAAACAAGAACAAGGGGTTTATTGACTGAATGGTTCTTTCGAG
TTAAAAGAATTGCCTAACAGCAGAAAATGCTGGATTCTCGATATGTTTGCTTTGTTTTACTTGTGAATAGAATCGGGTCTCAAATGGAAGGTAAGTGTAATCGAA
AGGATGCATAGTTATTGTTCTTGCAAATTGAAAGTAATGATTTATACGAGTGAATTGTTTCAAAGGT
Protein sequenceShow/hide protein sequence
MRQSPDFGDDYAHGTHNQSFSSASLFPSSSRRDVYYSCGACGYELNLSSVNRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHFSKNSWGLFRRRIK
LLCRKCGNHIGNAHSSHTSSTPLVSDGSDSSLPNEISKCMKYEVKIRALQPSSSNEFDTAVI