; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G206960 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G206960
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionG-patch domain-containing protein
Genome locationCiama_Chr11:6600839..6607346
RNA-Seq ExpressionCaUC11G206960
SyntenyCaUC11G206960
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000467 - G-patch domain
IPR039146 - G patch domain and ankyrin repeat-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573761.1 hypothetical protein SDJN03_27648, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5187.69Show/hide
Query:  TGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSK
        TGGRMDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLGADKVKKKL+ETTD  ASD K NQERPP KKAK +SK
Subjt:  TGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSK

Query:  RMRKMEEEERLFQEKEFERAFFREFWPENV
        +MRKM EEERLF+EKEFERAFFREFWP+NV
Subjt:  RMRKMEEEERLFQEKEFERAFFREFWPENV

XP_004147099.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]3.0e-5491.27Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KETTD   SD+KNNQERPPPKKAKGL+KRMRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EEERLFQEKEFE+AFFREFWPENV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

XP_008445906.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo]8.0e-5592.86Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KET D  ASD+KNNQERPPPKK KGLSKRMRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EEERLFQEKEFERAFFREFWPENV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

XP_016900186.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo]9.4e-5692.25Show/hide
Query:  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKR
        GG MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KET D  ASD+KNNQERPPPKK KGLSKR
Subjt:  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKR

Query:  MRKMEEEERLFQEKEFERAFFREFWPENV
        MRKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  MRKMEEEERLFQEKEFERAFFREFWPENV

XP_038891672.1 protein PXR1 [Benincasa hispida]9.8e-5389.31Show/hide
Query:  STGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLS
        +TGGRMDLE GSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQAS+KNNKRGLGADKVKKKLKETTD  ASD+KNNQ      KAKGLS
Subjt:  STGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLS

Query:  KRMRKMEEEERLFQEKEFERAFFREFWPENV
        KRMRKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  KRMRKMEEEERLFQEKEFERAFFREFWPENV

TrEMBL top hitse value%identityAlignment
A0A0A0KPR8 G-patch domain-containing protein1.5e-5491.27Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KETTD   SD+KNNQERPPPKKAKGL+KRMRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EEERLFQEKEFE+AFFREFWPENV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

A0A1S3BEH2 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X23.9e-5592.86Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KET D  ASD+KNNQERPPPKK KGLSKRMRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EEERLFQEKEFERAFFREFWPENV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

A0A1S4DW19 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X14.6e-5692.25Show/hide
Query:  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKR
        GG MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLGADKVKKK+KET D  ASD+KNNQERPPPKK KGLSKR
Subjt:  GGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKR

Query:  MRKMEEEERLFQEKEFERAFFREFWPENV
        MRKM+EEERLFQEKEFERAFFREFWPENV
Subjt:  MRKMEEEERLFQEKEFERAFFREFWPENV

A0A6J1CAQ8 G patch domain and ankyrin repeat-containing protein 1 homolog4.6e-4883.33Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        M+ ES SGG+VSA AIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQ SVKNNKRGLGADKVKKKLKET D  ASD+KNNQE PP KK K LSK  RK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M+EE+R+FQEKEFERAFFREFWP+NV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

A0A6J1G054 G patch domain and ankyrin repeat-containing protein 1 homolog4.9e-5088.1Show/hide
Query:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK
        MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLGADKVKKKLKETTD  ASD K NQERPP KKAK +SK+MRK
Subjt:  MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRK

Query:  MEEEERLFQEKEFERAFFREFWPENV
        M EEERLF+EKEFERAFFREFWP+NV
Subjt:  MEEEERLFQEKEFERAFFREFWPENV

SwissProt top hitse value%identityAlignment
A0JMV4 RNA-binding protein 5-A1.2e-0552.17Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA

A2A6A1 G patch domain-containing protein 89.3e-0651.11Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG
        I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG

Q6C233 Protein SQS11.4e-0638.3Show/hide
Query:  VLQNQEQGTR---LKTRHARFIQKSFLSSTGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA
        V++N +  T     +T+H +  ++S +     R+    G      A AID SNIG  LL+K GW  G GLG   +G  EP+ A VK +KRG+GA
Subjt:  VLQNQEQGTR---LKTRHARFIQKSFLSSTGGRMDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA

Q6DDU9 RNA-binding protein 5-B1.2e-0552.17Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA

Q9UKJ3 G patch domain-containing protein 89.3e-0651.11Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG
        I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG

Arabidopsis top hitse value%identityAlignment
AT3G52350.1 D111/G-patch domain-containing protein2.0e-2455.37Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADK-VKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEE
        S  S  + AI SSNIGFQLLKKHGW+EGTGLG+ EQG L P+QA  K+NK+GLGA+K  K+K  +  DT   +          KK+K LSK++ KM E E
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADK-VKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEE

Query:  RLFQEKEFERAFFREFWPENV
        +   E EFERAF REFWP+NV
Subjt:  RLFQEKEFERAFFREFWPENV

AT3G54230.1 suppressor of abi3-51.5e-0647.06Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK

AT3G54230.2 suppressor of abi3-51.5e-0647.06Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK

AT5G08535.1 D111/G-patch domain-containing protein3.6e-2960.83Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEER
        SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+NKRG+GA +  K  ++    +A D++ +      K++K LSK+MRKM E E+
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEER

Query:  LFQEKEFERAFFREFWPENV
          QEKEFERAFFREFWP+NV
Subjt:  LFQEKEFERAFFREFWPENV

AT5G08535.2 D111/G-patch domain-containing protein3.6e-2960.83Show/hide
Query:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEER
        SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+NKRG+GA +  K  ++    +A D++ +      K++K LSK+MRKM E E+
Subjt:  SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEER

Query:  LFQEKEFERAFFREFWPENV
          QEKEFERAFFREFWP+NV
Subjt:  LFQEKEFERAFFREFWPENV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTGTGATTAGCCGATTGAAATTGAAATTTCAGTGGAACGAGCCGACGCTGACCAAACAGATCTATCCCACCCTCCGCCCCCCTTTTGTTAATTTCGTT
AATCGAAGTCTTCGAGTTTGCATTTGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAACAAGGTTGAAGACTCGGCACGCTAGGTTTATCCAGAAGTCC
TTTCTCAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAG
AAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGAT
AAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTGTCAAAAAGG
ATGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTGTGATTAGCCGATTGAAATTGAAATTTCAGTGGAACGAGCCGACGCTGACCAAACAGATCTATCCCACCCTCCGCCCCCCTTTTGTTAATTTCGTT
AATCGAAGTCTTCGAGTTTGCATTTGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAACAAGGTTGAAGACTCGGCACGCTAGGTTTATCCAGAAGTCC
TTTCTCAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAG
AAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGAT
AAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTGTCAAAAAGG
ATGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA
Protein sequenceShow/hide protein sequence
MEGVISRLKLKFQWNEPTLTKQIYPTLRPPFVNFVNRSLRVCICTAASVLQNQEQGTRLKTRHARFIQKSFLSSTGGRMDLESGSGGSVSAAAIDSSNIGFQLLK
KHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQERPPPKKAKGLSKRMRKMEEEERLFQEKEFERAFFREFWPENV