CuGenDBv2

Gene ID	CaUC11G207100
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Cytochrome c oxidase subunit
Genome location	Ciama_Chr11:6777271..6780465
RNA-Seq Expression	CaUC11G207100
Synteny	CaUC11G207100
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domains	IPR003213 - Cytochrome c oxidase, subunit VIb IPR036549 - Cytochrome c oxidase, subunit VIb superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022929560.1 cytochrome c oxidase subunit 6b-2 [Cucurbita moschata]

1.5e-38

98.67

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022969669.1 cytochrome c oxidase subunit 6b-2-like [Cucurbita maxima]

3.4e-38

97.33

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWN+QRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022997477.1 cytochrome c oxidase subunit 6b-2 [Cucurbita maxima]

3.4e-38

97.33

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVE+WNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_038889174.1 cytochrome c oxidase subunit 6b-2 isoform X1 [Benincasa hispida]

6.1e-40

97.44

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Query:  VSPQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +SPQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV+KWNEQRENGTFPGPL
Subjt:  VSPQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_038889175.1 cytochrome c oxidase subunit 6b-2 isoform X2 [Benincasa hispida]

3.4e-38

97.33

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV+KWNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BUT2 Cytochrome c oxidase subunit

1.6e-38

97.33

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV+KWNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1DIX3 Cytochrome c oxidase subunit

2.1e-38

97.33

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1EUQ5 Cytochrome c oxidase subunit

7.3e-39

98.67

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1I3B0 Cytochrome c oxidase subunit

1.6e-38

97.33

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWN+QRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1K554 Cytochrome c oxidase subunit

1.6e-38

97.33

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVE+WNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

SwissProt top hits

e value

%identity

Alignment

O94581 Cytochrome c oxidase subunit 12, mitochondrial

3.0e-21

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        Q    T   D RFP TNQT+HCF  YI++ RC+ AKGE+   C++F   Y++LCP EWVE+W+EQRENGTFP P+
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

P14854 Cytochrome c oxidase subunit 6B1

3.1e-18

52.7

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Query:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        KTAP D RFP  NQTR+C+  Y++FHRC   +TAKG +   CE + + Y++LCP  WV  W+EQR  GTFPG +
Subjt:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Q945L0 Cytochrome c oxidase subunit 6b-2

7.1e-39

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGEES +CERFAKYYRALCPGEWV+KWNEQRE+GTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Q9S7L9 Cytochrome c oxidase subunit 6b-1

3.1e-34

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +I+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++FAK+YR+LCP EWV++WNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Q9SUD3 Cytochrome c oxidase subunit 6b-3

2.1e-38

90.67

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGE++ ECERFAKYYRALCPGEWV+KWNEQRE GTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Arabidopsis top hits

e value

%identity

Alignment

AT1G22450.1 cytochrome C oxidase 6B

2.2e-35

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +I+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++FAK+YR+LCP EWV++WNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein

2.2e-11

39.68

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Query:  APADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEK-WNEQREN
        A  + RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E V K W +   N
Subjt:  APADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEK-WNEQREN

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein

1.5e-39

90.67

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGE++ ECERFAKYYRALCPGEWV+KWNEQRE GTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein

5.0e-40

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Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGEES +CERFAKYYRALCPGEWV+KWNEQRE+GTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Sequences

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CDS sequence

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mRNA sequence

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ATGGGACAAAGATCGAACAATTTTTTATTGTTCAACTTAAGCTGCGTCCTCTTCAACGTTACATTACAGAGTCTTCCGTTTGATCTCCTCAACTTCTTGGAGCTTCAATC
CGATCGGTCATGGCGGAGATTATTTATTTATTTATTTGTTCTATTCCTTCTTGTTTCACCACAGATTGAGCTGAAAACAGCACCTGCTGACTTCCGATTCCCTACTACAA
ATCAAACAAGGCATTGTTTCACTCGTTACATTGAGTTCCACAGGTGCCTGACAGCAAAGGGTGAGGAGTCTGGTGAATGTGAGAGATTTGCAAAGTACTATCGTGCTCTT
TGCCCTGGTGAATGGGTCGAAAAATGGAATGAGCAGAGGGAGAACGGCACTTTCCCCGGCCCTCTTTGAACGAATGTTCATCCCCCGGAAAGCACAGATTGTTAATTTAT
GTTTGTTCTCAAGTTCTATCAAAAAACTGTTTGGGAGTTCCATTATTTTTCATTGCATCTCAGAGAATAATAAACGAATAGCCATTTTGTTTCGTGTCTTTCTTGAGTAG
TTATGACTCAATTGTGTTGATTGTGGACAGGCTGAATTGATCCCAATGCACCTTCTATTTCTCGACCCTTTCTCGTCCATTTTTAGTCCATACCG

Protein sequence

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MGQRSNNFLLFNLSCVLFNVTLQSLPFDLLNFLELQSDRSWRRLFIYLFVLFLLVSPQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRAL
CPGEWVEKWNEQRENGTFPGPL

CaUC11G207100 (gene) of Watermelon (USVL246-FR2) v1 genome