; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G207130 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G207130
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionsequence-specific DNA binding transcription factors;transcription regulators
Genome locationCiama_Chr11:6848384..6848686
RNA-Seq ExpressionCaUC11G207130
SyntenyCaUC11G207130
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651649.1 hypothetical protein Csa_021260, partial [Cucumis sativus]2.3e-3987.5Show/hide
Query:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAA----RTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTS
        MRSIHSFRSRRQAT IS LKP+RRRRIKLLHLPKHTSSST +    RTTPSA MH+RLRNLQRLVPGHTHET+LNHLFQRTADYI ALQLKLNILKDLTS
Subjt:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAA----RTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTS

Query:  FYGL
        FYGL
Subjt:  FYGL
KAG6598843.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3579.05Show/hide
Query:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSST-----AARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLT
        MRSIHSFR RRQAT+ +NLKPTRRRR+KL+HLPK+T+SS+     A  TTPS  MH+RLRNLQRLVPGH H+TDLNHLFQRTADYI ALQLKLNILKDLT
Subjt:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSST-----AARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLT

Query:  SFYGL
        SFYGL
Subjt:  SFYGL
OMP08066.1 hypothetical protein COLO4_06805 [Corchorus olitorius]9.8e-0638Show/hide
Query:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL
        MRS  S R RR+   ++  +  R R+I L +LP + +S + +  T   ++ R+L  LQR++P   +E +++ LFQ TADYIF L+ K+++L++L++FYG+
Subjt:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL
RVW84738.1 hypothetical protein CK203_046707 [Vitis vinifera]9.2e-0436.63Show/hide
Query:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSAT-MHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYG
        MRS  S  S      +  ++ + R+R+KL       SS   A+   S T + R+LR LQ+++PG + + D++ LFQ TA YIF L+ +++ L+ L+SFYG
Subjt:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSAT-MHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYG

Query:  L
        +
Subjt:  L
TrEMBL top hitse value%identityAlignment
A0A0A0LJ57 Uncharacterized protein1.1e-3987.5Show/hide
Query:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAA----RTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTS
        MRSIHSFRSRRQAT IS LKP+RRRRIKLLHLPKHTSSST +    RTTPSA MH+RLRNLQRLVPGHTHET+LNHLFQRTADYI ALQLKLNILKDLTS
Subjt:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAA----RTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTS

Query:  FYGL
        FYGL
Subjt:  FYGL
A0A1R3KLV4 Uncharacterized protein4.7e-0638Show/hide
Query:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL
        MRS  S R RR+   ++  +  R R+I L +LP + +S + +  T   ++ R+L  LQR++P   +E +++ LFQ TADYIF L+ K+++L++L++FYG+
Subjt:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL
A0A438HJV3 Uncharacterized protein4.4e-0436.63Show/hide
Query:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSAT-MHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYG
        MRS  S  S      +  ++ + R+R+KL       SS   A+   S T + R+LR LQ+++PG + + D++ LFQ TA YIF L+ +++ L+ L+SFYG
Subjt:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSAT-MHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYG

Query:  L
        +
Subjt:  L
A0A7N0RGC2 Uncharacterized protein5.8e-0445Show/hide
Query:  RRRIKLLHLPKHTSSSTAARTT---PSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL
        RRR K   +     SS   R T   P+  + RRLR LQR+VPG +H  D+  LF+RTADYI  L+ K+  L++L+S  GL
Subjt:  RRRIKLLHLPKHTSSSTAARTT---PSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL
A0A7N2L281 Uncharacterized protein7.6e-0439Show/hide
Query:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL
        MR+  S   RR+A  +   K  +R R+ L+       +S A  T    T+ R+LR LQ+++PG  +E DL  LF R A+YI +LQ+K+NILK++++ YG+
Subjt:  MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators8.8e-0531.58Show/hide
Query:  LKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDL
        ++  R RR  +  +      S  A   P   +HRR++ L+ LVP       L+ LF++TADYI AL++K+ +++ +
Subjt:  LKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDL
AT3G58850.1 phy rapidly regulated 29.8e-0443.75Show/hide
Query:  MHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSF
        +  ++  LQ +VPG T E  ++ LF+ TA YI ALQ ++N +K LT+F
Subjt:  MHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCTATTCACTCATTCAGATCAAGAAGACAAGCCACCGCCATTTCCAATCTCAAACCAACAAGGAGAAGAAGGATAAAGCTTCTTCACCTTCCAAAGCACACCTC
CTCCTCCACCGCTGCCCGAACAACCCCGTCCGCCACCATGCACAGAAGGCTGAGAAATCTTCAGAGGCTGGTCCCTGGCCACACCCATGAAACCGACCTCAACCACTTGT
TTCAAAGAACTGCAGATTACATCTTTGCTTTACAACTTAAGCTCAACATCCTCAAAGATCTCACTTCTTTCTATGGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCTATTCACTCATTCAGATCAAGAAGACAAGCCACCGCCATTTCCAATCTCAAACCAACAAGGAGAAGAAGGATAAAGCTTCTTCACCTTCCAAAGCACACCTC
CTCCTCCACCGCTGCCCGAACAACCCCGTCCGCCACCATGCACAGAAGGCTGAGAAATCTTCAGAGGCTGGTCCCTGGCCACACCCATGAAACCGACCTCAACCACTTGT
TTCAAAGAACTGCAGATTACATCTTTGCTTTACAACTTAAGCTCAACATCCTCAAAGATCTCACTTCTTTCTATGGCCTTTGA
Protein sequenceShow/hide protein sequence
MRSIHSFRSRRQATAISNLKPTRRRRIKLLHLPKHTSSSTAARTTPSATMHRRLRNLQRLVPGHTHETDLNHLFQRTADYIFALQLKLNILKDLTSFYGL