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CaUC11G207630 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G207630
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr11:8164161..8164821
RNA-Seq ExpressionCaUC11G207630
SyntenyCaUC11G207630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029816.1 Homogentisate phytyltransferase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-1749.56Show/hide
Query:  MDSVFVRAYRSHVPLAAVSSILDFSAGTSASCLSFFFSPSNSMMFSRFSSYSLIEADLIGGIGNGWTNRDVNNVWLPSKNNSSLNLYFLCIYHFRFSSSR
        MDSVFVRAYRSHV                                             +GGIG+GWTNRDVNNVWLPSK NS LN YFLCIY FRFSSS 
Subjt:  MDSVFVRAYRSHVPLAAVSSILDFSAGTSASCLSFFFSPSNSMMFSRFSSYSLIEADLIGGIGNGWTNRDVNNVWLPSKNNSSLNLYFLCIYHFRFSSSR

Query:  ASFNSPMAHAAFL
        +SFNS +AHA F+
Subjt:  ASFNSPMAHAAFL
XP_038889435.1 homogentisate phytyltransferase 1, chloroplastic isoform X1 [Benincasa hispida]5.5e-0439.53Show/hide
Query:  MDSVFVRAYRSHVPLAAVSSILDFSAGTSASCLSFFFSPSNSMMFSRFSSYSLIEADLIGGIGNGWTNRDVNNVWLPSKNNSSLNL
        MDSVFVRAYRSH  LAAV                                         GG+GNGWTNR VNNVWLPS    +L +
Subjt:  MDSVFVRAYRSHVPLAAVSSILDFSAGTSASCLSFFFSPSNSMMFSRFSSYSLIEADLIGGIGNGWTNRDVNNVWLPSKNNSSLNL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCGTGTTCGTTAGAGCATACCGAAGTCATGTTCCTCTTGCCGCTGTCAGTTCAATCTTAGATTTCTCCGCCGGAACTTCTGCATCTTGTTTGAGTTTCTTCTT
TTCCCCCTCTAACTCGATGATGTTCTCGCGATTCTCATCCTATTCCTTGATTGAAGCTGATTTGATAGGTGGGATTGGAAACGGCTGGACGAATCGCGACGTCAACAACG
TTTGGCTTCCAAGTAAGAACAATTCGTCTTTGAATCTTTATTTTCTTTGCATTTATCATTTTCGCTTTTCGTCTTCTCGGGCATCCTTTAATTCGCCAATGGCACACGCA
GCATTCTTGTCATTTTTGCTTTTGGATGAATTAAACCAGTGGAAGGGATTATCCGGGCGGCGGATTCCCTTATAA
mRNA sequenceShow/hide mRNA sequence
TCTCCTTCTCAGAGGAGGAAGCCGTCTTGGCAATGGATTCCGTGTTCGTTAGAGCATACCGAAGTCATGTTCCTCTTGCCGCTGTCAGTTCAATCTTAGATTTCTCCGCC
GGAACTTCTGCATCTTGTTTGAGTTTCTTCTTTTCCCCCTCTAACTCGATGATGTTCTCGCGATTCTCATCCTATTCCTTGATTGAAGCTGATTTGATAGGTGGGATTGG
AAACGGCTGGACGAATCGCGACGTCAACAACGTTTGGCTTCCAAGTAAGAACAATTCGTCTTTGAATCTTTATTTTCTTTGCATTTATCATTTTCGCTTTTCGTCTTCTC
GGGCATCCTTTAATTCGCCAATGGCACACGCAGCATTCTTGTCATTTTTGCTTTTGGATGAATTAAACCAGTGGAAGGGATTATCCGGGCGGCGGATTCCCTTATAA
Protein sequenceShow/hide protein sequence
MDSVFVRAYRSHVPLAAVSSILDFSAGTSASCLSFFFSPSNSMMFSRFSSYSLIEADLIGGIGNGWTNRDVNNVWLPSKNNSSLNLYFLCIYHFRFSSSRASFNSPMAHA
AFLSFLLLDELNQWKGLSGRRIPL