; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G207680 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G207680
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptiontranscription factor bHLH146-like
Genome locationCiama_Chr11:8294438..8295022
RNA-Seq ExpressionCaUC11G207680
SyntenyCaUC11G207680
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011648935.1 transcription factor bHLH146 [Cucumis sativus]2.1e-5773.87Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQ
        M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLV+ISH QQQQNF+KLVKFEVDMAMA SASEF+WGIALKKKLLQR+   +GNGNENGFDFS+Q
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVKCLELQVNVLRGLVETNTF
        TVK + +E    EEE+   EEEEEEEEE              MENGLMKLRKIIPGG +F++GG   EEDDLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVKCLELQVNVLRGLVETNTF

XP_016901419.1 PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]1.9e-5875.25Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFS
        M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLV+ISH QQQQNFQKLV+FEVDMAMA SASEF+WGIALKKKLLQR+     +GNG+ENGFDFS
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFS

Query:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTESYVKCLELQVNVLRGLVETN
        LQT+K    +    EEE+  E+EEEEEEEEEEE           MENGLMKLRKIIPGG DF++GG    EEDDLLKQTESYVKCLELQVNVLRGLVETN
Subjt:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTESYVKCLELQVNVLRGLVETN

Query:  TF
        TF
Subjt:  TF

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]6.0e-5270.41Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQ---QNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ
        MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL +ISHH QQ   QNFQKLVKFEVDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF  SLQ
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQ---QNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         VKFS+                E  E E+EE EE EE EE+K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]7.1e-5370.41Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQ---QNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ
        MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL +ISHH QQ   QNFQKLVKFEVDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF FSLQ
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQ---QNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        TVKFSQ                   E  E E EE EE +E K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

XP_038877916.1 transcription factor bHLH146-like [Benincasa hispida]1.6e-6075.12Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHH------QQQQNFQKLVKFEVDMAMALSAS-EFAWGIALKKKLLQREVGNGNENGFD
        MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVK+LMTSLV+ISHH      QQ+QNFQK VKFEVDMAMA SAS +FAWGIALKKKLLQR+   GNEN FD
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHH------QQQQNFQKLVKFEVDMAMALSAS-EFAWGIALKKKLLQREVGNGNENGFD

Query:  FSLQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        FSLQTVKFSQ                    E   +EEEEE EEEKKME+GLMKLRKIIPGG+DFN+   E+DDLLKQTESYVKCLELQVNVLRGLVETNT
Subjt:  FSLQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0LJA7 Uncharacterized protein1.0e-5773.87Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQ
        M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLV+ISH QQQQNF+KLVKFEVDMAMA SASEF+WGIALKKKLLQR+   +GNGNENGFDFS+Q
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVKCLELQVNVLRGLVETNTF
        TVK + +E    EEE+   EEEEEEEEE              MENGLMKLRKIIPGG +F++GG   EEDDLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESYVKCLELQVNVLRGLVETNTF

A0A1S4DZN3 uncharacterized protein At4g301809.4e-5975.25Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFS
        M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLV+ISH QQQQNFQKLV+FEVDMAMA SASEF+WGIALKKKLLQR+     +GNG+ENGFDFS
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFS

Query:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTESYVKCLELQVNVLRGLVETN
        LQT+K    +    EEE+  E+EEEEEEEEEEE           MENGLMKLRKIIPGG DF++GG    EEDDLLKQTESYVKCLELQVNVLRGLVETN
Subjt:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQTESYVKCLELQVNVLRGLVETN

Query:  TF
        TF
Subjt:  TF

A0A6J1DIU0 transcription factor bHLH1465.1e-4966.16Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQR-EVGNGN-ENGFDFSLQT
        MGRQIVRK  RRVFSLEPNK+ Y MFARNY K LM SL +IS     QN QK+VKFEVDMAMALSASEFAWG ALK+KLLQ+ E GNGN  N FDFSLQT
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQR-EVGNGN-ENGFDFSLQT

Query:  VKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGG---SDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        +KFS+                        E+EEEEEE++KKMENGL+KLRKI+PGG   +D N   LEEDDLLKQTESY+KCLELQVNVLR LV+TNT
Subjt:  VKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGG---SDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1FJ33 transcription factor bHLH146-like2.9e-5270.41Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQ---QNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ
        MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL +ISHH QQ   QNFQKLVKFEVDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF  SLQ
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQ---QNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         VKFS+                E  E E+EE EE EE EE+K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1I0E6 transcription factor bHLH146-like1.4e-4970.41Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHH---QQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ
        MGRQI+RK  +RV SLEP+K+AYTMFARNYVKYLMTSL +ISHH    QQQNFQKLVKFEVDMAMA SA+EF+WG ALKKKLLQRE  NG+ NGF FSL 
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHH---QQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQ

Query:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         VKFS+             E  E E+EE EE EE EE EE+K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  TVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

SwissProt top hitse value%identityAlignment
Q9SUM5 Transcription factor bHLH1462.2e-1231.09Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVK
        M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L ++  +  + + ++ VK EVDMA+ALSA EFAW   L +KL          +     ++ + 
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVK

Query:  FSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
                                  E  ++E   EE  +E  L +L+K++PGG + NV     +++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  FSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

Arabidopsis top hitse value%identityAlignment
AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors2.1e-1035.86Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQI-----SHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFS
        M RQI+ K  +RVFSL+PNK    +FAR YV +L+ +L +I     S    +Q+ ++ VK EVDMA ALSA EFAW   L++KLL         + +D  
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQI-----SHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFS

Query:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        + T               E  E   + +  E+ ++ +EEEE  +++  L +L+K++PGG + N+     +++L +  SY+ CLELQ+ VL+ +V+ NT
Subjt:  LQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators1.5e-1331.09Show/hide
Query:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVK
        M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L ++  +  + + ++ VK EVDMA+ALSA EFAW   L +KL          +     ++ + 
Subjt:  MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVK

Query:  FSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT
                                  E  ++E   EE  +E  L +L+K++PGG + NV     +++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  FSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATC
TTTAGTTCAAATCTCTCATCATCAACAACAACAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTG
CTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGATGGAAAATGGGCTGATGAAGCT
GAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATG
TTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATC
TTTAGTTCAAATCTCTCATCATCAACAACAACAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTG
CTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGATGGAAAATGGGCTGATGAAGCT
GAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATG
TTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA
Protein sequenceShow/hide protein sequence
MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVQISHHQQQQNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEKKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNTF