; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G207690 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G207690
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLa-related protein 6 isoform 1
Genome locationCiama_Chr11:8308328..8313392
RNA-Seq ExpressionCaUC11G207690
SyntenyCaUC11G207690
Gene Ontology termsGO:0034599 - cellular response to oxidative stress (biological process)
GO:0071470 - cellular response to osmotic stress (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451528.1 PREDICTED: uncharacterized protein LOC103492785 [Cucumis melo]8.3e-7883.94Show/hide
Query:  MSLASSQLSFLATAFPFSARSPPRTDN--LLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA
        MSL SSQLSFL+TAF FS  SPPR  N  LL+SS+AVVS KLPPA+DDP G      N+NR+AKLAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASSQLSFLATAFPFSARSPPRTDN--LLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA

Query:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
        APR SSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGG DVLF FILLG+VAAFVRK  GRRE DDD
Subjt:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD

XP_022969609.1 uncharacterized protein LOC111468585 [Cucurbita maxima]1.0e-7581.87Show/hide
Query:  MSLASSQLSFLATAFPF-SARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA
        MSLASSQLSFL+T   F SA +P R++N+LHS + +++SKLPP AD+PNG  ++R N+NRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA
Subjt:  MSLASSQLSFLATAFPF-SARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA

Query:  PRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
        PRSSSPRINNNSRTNIYINPRVAPPLVGGY  GYGVPYY GGWGWSPFSFFAP+P+VAVGIGGGFDVL LFI LGTVAAFVR+F G REEDDD
Subjt:  PRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD

XP_023536753.1 uncharacterized protein LOC111798034 [Cucurbita pepo subsp. pepo]5.0e-7581.35Show/hide
Query:  MSLASSQLSFLATAFPF-SARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA
        MSLASSQLSFL+T   F SA +P R++N+LHS + +++SKLPP ADDPNG  ++R N+NRLAKLAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAA
Subjt:  MSLASSQLSFLATAFPF-SARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA

Query:  PRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
        PRSSSPRINNNSRTNIYINPRVAPPLVGGY  GYGVPYY GGWGWSPFSFFAP+P+VAVGIGGGFDVL LFI LGTVAAFVR+F G R EDDD
Subjt:  PRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD

XP_038889537.1 uncharacterized protein LOC120079434 isoform X1 [Benincasa hispida]3.3e-8789.69Show/hide
Query:  MSLASSQLSFLATA--FPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA
        MSLASSQLSFL+TA  F FS R+P RT+NLLHSSNA VS KLPPAADDPNG L+ R ++NRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASSQLSFLATA--FPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA

Query:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDDY
        APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSP VAVGIGGGFD+LFLFILLGTVAAFVR+FFGRRE+DDDY
Subjt:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDDY

XP_038889538.1 uncharacterized protein LOC120079434 isoform X2 [Benincasa hispida]4.1e-8588.66Show/hide
Query:  MSLASSQLSFLATA--FPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA
        MSLASSQLSFL+TA  F FS R+P RT+NLLHSSNA VS KLPPAADDP GS      +NRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASSQLSFLATA--FPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA

Query:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDDY
        APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSP VAVGIGGGFD+LFLFILLGTVAAFVR+FFGRRE+DDDY
Subjt:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDDY

TrEMBL top hitse value%identityAlignment
A0A1S3BRQ8 uncharacterized protein LOC1034927854.0e-7883.94Show/hide
Query:  MSLASSQLSFLATAFPFSARSPPRTDN--LLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA
        MSL SSQLSFL+TAF FS  SPPR  N  LL+SS+AVVS KLPPA+DDP G      N+NR+AKLAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASSQLSFLATAFPFSARSPPRTDN--LLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA

Query:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
        APR SSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGG DVLF FILLG+VAAFVRK  GRRE DDD
Subjt:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD

A0A5A7U097 La-related protein 6 isoform 14.0e-7883.94Show/hide
Query:  MSLASSQLSFLATAFPFSARSPPRTDN--LLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA
        MSL SSQLSFL+TAF FS  SPPR  N  LL+SS+AVVS KLPPA+DDP G      N+NR+AKLAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASSQLSFLATAFPFSARSPPRTDN--LLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSA

Query:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
        APR SSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGG DVLF FILLG+VAAFVRK  GRRE DDD
Subjt:  APRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD

A0A6J1DIH1 uncharacterized protein LOC1110208181.2e-7480.2Show/hide
Query:  MSLASSQLSF----LATAFPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIK--RENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQA
        M+LASSQ SF    L+ A   +AR P R   LLHSSNA VSSKLPP ADDP+G   K    N+NRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQA
Subjt:  MSLASSQLSF----LATAFPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIK--RENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQA

Query:  FRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
        FRSAAPR SSPRINNNSRTNIYINP VAPPLVGGYGFGYGVPYYGGWGWSPFSFFAP P+VAVGIGGGFD+LFLFI LG+VAA VR+FFG RE+DDD
Subjt:  FRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD

A0A6J1FDE3 uncharacterized protein LOC1114443532.4e-7581.35Show/hide
Query:  MSLASSQLSFLATAFPF-SARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA
        MSLASSQLSFL+T   F SA +P R++N+LHS + +++SKLPP ADDPNG  ++R N+NRLAKLAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAA
Subjt:  MSLASSQLSFLATAFPF-SARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA

Query:  PRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
        PRSSSPRINNNSRTNIYINPRVAPPLVGGY  GYGVPYY GGWGWSPFSFFAP+P+VAVGIGGGFDVL LFI LGTVAAFVR+F G R EDDD
Subjt:  PRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD

A0A6J1I348 uncharacterized protein LOC1114685854.9e-7681.87Show/hide
Query:  MSLASSQLSFLATAFPF-SARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA
        MSLASSQLSFL+T   F SA +P R++N+LHS + +++SKLPP AD+PNG  ++R N+NRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA
Subjt:  MSLASSQLSFLATAFPF-SARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAA

Query:  PRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
        PRSSSPRINNNSRTNIYINPRVAPPLVGGY  GYGVPYY GGWGWSPFSFFAP+P+VAVGIGGGFDVL LFI LGTVAAFVR+F G REEDDD
Subjt:  PRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYY-GGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54520.1 unknown protein3.8e-0434.81Show/hide
Query:  LAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYG---VPYYGGWGWSPFSFFAPSPTVA
        L K AI  +  G+L     + A AA +GGR+GG +F      SS  R +++S +  Y  PR + P      F Y     PYYG    SPF      P V 
Subjt:  LAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGYGFGYG---VPYYGGWGWSPFSFFAPSPTVA

Query:  VGIGGGFDVLFLFILLGTVA-AFVRKFFGRREEDD
         G GG     F  IL+G  A   V  F   R +DD
Subjt:  VGIGGGFDVLFLFILLGTVA-AFVRKFFGRREEDD

AT5G57345.1 unknown protein1.0e-4956.84Show/hide
Query:  SLASSQLSFLATAFPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR
        ++ASS+ SFL+  F F     P+++  L   N++         DD   S   R+N+N+LAKLAI TLA GVL LGSV DA AAK+GGR+GGQAFRS+APR
Subjt:  SLASSQLSFLATAFPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR

Query:  SSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD
           PRINN SRTNIY+NP+VAPPL+GGYG+G     YGG+GWSPFSFFAP P VAVG+GGGFD+L LF+  G  +A  R FF  R ++DD
Subjt:  SSSPRINNNSRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTAGCTTCATCGCAACTCAGCTTTCTCGCCACCGCCTTCCCCTTCTCCGCTCGCAGCCCTCCACGGACCGACAACCTTCTCCATTCTTCCAATGCCGTCGTCTC
TTCCAAACTCCCTCCCGCTGCCGATGATCCCAATGGATCATTAATAAAGAGGGAAAATCAGAATCGGCTGGCGAAGCTTGCGATTGTTACTCTGGCGGCTGGAGTTTTGA
CATTGGGATCAGTTCATGATGCTTCCGCCGCCAAGACTGGCGGCCGAGTCGGCGGCCAGGCTTTCCGTTCAGCGGCTCCTCGGTCTTCGTCCCCGAGAATCAACAATAAT
TCCAGGACAAATATCTACATAAATCCAAGAGTAGCACCTCCTTTAGTGGGTGGCTATGGGTTTGGGTATGGTGTACCATACTATGGTGGATGGGGATGGTCACCATTTTC
ATTCTTTGCACCTTCCCCAACTGTTGCTGTTGGCATTGGAGGAGGTTTTGATGTTCTTTTTCTCTTCATTTTGCTTGGTACTGTTGCAGCTTTTGTGAGGAAATTCTTTG
GAAGAAGGGAAGAAGATGATGATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTAGCTTCATCGCAACTCAGCTTTCTCGCCACCGCCTTCCCCTTCTCCGCTCGCAGCCCTCCACGGACCGACAACCTTCTCCATTCTTCCAATGCCGTCGTCTC
TTCCAAACTCCCTCCCGCTGCCGATGATCCCAATGGATCATTAATAAAGAGGGAAAATCAGAATCGGCTGGCGAAGCTTGCGATTGTTACTCTGGCGGCTGGAGTTTTGA
CATTGGGATCAGTTCATGATGCTTCCGCCGCCAAGACTGGCGGCCGAGTCGGCGGCCAGGCTTTCCGTTCAGCGGCTCCTCGGTCTTCGTCCCCGAGAATCAACAATAAT
TCCAGGACAAATATCTACATAAATCCAAGAGTAGCACCTCCTTTAGTGGGTGGCTATGGGTTTGGGTATGGTGTACCATACTATGGTGGATGGGGATGGTCACCATTTTC
ATTCTTTGCACCTTCCCCAACTGTTGCTGTTGGCATTGGAGGAGGTTTTGATGTTCTTTTTCTCTTCATTTTGCTTGGTACTGTTGCAGCTTTTGTGAGGAAATTCTTTG
GAAGAAGGGAAGAAGATGATGATTATTAA
Protein sequenceShow/hide protein sequence
MSLASSQLSFLATAFPFSARSPPRTDNLLHSSNAVVSSKLPPAADDPNGSLIKRENQNRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNN
SRTNIYINPRVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPTVAVGIGGGFDVLFLFILLGTVAAFVRKFFGRREEDDDY