; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G207790 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G207790
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionB3 domain-containing protein At2g31420-like
Genome locationCiama_Chr11:8466429..8466941
RNA-Seq ExpressionCaUC11G207790
SyntenyCaUC11G207790
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586098.1 hypothetical protein SDJN03_18831, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3250Show/hide
Query:  QNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLN
        +NA  L+T PD+P+ MRKQIEEM+GY+L LVI K+L + D+N+K+GRL L +  +LF F    E +L N+ N          MEVKILDE QR + + L 
Subjt:  QNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLN

Query:  KSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
        K  I+    YCL   W+SFV  N L+ G++IQLWSFRR RL+   N  F SDLYFALN +D R  L
Subjt:  KSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

KAG6586099.1 hypothetical protein SDJN03_18832, partial [Cucurbita argyrosperma subsp. sororia]4.2e-3348.52Show/hide
Query:  SLKQNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSI
        S K+    + + PDIP+ MRK+IE+M GY+L +VI K+L DID+NKK+GR+   + N+ FDF   KE+E+ N+ N         ++EVKI+DEAQR + +
Subjt:  SLKQNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSI

Query:  LLNKSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
        LL K  I+    Y     W+SFVD N L+ GN+IQLWSFRR RL+   N  F SDLYFALN +D R  L
Subjt:  LLNKSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

XP_022938318.1 B3 domain-containing protein At2g31420-like [Cucurbita moschata]5.7e-3050.99Show/hide
Query:  MRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYCLMGV
        MRK+IE+M GY+L +VI K+L DID+NKK+GR+   + N+ FDF   KE+E+ N+ N         ++EVKI+DEAQR + + L K  IE    Y     
Subjt:  MRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYCLMGV

Query:  WSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
        W+SFVD N L+ GN+IQLWSFRR RLI   N  F SDLYFALN +D R  L
Subjt:  WSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

XP_022938320.1 B3 domain-containing protein At1g05930-like [Cucurbita moschata]2.5e-3350.6Show/hide
Query:  QNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLN
        +NA  L+T PD+P+ MRKQIEEM+GY+L LVI K+L + D+N+K+GRL L +  +LFDF    E +L N+ N         +MEVKILDE QR + + L 
Subjt:  QNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLN

Query:  KSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
        K  I+    YCL   W+SFV  N L+ G++IQLWSFRR RL+   N  F SDLYFALN +D R  L
Subjt:  KSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

XP_022969589.1 B3 domain-containing protein At2g31420-like [Cucurbita maxima]2.0e-3051.66Show/hide
Query:  MRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYCLMGV
        MRKQIE+M GY+L +VI K+L DID+NKK+GR+   + N+ FDF   KE+EL N+ N         +MEVKI+DEAQR + + L K  I+    Y     
Subjt:  MRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYCLMGV

Query:  WSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
        W+SFVD N L+ GN+IQLWSFRR RL+   N  F SDLYFALN +D R  L
Subjt:  WSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

TrEMBL top hitse value%identityAlignment
A0A6J1FDQ3 B3 domain-containing protein At2g31420-like2.6e-2849.68Show/hide
Query:  IPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYC
        +P+ MRKQIE+M GY+L LVI K+L + D+N+K GRL   +  + FDF    E+EL N+ N         +MEVKI+DEAQR + + L K  I++Q  Y 
Subjt:  IPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYC

Query:  LMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
            W+SFVD N L+ G++IQLWSFRR RL+   N  F SDLYFALN VD R  L
Subjt:  LMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

A0A6J1FIJ8 B3 domain-containing protein At2g31420-like2.7e-3050.99Show/hide
Query:  MRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYCLMGV
        MRK+IE+M GY+L +VI K+L DID+NKK+GR+   + N+ FDF   KE+E+ N+ N         ++EVKI+DEAQR + + L K  IE    Y     
Subjt:  MRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYCLMGV

Query:  WSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
        W+SFVD N L+ GN+IQLWSFRR RLI   N  F SDLYFALN +D R  L
Subjt:  WSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

A0A6J1FJF6 B3 domain-containing protein At1g05930-like1.2e-3350.6Show/hide
Query:  QNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLN
        +NA  L+T PD+P+ MRKQIEEM+GY+L LVI K+L + D+N+K+GRL L +  +LFDF    E +L N+ N         +MEVKILDE QR + + L 
Subjt:  QNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLN

Query:  KSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
        K  I+    YCL   W+SFV  N L+ G++IQLWSFRR RL+   N  F SDLYFALN +D R  L
Subjt:  KSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

A0A6J1H5Z0 putative B3 domain-containing protein At3g248503.3e-2342.48Show/hide
Query:  TRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQ
        T PD+P+ MR +I EM  Y + L IQKQL+D D+NK  GRL  P   L  DF   +ER +     N G    ++ M V I+D   RE+SI L    I + 
Subjt:  TRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQ

Query:  YYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIPSNRTFVSDLYFALNKVD
          YCLM  W+S V+ N  ++G+ +QLWSFR++ L    +T VS L FA+ K+D
Subjt:  YYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIPSNRTFVSDLYFALNKVD

A0A6J1I325 B3 domain-containing protein At2g31420-like9.5e-3151.66Show/hide
Query:  MRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYCLMGV
        MRKQIE+M GY+L +VI K+L DID+NKK+GR+   + N+ FDF   KE+EL N+ N         +MEVKI+DEAQR + + L K  I+    Y     
Subjt:  MRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLNKSIIENQYYYCLMGV

Query:  WSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL
        W+SFVD N L+ GN+IQLWSFRR RL+   N  F SDLYFALN +D R  L
Subjt:  WSSFVDTNFLRTGNIIQLWSFRRERLIP-SNRTFVSDLYFALNKVDHRICL

SwissProt top hitse value%identityAlignment
Q5RM09 B3 domain-containing protein At1g059201.1e-0425.81Show/hide
Query:  PDIPSGMRKQIEEMKGY-HLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKERELFN-----NNNNNGINKMERIMEVKILDEAQRETSILLNKS
        P  P  + + +  M G     L+I+K L+  D++ ++ RL +P+N ++  DF    E  L +     N  N G+         K  +   ++  +  +  
Subjt:  PDIPSGMRKQIEEMKGY-HLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKERELFN-----NNNNNGINKMERIMEVKILDEAQRETSILLNKS

Query:  IIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRE-----RLIPSNRTFVSDL
           + + + L G WS+ V+TN L+ G+ I LWSFR        L+P   + V  L
Subjt:  IIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRE-----RLIPSNRTFVSDL

Q9FLV7 B3 domain-containing protein At5g240503.9e-0529.79Show/hide
Query:  TRPDIPSGMRKQIEEMK-GYHLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKE----RELFNNNNNNGINKMERIMEVKILDEAQRETSILL--
        T  + P  + K +  MK      L+ +K L   D+N  + RL +P NNLL  DF    E     E  NNNN  G+  +       ++D+  ++  ++L  
Subjt:  TRPDIPSGMRKQIEEMK-GYHLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKE----RELFNNNNNNGINKMERIMEVKILDEAQRETSILL--

Query:  ---NKSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFR
            K   +  + Y L+  W+  V+ N L+ G+ I LWSFR
Subjt:  ---NKSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFR

Q9LRX6 Putative B3 domain-containing protein At3g248502.9e-0529.08Show/hide
Query:  TRPDIPSGMRKQIEEMK-GYHLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKE----RELFNNNNNNGINKMERIMEVKILDEAQRETSILLNK
        T  D P  + K + +MK      L+ +K L   DIN  + RL +P NNLL  DF    E    +E  NNN   G+  +       ++D+   +  ++L +
Subjt:  TRPDIPSGMRKQIEEMK-GYHLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKE----RELFNNNNNNGINKMERIMEVKILDEAQRETSILLNK

Query:  SIIENQ-----YYYCLMGVWSSFVDTNFLRTGNIIQLWSFR
          ++ +     + Y L+  W+  V+ N L+ G+ I +WSFR
Subjt:  SIIENQ-----YYYCLMGVWSSFVDTNFLRTGNIIQLWSFR

Arabidopsis top hitse value%identityAlignment
AT1G05920.1 Domain of unknown function (DUF313)8.0e-0625.81Show/hide
Query:  PDIPSGMRKQIEEMKGY-HLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKERELFN-----NNNNNGINKMERIMEVKILDEAQRETSILLNKS
        P  P  + + +  M G     L+I+K L+  D++ ++ RL +P+N ++  DF    E  L +     N  N G+         K  +   ++  +  +  
Subjt:  PDIPSGMRKQIEEMKGY-HLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKERELFN-----NNNNNGINKMERIMEVKILDEAQRETSILLNKS

Query:  IIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRE-----RLIPSNRTFVSDL
           + + + L G WS+ V+TN L+ G+ I LWSFR        L+P   + V  L
Subjt:  IIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRE-----RLIPSNRTFVSDL

AT3G24850.1 Domain of unknown function (DUF313)2.1e-0629.08Show/hide
Query:  TRPDIPSGMRKQIEEMK-GYHLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKE----RELFNNNNNNGINKMERIMEVKILDEAQRETSILLNK
        T  D P  + K + +MK      L+ +K L   DIN  + RL +P NNLL  DF    E    +E  NNN   G+  +       ++D+   +  ++L +
Subjt:  TRPDIPSGMRKQIEEMK-GYHLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKE----RELFNNNNNNGINKMERIMEVKILDEAQRETSILLNK

Query:  SIIENQ-----YYYCLMGVWSSFVDTNFLRTGNIIQLWSFR
          ++ +     + Y L+  W+  V+ N L+ G+ I +WSFR
Subjt:  SIIENQ-----YYYCLMGVWSSFVDTNFLRTGNIIQLWSFR

AT5G24050.1 Domain of unknown function (DUF313)2.7e-0629.79Show/hide
Query:  TRPDIPSGMRKQIEEMK-GYHLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKE----RELFNNNNNNGINKMERIMEVKILDEAQRETSILL--
        T  + P  + K +  MK      L+ +K L   D+N  + RL +P NNLL  DF    E     E  NNNN  G+  +       ++D+  ++  ++L  
Subjt:  TRPDIPSGMRKQIEEMK-GYHLHLVIQKQLEDIDINKKEGRLCLPLNNLL-FDFTNHKE----RELFNNNNNNGINKMERIMEVKILDEAQRETSILL--

Query:  ---NKSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFR
            K   +  + Y L+  W+  V+ N L+ G+ I LWSFR
Subjt:  ---NKSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGCTTGAAGCAAAATGCAATAGAGTTATTAACAAGGCCAGACATTCCAAGTGGTATGAGAAAGCAAATTGAAGAGATGAAAGGATATCATCTTCATTTG
GTGATTCAAAAGCAATTAGAAGACATTGATATCAACAAGAAAGAAGGTCGTTTATGTCTTCCATTAAATAATCTCTTATTCGATTTCACCAACCACAAGGAGAGG
GAGCTCTTTAACAACAACAATAATAATGGAATCAACAAAATGGAGAGAATAATGGAAGTCAAGATTCTTGATGAGGCTCAAAGAGAAACCTCAATTTTGTTGAAC
AAATCCATCATTGAAAACCAATATTACTATTGTTTGATGGGTGTTTGGAGTTCGTTTGTGGACACTAATTTCTTGCGAACTGGAAACATCATCCAACTTTGGAGC
TTTAGAAGAGAGAGATTGATCCCTTCTAATAGAACATTTGTCTCTGATCTTTACTTTGCCTTGAATAAAGTTGACCATCGAATTTGTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAGCTTGAAGCAAAATGCAATAGAGTTATTAACAAGGCCAGACATTCCAAGTGGTATGAGAAAGCAAATTGAAGAGATGAAAGGATATCATCTTCATTTG
GTGATTCAAAAGCAATTAGAAGACATTGATATCAACAAGAAAGAAGGTCGTTTATGTCTTCCATTAAATAATCTCTTATTCGATTTCACCAACCACAAGGAGAGG
GAGCTCTTTAACAACAACAATAATAATGGAATCAACAAAATGGAGAGAATAATGGAAGTCAAGATTCTTGATGAGGCTCAAAGAGAAACCTCAATTTTGTTGAAC
AAATCCATCATTGAAAACCAATATTACTATTGTTTGATGGGTGTTTGGAGTTCGTTTGTGGACACTAATTTCTTGCGAACTGGAAACATCATCCAACTTTGGAGC
TTTAGAAGAGAGAGATTGATCCCTTCTAATAGAACATTTGTCTCTGATCTTTACTTTGCCTTGAATAAAGTTGACCATCGAATTTGTCTTTAG
Protein sequenceShow/hide protein sequence
MTSLKQNAIELLTRPDIPSGMRKQIEEMKGYHLHLVIQKQLEDIDINKKEGRLCLPLNNLLFDFTNHKERELFNNNNNNGINKMERIMEVKILDEAQRETSILLN
KSIIENQYYYCLMGVWSSFVDTNFLRTGNIIQLWSFRRERLIPSNRTFVSDLYFALNKVDHRICL