; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G207930 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G207930
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDNA ligase
Genome locationCiama_Chr11:8853192..8867899
RNA-Seq ExpressionCaUC11G207930
SyntenyCaUC11G207930
Gene Ontology termsGO:0006302 - double-strand break repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0051103 - DNA ligation involved in DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003910 - DNA ligase (ATP) activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR012308 - DNA ligase, ATP-dependent, N-terminal
IPR012310 - DNA ligase, ATP-dependent, central
IPR029710 - DNA ligase 4
IPR036599 - DNA ligase, ATP-dependent, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451172.1 PREDICTED: DNA ligase 4 isoform X2 [Cucumis melo]8.3e-12164.65Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        MSE IKF+VLSSLFDWIQRSKSSAKKRSKFRKFLDTFC+P+ YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSR+SDDALRLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        NAGNFALVAAEVLQRRQGMTPGGLTI ELNDLLDRLASGENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDVIVQNVLSTRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLR+VVKPVKGQLE+LVPN GLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

XP_022929706.1 DNA ligase 4 [Cucurbita moschata]1.3e-12164.9Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        M+ELIKFSVLSSLFDWIQRSKSSAKKRSKFRKF+DTFC+PADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRES+DALRLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        N GNFALVAAEVLQRRQGMTPGGL IKELNDLLDRLA  ENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDVIVQNVL+TRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

XP_022996609.1 DNA ligase 4 [Cucurbita maxima]1.3e-12164.9Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        M+ELIKFSVLSSLFDWIQRSKSSAKKRSKFRKF+DTFC+PADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRES+DALRLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        N GNFALVAAEVLQRRQGMTPGGL IKELNDLLDRLA  ENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDVIVQNVL+TRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

XP_038889084.1 DNA ligase 4 isoform X1 [Benincasa hispida]5.2e-12365.66Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        MSE IKF VLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILP+LDRERGTYGLKESVLATCLIDALGMSRESDDA RLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDV+V NVLSTRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

XP_038889085.1 DNA ligase 4 isoform X2 [Benincasa hispida]5.2e-12365.66Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        MSE IKF VLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILP+LDRERGTYGLKESVLATCLIDALGMSRESDDA RLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDV+V NVLSTRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

TrEMBL top hitse value%identityAlignment
A0A1S3BQX9 DNA ligase4.0e-12164.65Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        MSE IKF+VLSSLFDWIQRSKSSAKKRSKFRKFLDTFC+P+ YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSR+SDDALRLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        NAGNFALVAAEVLQRRQGMTPGGLTI ELNDLLDRLASGENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDVIVQNVLSTRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLR+VVKPVKGQLE+LVPN GLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

A0A1S3BRM3 DNA ligase4.0e-12164.65Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        MSE IKF+VLSSLFDWIQRSKSSAKKRSKFRKFLDTFC+P+ YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSR+SDDALRLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        NAGNFALVAAEVLQRRQGMTPGGLTI ELNDLLDRLASGENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDVIVQNVLSTRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLR+VVKPVKGQLE+LVPN GLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

A0A1S4E0Q0 DNA ligase4.0e-12164.65Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        MSE IKF+VLSSLFDWIQRSKSSAKKRSKFRKFLDTFC+P+ YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSR+SDDALRLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        NAGNFALVAAEVLQRRQGMTPGGLTI ELNDLLDRLASGENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDVIVQNVLSTRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLR+VVKPVKGQLE+LVPN GLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

A0A6J1ENX2 DNA ligase6.2e-12264.9Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        M+ELIKFSVLSSLFDWIQRSKSSAKKRSKFRKF+DTFC+PADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRES+DALRLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        N GNFALVAAEVLQRRQGMTPGGL IKELNDLLDRLA  ENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDVIVQNVL+TRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

A0A6J1K974 DNA ligase6.2e-12264.9Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA
        M+ELIKFSVLSSLFDWIQRSKSSAKKRSKFRKF+DTFC+PADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRES+DALRLINWRKGGAKTGA
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGA

Query:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ
        N GNFALVAAEVLQRRQGMTPGGL IKELNDLLDRLA  ENR   T  L  L   +  QE                                    C ++
Subjt:  NAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPMQ

Query:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD
        +                                        LHGK                          RNFLDHSEYGHGMSDVIVQNVL+TRCILD
Subjt:  M----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCILD

Query:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
        GEMLVWDKSLNRFAEFGSNQEI        ARAAKDGFDSNRQ   VAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA
Subjt:  GEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCA

SwissProt top hitse value%identityAlignment
P49917 DNA ligase 46.6e-2040.24Show/hide
Query:  IKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPAD------------YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWR
        + F+ L S  + IQ+SK  A+K   FR+FLD++    D            ++ A+RLILP L+RER  YG+KE++LA   I+ L + R+  DAL+L+N+R
Subjt:  IKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPAD------------YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWR

Query:  KGGAKTGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENRTLKLEKLYDPSWLQ
             T  +AG+FA++A  VL+ R  +  G LTI+++NDLLD +AS  N + K + L   S LQ
Subjt:  KGGAKTGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENRTLKLEKLYDPSWLQ

Q5R6L3 DNA ligase 46.6e-2040.24Show/hide
Query:  IKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPAD------------YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWR
        + F+ L S  + IQ+SK  A+K   FR+FLD++    D            ++ A+RLILP L+RER  YG+KE++LA   I+ L + R+  DAL+L+N+R
Subjt:  IKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPAD------------YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWR

Query:  KGGAKTGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENRTLKLEKLYDPSWLQ
             T  +AG+FA++A  VL+ R  +  G LTI+++NDLLD +AS  N + K + L   S LQ
Subjt:  KGGAKTGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENRTLKLEKLYDPSWLQ

Q7X7E9 Putative DNA ligase 41.9e-7240.97Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPA---DYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAK
        M+  ++F +L ++F  + R +++AKKR++ R  LD    P    DYFSA+RL+LP LDRERG+YGLKE+ LA+ L+DALG++++S DA+RL NWR+GG  
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPA---DYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAK

Query:  TGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENRT-LKLEKL----------------------YDPSWL-------------------
           NAGNFALVAAEVLQRRQGMT GGLTIKE+ND LDRLA+ EN   L+ EKL                       +  WL                   
Subjt:  TGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENRT-LKLEKL----------------------YDPSWL-------------------

Query:  -----------QECPMQM----------------------------------------LHGK--------------------------RNFLDHSEYGHG
                     C +++                                        LHGK                          R+FLDHSEY  G
Subjt:  -----------QECPMQM----------------------------------------LHGK--------------------------RNFLDHSEYGHG

Query:  MSDVIVQNVLSTRCILDGEMLVWDKSLNRFAEFGSNQE---------------------IDSFITSFAAR--AAKDGFDSNRQRIDVAFDVLYVGDTSVI
        MS VI++N+L  RCILDGEMLVWD  LNRFAEFGSNQE                     I S++ +      + +D F SN++   VAFD+LY GDTSVI
Subjt:  MSDVIVQNVLSTRCILDGEMLVWDKSLNRFAEFGSNQE---------------------IDSFITSFAAR--AAKDGFDSNRQRIDVAFDVLYVGDTSVI

Query:  HRSLKERHELLRDVVKPVKGQLEILVPNGGLN
        H+SL ERHE+L+ VV+P+KG LEILVP GGLN
Subjt:  HRSLKERHELLRDVVKPVKGQLEILVPNGGLN

Q8BTF7 DNA ligase 42.8e-1839.39Show/hide
Query:  IKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPAD------------YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWR
        + F+ L S  + IQ+ K  A+K   F++FLD++    D            ++ A+RLILP L+RER  YG+KE++LA   I+ L + RE  DA +L+N+R
Subjt:  IKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPAD------------YFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWR

Query:  -KGGAKTGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENRTLKLEKLYDPSWLQ
           GA+T  +AG+FA++A  VL+ R  +  G LTI+++N+LLD +AS  N + K + L   S LQ
Subjt:  -KGGAKTGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENRTLKLEKLYDPSWLQ

Q9LL84 DNA ligase 42.4e-10254.71Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGG-AKTG
        M+E IKFSVL SLF+WIQ+SK+S++KRSKFRKFLDT+C P+DYF A+RLI+PSLDRERG+YGLKESVLATCLIDALG+SR++ DA+RL+NWRKGG AK G
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGG-AKTG

Query:  ANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPM
        ANAGNF+L+AAEVLQRRQGM  GGLTIKELNDLLDRLAS ENR   TL L  L   +  QE                                    C +
Subjt:  ANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPM

Query:  QM----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCIL
        ++                                        LHGK                          RNFLDHSEY H MSD+IVQN+L  +CIL
Subjt:  QM----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCIL

Query:  DGEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLN
        DGEMLVWD SLNRFAEFGSNQEI        A+AA++G DS++Q   VAFDVLYVGDTSVIH+SLKERHELL+ VVKP+KG+LE+LVP GGLN
Subjt:  DGEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLN

Arabidopsis top hitse value%identityAlignment
AT5G57160.1 DNA ligase IV1.7e-10354.71Show/hide
Query:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGG-AKTG
        M+E IKFSVL SLF+WIQ+SK+S++KRSKFRKFLDT+C P+DYF A+RLI+PSLDRERG+YGLKESVLATCLIDALG+SR++ DA+RL+NWRKGG AK G
Subjt:  MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGG-AKTG

Query:  ANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPM
        ANAGNF+L+AAEVLQRRQGM  GGLTIKELNDLLDRLAS ENR   TL L  L   +  QE                                    C +
Subjt:  ANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLASGENR---TLKLEKLYDPSWLQE------------------------------------CPM

Query:  QM----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCIL
        ++                                        LHGK                          RNFLDHSEY H MSD+IVQN+L  +CIL
Subjt:  QM----------------------------------------LHGK--------------------------RNFLDHSEYGHGMSDVIVQNVLSTRCIL

Query:  DGEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLN
        DGEMLVWD SLNRFAEFGSNQEI        A+AA++G DS++Q   VAFDVLYVGDTSVIH+SLKERHELL+ VVKP+KG+LE+LVP GGLN
Subjt:  DGEMLVWDKSLNRFAEFGSNQEIDSFITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAACTGATCAAGTTCAGTGTGCTTTCAAGTTTGTTTGATTGGATTCAGCGAAGCAAATCTTCCGCCAAGAAGCGTTCCAAGTTCCGTAAGTTTCTCGACACTTT
CTGCACTCCTGCTGACTATTTTTCCGCCATCCGGTTGATTCTGCCTAGCCTCGATCGGGAACGCGGCACCTATGGCCTCAAGGAGTCTGTACTCGCCACTTGCCTCATTG
ACGCTCTTGGCATGTCTAGAGAGTCTGATGACGCTCTTCGTCTTATCAACTGGCGTAAAGGTGGTGCTAAGACTGGTGCTAATGCCGGTAATTTCGCTCTTGTTGCGGCT
GAGGTATTGCAGCGCAGGCAAGGAATGACCCCTGGTGGTTTAACAATTAAAGAGTTGAATGATTTGCTGGACCGGTTGGCTTCAGGTGAAAACAGGACATTGAAGTTGGA
AAAGCTGTACGACCCCAGCTGGCTTCAAGAGTGTCCAATGCAAATGCTGCATGGAAAAAGGAACTTTCTCGATCACTCAGAATATGGACATGGAATGTCTGATGTTATTG
TTCAAAATGTTCTTTCCACTAGGTGTATACTTGATGGTGAAATGTTGGTGTGGGATAAATCTTTAAACCGTTTTGCAGAGTTTGGCTCAAACCAGGAAATAGACTCCTTT
ATCACCTCATTTGCAGCAAGGGCAGCGAAGGATGGATTTGACAGCAATCGCCAGAGGATAGATGTTGCGTTTGATGTTCTTTATGTTGGAGATACTAGTGTTATTCACAG
GAGTTTGAAAGAAAGACATGAACTTCTCAGAGATGTTGTCAAGCCTGTGAAGGGTCAACTGGAAATCTTAGTACCTAATGGTGGTCTTAATAGTGACTGTGCTGACTTGT
ACATGACTGGCAGCGTTTGTATCTTGTCTTATATGTCAATTCTATCCATGTGTTTTAGGTTATTAATCTGGTCTGAAAACCCCTCTTCTCCTCCTTTTCTCTTCAAGAAA
TCCACCCTTACCTTGCCTAATTCAAATTCTACTTTTTTGAGAAGTACTCGTTGCATCTTAGAAGACCCTAATCTAAGAAATGAAGAAGATTCCAACATTGGTTCAATAGC
AAGTGTTAGTAGCGAGGATTTAGATGATATTGAAGCATTAGATCATCACGAGGTTTCGGATCAACCTGAAGTTACTGGAGAAGATATTAATGCCTTGTTCTCTCAAAATG
AAACTTTGAACGAATTAAAATTCAGAAACCATTCTTTCATTCCCCCCAATCATCTGGAATTGCCGACACTTTGGCATCCTTCGTTGAAGAATGTGGTCTTGTCTTTGGAT
AGACCATTAAGTCTCGCGAAAGTCTGTTCGTAG
mRNA sequenceShow/hide mRNA sequence
GCAATTGGCAATGCAATTGTTAGTGGAGAAGCCACGCAAATGATTCATTGAAACCGTCTGACTTCTCACCTCCTTCTCCGAGCGACGAATTCCAACTTCCAAGTTCCAAC
ATTGGAAAAATCTCAACCCGCGAAGACGAAGACCTCCTCTGGCCATGTCAGAACTGATCAAGTTCAGTGTGCTTTCAAGTTTGTTTGATTGGATTCAGCGAAGCAAATCT
TCCGCCAAGAAGCGTTCCAAGTTCCGTAAGTTTCTCGACACTTTCTGCACTCCTGCTGACTATTTTTCCGCCATCCGGTTGATTCTGCCTAGCCTCGATCGGGAACGCGG
CACCTATGGCCTCAAGGAGTCTGTACTCGCCACTTGCCTCATTGACGCTCTTGGCATGTCTAGAGAGTCTGATGACGCTCTTCGTCTTATCAACTGGCGTAAAGGTGGTG
CTAAGACTGGTGCTAATGCCGGTAATTTCGCTCTTGTTGCGGCTGAGGTATTGCAGCGCAGGCAAGGAATGACCCCTGGTGGTTTAACAATTAAAGAGTTGAATGATTTG
CTGGACCGGTTGGCTTCAGGTGAAAACAGGACATTGAAGTTGGAAAAGCTGTACGACCCCAGCTGGCTTCAAGAGTGTCCAATGCAAATGCTGCATGGAAAAAGGAACTT
TCTCGATCACTCAGAATATGGACATGGAATGTCTGATGTTATTGTTCAAAATGTTCTTTCCACTAGGTGTATACTTGATGGTGAAATGTTGGTGTGGGATAAATCTTTAA
ACCGTTTTGCAGAGTTTGGCTCAAACCAGGAAATAGACTCCTTTATCACCTCATTTGCAGCAAGGGCAGCGAAGGATGGATTTGACAGCAATCGCCAGAGGATAGATGTT
GCGTTTGATGTTCTTTATGTTGGAGATACTAGTGTTATTCACAGGAGTTTGAAAGAAAGACATGAACTTCTCAGAGATGTTGTCAAGCCTGTGAAGGGTCAACTGGAAAT
CTTAGTACCTAATGGTGGTCTTAATAGTGACTGTGCTGACTTGTACATGACTGGCAGCGTTTGTATCTTGTCTTATATGTCAATTCTATCCATGTGTTTTAGGTTATTAA
TCTGGTCTGAAAACCCCTCTTCTCCTCCTTTTCTCTTCAAGAAATCCACCCTTACCTTGCCTAATTCAAATTCTACTTTTTTGAGAAGTACTCGTTGCATCTTAGAAGAC
CCTAATCTAAGAAATGAAGAAGATTCCAACATTGGTTCAATAGCAAGTGTTAGTAGCGAGGATTTAGATGATATTGAAGCATTAGATCATCACGAGGTTTCGGATCAACC
TGAAGTTACTGGAGAAGATATTAATGCCTTGTTCTCTCAAAATGAAACTTTGAACGAATTAAAATTCAGAAACCATTCTTTCATTCCCCCCAATCATCTGGAATTGCCGA
CACTTTGGCATCCTTCGTTGAAGAATGTGGTCTTGTCTTTGGATAGACCATTAAGTCTCGCGAAAGTCTGTTCGTAG
Protein sequenceShow/hide protein sequence
MSELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCTPADYFSAIRLILPSLDRERGTYGLKESVLATCLIDALGMSRESDDALRLINWRKGGAKTGANAGNFALVAA
EVLQRRQGMTPGGLTIKELNDLLDRLASGENRTLKLEKLYDPSWLQECPMQMLHGKRNFLDHSEYGHGMSDVIVQNVLSTRCILDGEMLVWDKSLNRFAEFGSNQEIDSF
ITSFAARAAKDGFDSNRQRIDVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGQLEILVPNGGLNSDCADLYMTGSVCILSYMSILSMCFRLLIWSENPSSPPFLFKK
STLTLPNSNSTFLRSTRCILEDPNLRNEEDSNIGSIASVSSEDLDDIEALDHHEVSDQPEVTGEDINALFSQNETLNELKFRNHSFIPPNHLELPTLWHPSLKNVVLSLD
RPLSLAKVCS