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CaUC11G208280 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G208280
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionEnzymatic polyprotein
Genome locationCiama_Chr11:10117566..10121733
RNA-Seq ExpressionCaUC11G208280
SyntenyCaUC11G208280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037876.1 zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa]6.0e-0447.37Show/hide
Query:  VIARCVNTFVRHYIACT------------RLQCQKMSNYKGYKDTFMARLYNLTTCG
        ++ + + T  +H+I  T            RL+C KMS YK YKDTFMARLY LTTCG
Subjt:  VIARCVNTFVRHYIACT------------RLQCQKMSNYKGYKDTFMARLYNLTTCG

TrEMBL top hitse value%identityAlignment
A0A5A7T6R6 Zf-CCHC domain-containing protein/MP domain-containing protein2.9e-0447.37Show/hide
Query:  VIARCVNTFVRHYIACT------------RLQCQKMSNYKGYKDTFMARLYNLTTCG
        ++ + + T  +H+I  T            RL+C KMS YK YKDTFMARLY LTTCG
Subjt:  VIARCVNTFVRHYIACT------------RLQCQKMSNYKGYKDTFMARLYNLTTCG

A0A5A7UR29 Enzymatic polyprotein8.5e-0445.61Show/hide
Query:  VIARCVNTFVRHYIACTR------------LQCQKMSNYKGYKDTFMARLYNLTTCG
        ++ + + T  +H+I  T+            L+C KMS YK YKDTFMARLY LTTCG
Subjt:  VIARCVNTFVRHYIACTR------------LQCQKMSNYKGYKDTFMARLYNLTTCG

A0A5A7URX9 Enzymatic polyprotein8.5e-0445.61Show/hide
Query:  VIARCVNTFVRHYIACTR------------LQCQKMSNYKGYKDTFMARLYNLTTCG
        ++ + + T  +H+I  T+            L+C KMS YK YKDTFMARLY LTTCG
Subjt:  VIARCVNTFVRHYIACTR------------LQCQKMSNYKGYKDTFMARLYNLTTCG

A0A5D3BEY3 Enzymatic polyprotein8.5e-0445.61Show/hide
Query:  VIARCVNTFVRHYIACTR------------LQCQKMSNYKGYKDTFMARLYNLTTCG
        ++ + + T  +H+I  T+            L+C KMS YK YKDTFMARLY LTTCG
Subjt:  VIARCVNTFVRHYIACTR------------LQCQKMSNYKGYKDTFMARLYNLTTCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTGATGCTTGTCTTCTTGTTGTTCAACTTGGCATGCTTGCCCACTTATCTTGGTGTGTTGGATGATGCACCGTCCTCCTCGGTCGTATCACGACACTTTTCTTG
GTCCTCTGTCATTGCCAGATGTGTCAACACTTTTGTGCGCCACTACATTGCCTGCACAAGACTACAATGCCAAAAGATGAGCAACTACAAAGGGTATAAAGACACTTTTA
TGGCACGTCTTTATAACCTTACAACATGTGGTGAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACTGATGCTTGTCTTCTTGTTGTTCAACTTGGCATGCTTGCCCACTTATCTTGGTGTGTTGGATGATGCACCGTCCTCCTCGGTCGTATCACGACACTTTTCTTG
GTCCTCTGTCATTGCCAGATGTGTCAACACTTTTGTGCGCCACTACATTGCCTGCACAAGACTACAATGCCAAAAGATGAGCAACTACAAAGGGTATAAAGACACTTTTA
TGGCACGTCTTTATAACCTTACAACATGTGGTGAAGCTTAG
Protein sequenceShow/hide protein sequence
MALMLVFLLFNLACLPTYLGVLDDAPSSSVVSRHFSWSSVIARCVNTFVRHYIACTRLQCQKMSNYKGYKDTFMARLYNLTTCGEA