CuGenDBv2

Gene ID	CaUC11G208830
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	biotin--protein ligase 2-like isoform X3
Genome location	Ciama_Chr11:11881088..11888238
RNA-Seq Expression	CaUC11G208830
Synteny	CaUC11G208830
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008447538.1 PREDICTED: biotin--protein ligase 2-like isoform X3 [Cucumis melo]

2.5e-31

66.1

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        FRALEELYYQTWLHSGQRV VQEKKEDQVVENV                                   + +Q FACFFIQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNSLDFFKGLIKSKL
Subjt:  HPDGNSLDFFKGLIKSKL

XP_008447539.1 PREDICTED: biotin--protein ligase 2-like isoform X4 [Cucumis melo]

9.1e-26

61.02

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        FRALEELYYQTWLHSGQRV VQEKKEDQVVENV                                             IQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNSLDFFKGLIKSKL
Subjt:  HPDGNSLDFFKGLIKSKL

XP_016900372.1 PREDICTED: biotin--protein ligase 2-like isoform X1 [Cucumis melo]

7.7e-25

58.77

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        FRALEELYYQTWLHSGQRV VQEKKEDQVVENV                                   + +Q FACFFIQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLI
        HPDGNS      L+
Subjt:  HPDGNSLDFFKGLI

XP_022141438.1 biotin--protein ligase 2-like isoform X1 [Momordica charantia]

4.5e-25

59.32

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F+ALEELYYQTWLHSGQRV VQEKKEDQVVENV                                             IQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNSLDFFKGL+KSKL
Subjt:  HPDGNSLDFFKGLIKSKL

XP_022141440.1 biotin--protein ligase 1, chloroplastic-like isoform X2 [Momordica charantia]

4.5e-25

59.32

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F+ALEELYYQTWLHSGQRV VQEKKEDQVVENV                                             IQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNSLDFFKGL+KSKL
Subjt:  HPDGNSLDFFKGLIKSKL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BH31 biotin--protein ligase 2-like isoform X4

4.4e-26

61.02

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        FRALEELYYQTWLHSGQRV VQEKKEDQVVENV                                             IQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNSLDFFKGLIKSKL
Subjt:  HPDGNSLDFFKGLIKSKL

A0A1S3BIK3 biotin--protein ligase 2-like isoform X3

1.2e-31

66.1

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        FRALEELYYQTWLHSGQRV VQEKKEDQVVENV                                   + +Q FACFFIQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNSLDFFKGLIKSKL
Subjt:  HPDGNSLDFFKGLIKSKL

A0A1S4DWK7 biotin--protein ligase 2-like isoform X1

3.7e-25

58.77

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        FRALEELYYQTWLHSGQRV VQEKKEDQVVENV                                   + +Q FACFFIQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLI
        HPDGNS      L+
Subjt:  HPDGNSLDFFKGLI

A0A6J1CI37 biotin--protein ligase 1, chloroplastic-like isoform X2

2.2e-25

59.32

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F+ALEELYYQTWLHSGQRV VQEKKEDQVVENV                                             IQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNSLDFFKGL+KSKL
Subjt:  HPDGNSLDFFKGLIKSKL

A0A6J1CKH6 biotin--protein ligase 2-like isoform X1

2.2e-25

59.32

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F+ALEELYYQTWLHSGQRV VQEKKEDQVVENV                                             IQGLTSSGYLLAIGDDNQMCEL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNSLDFFKGL+KSKL
Subjt:  HPDGNSLDFFKGLIKSKL

SwissProt top hits

e value

%identity

Alignment

F4I4W2 Biotin--protein ligase 2

4.8e-22

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F++LEELYY+TWLHSGQRV  +EK EDQVV+NV                                             IQGLTSSGYLLAIGDDN M EL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNS DFFKGL++ KL
Subjt:  HPDGNSLDFFKGLIKSKL

Q9SL92 Biotin--protein ligase 1, chloroplastic

1.8e-21

48.31

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F++LEELYY+TWLHS QRV V++K EDQVV+NV                                             IQGLTSSGYLLA+GDDNQM EL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNS DFFKGL++ K+
Subjt:  HPDGNSLDFFKGLIKSKL

Arabidopsis top hits

e value

%identity

Alignment

AT1G37150.1 holocarboxylase synthetase 2

4.8e-09

69.23

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLI
        F++LEELYY+TWLHSGQRV  +EK EDQVV+NV  I L+
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLI

AT1G37150.2 holocarboxylase synthetase 2

3.4e-23

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F++LEELYY+TWLHSGQRV  +EK EDQVV+NV                                             IQGLTSSGYLLAIGDDN M EL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNS DFFKGL++ KL
Subjt:  HPDGNSLDFFKGLIKSKL

AT1G37150.4 holocarboxylase synthetase 2

3.4e-23

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F++LEELYY+TWLHSGQRV  +EK EDQVV+NV                                             IQGLTSSGYLLAIGDDN M EL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNS DFFKGL++ KL
Subjt:  HPDGNSLDFFKGLIKSKL

AT2G25710.1 holocarboxylase synthase 1

1.3e-22

48.31

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F++LEELYY+TWLHS QRV V++K EDQVV+NV                                             IQGLTSSGYLLA+GDDNQM EL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNS DFFKGL++ K+
Subjt:  HPDGNSLDFFKGLIKSKL

AT2G25710.2 holocarboxylase synthase 1

1.3e-22

48.31

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Query:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL
        F++LEELYY+TWLHS QRV V++K EDQVV+NV                                             IQGLTSSGYLLA+GDDNQM EL
Subjt:  FRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCEL

Query:  HPDGNSLDFFKGLIKSKL
        HPDGNS DFFKGL++ K+
Subjt:  HPDGNSLDFFKGLIKSKL

Sequences

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CDS sequence

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ATGACAAGGTTTCGGGCTCTTGAGGAACTCTACTATCAGACATGGCTGCACAGTGGACAAAGAGTTACTGTACAGGAAAAGAAAGAAGATCAAGTTGTGGAAAAT
GTACGTGATATCTTATTGATAGTTGATTCTATCGCTGCTCTATACTGTAAAGTGCTAAATGCACCGTATTCTATGATTTTCACGGTTTTAAAAACTGGAATCGAT
TGCTTATTGGTTCAGAAATTTGCTTGTTTCTTTATCCAGGGGTTGACATCTTCAGGATATTTGCTAGCTATTGGAGATGACAACCAAATGTGCGAACTTCATCCC
GATGGAAATAGTTTGGACTTTTTCAAAGGACTAATCAAGAGCAAACTGTGTAAAAACTTTGGGATGGCCCATGTCTTAAAAGGGCAGGTTTGTATGGTTTTTGGG
AGGCTGGGGGCCATGGAAGTGGAAGACCAGAGTGGACTGCGAACTCATGATAGTTCCATAGAAGCGAATGGGAATGAGAATCTTAGTGAAAAAGCAAAAAAAGTG
TACGTTGGGCGACGGAATGAATGA

mRNA sequence

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Protein sequence

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MTRFRALEELYYQTWLHSGQRVTVQEKKEDQVVENVRDILLIVDSIAALYCKVLNAPYSMIFTVLKTGIDCLLVQKFACFFIQGLTSSGYLLAIGDDNQMCELHP
DGNSLDFFKGLIKSKLCKNFGMAHVLKGQVCMVFGRLGAMEVEDQSGLRTHDSSIEANGNENLSEKAKKVYVGRRNE

CaUC11G208830 (gene) of Watermelon (USVL246-FR2) v1 genome