; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G209380 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G209380
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDNA-directed DNA polymerase
Genome locationCiama_Chr11:14822749..14823117
RNA-Seq ExpressionCaUC11G209380
SyntenyCaUC11G209380
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833156.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.1e-5692.62Show/hide
Query:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVN
        MDFEKAGEKRLLELNEMEEFRAQAYENAKLYK+RTARWHDKKIT  TFLP QR+LLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVN
Subjt:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVN

Query:  GQRLKHYIGDEERGLENLTFIA
        G RLKHYIGDEER LENL F A
Subjt:  GQRLKHYIGDEERGLENLTFIA

XP_030498073.1 uncharacterized protein LOC115713732 [Cannabis sativa]3.4e-3767.57Show/hide
Query:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVN
        M+ + AGEKRLL+LNE+EEFR +AYENAK+YKERT +WHD+ +  + F PGQ+VLLFNSRL+LFPGKL++RWSGPF +VKV P+GAVEL+G+   TFKVN
Subjt:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVN

Query:  GQRLKHYIGDE
        GQRLK Y+G +
Subjt:  GQRLKHYIGDE

XP_030502743.1 uncharacterized protein LOC115717916 [Cannabis sativa]5.9e-3768.81Show/hide
Query:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVN
        MD + AG+KRLL+L+E+EEFR +AYENAK+YKERT RWHD+ +  + F PGQ+VLLFNSRL+LFPGKL++RWSGPF +VKV P+GAVEL+G    TFKVN
Subjt:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVN

Query:  GQRLKHYIG
        GQRLK Y+G
Subjt:  GQRLKHYIG

XP_038885822.1 uncharacterized protein LOC120076116 [Benincasa hispida]5.5e-4376.92Show/hide
Query:  EKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVNGQR
        +K GEKRLLEL E+EEF  QAYENAKLYKER ARWHDKKI   TF  GQ VLLFNSRLRLFP KLRTRW GPF++VK SPHGAVE+QG +G  FKVNGQR
Subjt:  EKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVNGQR

Query:  LKHYIGDEERGLENLTF
        L+HY GDEER LENL F
Subjt:  LKHYIGDEERGLENLTF

XP_038885946.1 uncharacterized protein LOC120076251 [Benincasa hispida]6.3e-3972.07Show/hide
Query:  DFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVNG
        D + AG+ RLL+LNEMEEF+ QAYEN+K+YKERT +WHD  I  R FLPGQRVLLFNSRLRLFPGKL++RW GPF+I  V+P+ AVEL G +GTTFKVN 
Subjt:  DFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVNG

Query:  QRLKHYIGDEE
        QRLKHY GDEE
Subjt:  QRLKHYIGDEE

TrEMBL top hitse value%identityAlignment
A0A1S4DFS8 uncharacterized protein LOC1078293655.4e-3668.75Show/hide
Query:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGT-TFKV
        MD + AGEKRLL+LNE++EFR  AYENAKLYK +T RWHDK I  R F PGQ VLLFNSRL+LFPGKL++RWSGPF++V V PHGAVEL+  + T TF V
Subjt:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGT-TFKV

Query:  NGQRLKHYIGDE
        NGQR+KHY G +
Subjt:  NGQRLKHYIGDE

A0A2G9H400 Reverse transcriptase3.1e-3670.64Show/hide
Query:  DFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNG-TTFKVN
        D + AGEKRLL+LNE++EFR QAYENAK+YKE+T RWHDKKI  R F PGQ VLLFNSRL+LFPGKL++RWSGPF I +V PHGAVEL+  N    FKVN
Subjt:  DFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNG-TTFKVN

Query:  GQRLKHYIG
         QR+KHY G
Subjt:  GQRLKHYIG

A0A2G9HBV9 DNA-directed DNA polymerase2.7e-3568.81Show/hide
Query:  DFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNG-TTFKVN
        D + AGEKRLL+LNE++EFR QAYENAK+YKE+T RWHDKKI  R F PGQ VLLFNSRL+LFPGKL++RWSGPF + +V  HGAVEL+  N    FKVN
Subjt:  DFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNG-TTFKVN

Query:  GQRLKHYIG
         QR+KHY G
Subjt:  GQRLKHYIG

A0A6P4D1N6 uncharacterized protein LOC1074845092.4e-3666.96Show/hide
Query:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGN-NGTTFKV
        +D + AGEKRLL+LNE+EEFR +AYENA++YKER  RWHDK+I+ RTF PGQRVLLFNSRL++FPGKLR+RW+GP+ I+KVSPHG VEL    +  TF  
Subjt:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGN-NGTTFKV

Query:  NGQRLKHYIGDE
        NG R+KHY G E
Subjt:  NGQRLKHYIGDE

A0A6P5N8U2 uncharacterized protein LOC1102785871.6e-3561.79Show/hide
Query:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGN-NGTTFKV
        +D + AGEKRLL+LNE+EEFR +AY+NAK+YKER  RWHDK+I+ RTF PGQ+VLLFNSRL++FPGKLR+RW+GP+ I KVSPHG VEL    +  TF  
Subjt:  MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGN-NGTTFKV

Query:  NGQRLKHYIG---DEERGLENLT
        NG R+KHY G    +E  ++ LT
Subjt:  NGQRLKHYIG---DEERGLENLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGAGAAAGCCGGTGAGAAACGCCTCTTAGAACTCAATGAGATGGAGGAGTTCCGTGCTCAAGCTTATGAGAATGCCAAACTTTACAAAGAGCGCACTGCGAG
ATGGCATGACAAGAAGATCACCTCACGAACCTTCCTTCCAGGACAAAGAGTATTACTTTTTAACTCACGTTTACGCTTGTTTCCAGGAAAGCTTAGGACACGATGGTCGG
GACCCTTTATCATTGTCAAGGTATCCCCACACGGAGCCGTGGAACTACAAGGTAACAATGGAACAACCTTCAAAGTGAATGGTCAACGATTAAAGCACTACATCGGTGAT
GAAGAACGCGGACTTGAGAACCTGACTTTCATTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGAGAAAGCCGGTGAGAAACGCCTCTTAGAACTCAATGAGATGGAGGAGTTCCGTGCTCAAGCTTATGAGAATGCCAAACTTTACAAAGAGCGCACTGCGAG
ATGGCATGACAAGAAGATCACCTCACGAACCTTCCTTCCAGGACAAAGAGTATTACTTTTTAACTCACGTTTACGCTTGTTTCCAGGAAAGCTTAGGACACGATGGTCGG
GACCCTTTATCATTGTCAAGGTATCCCCACACGGAGCCGTGGAACTACAAGGTAACAATGGAACAACCTTCAAAGTGAATGGTCAACGATTAAAGCACTACATCGGTGAT
GAAGAACGCGGACTTGAGAACCTGACTTTCATTGCATGA
Protein sequenceShow/hide protein sequence
MDFEKAGEKRLLELNEMEEFRAQAYENAKLYKERTARWHDKKITSRTFLPGQRVLLFNSRLRLFPGKLRTRWSGPFIIVKVSPHGAVELQGNNGTTFKVNGQRLKHYIGD
EERGLENLTFIA