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CaUC11G209890 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G209890
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionFerredoxin--NADP reductase, chloroplastic
Genome locationCiama_Chr11:19789394..19802535
RNA-Seq ExpressionCaUC11G209890
SyntenyCaUC11G209890
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR015701 - Ferredoxin--NADP reductase
IPR017938 - Riboflavin synthase-like beta-barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2310775.1 hypothetical protein GH714_017067 [Hevea brasiliensis]6.3e-4163.45Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVI-----PLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNV
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYGVI     P +S   L    +  L F+ D      L++       +GEN KKP +P NV
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVI-----PLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNV

Query:  CFYSIASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
          YSIASTRY D+FDGKTA+LCV RA+YYDP+TGK+DPSK+GICS
Subjt:  CFYSIASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

RZR73137.1 hypothetical protein BHM03_00020788 [Ensete ventricosum]1.1e-4063.83Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVL-GENLKKPKSPRNVCFYS
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYG+IP                                 P +L GEN KKP SP NV  YS
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVL-GENLKKPKSPRNVCFYS

Query:  IASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        IASTRY DSFDGKTASLCV RA+YY+P+TGK+DPSKNGICS
Subjt:  IASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

XP_008439552.1 PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic [Cucumis melo]1.4e-4064.29Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYGVIP                                     GEN KKP SP NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RA+YYDP+TGK+DPSKNGICS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

XP_017978649.1 PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic [Theobroma cacao]1.8e-4063.57Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYGVIP                                     GEN KKP SP NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

XP_038970521.1 ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Phoenix dactylifera]2.4e-4062.86Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYG+IP                                     GEN KKP SP NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

TrEMBL top hitse value%identityAlignment
A0A1S3AZN4 Ferredoxin--NADP reductase, chloroplastic6.8e-4164.29Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYGVIP                                     GEN KKP SP NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RA+YYDP+TGK+DPSKNGICS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

A0A1S3VK56 Ferredoxin--NADP reductase, chloroplastic2.0e-4062.86Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYGVIP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

A0A3Q0FIA0 Ferredoxin--NADP reductase, chloroplastic2.0e-4062.86Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYGVIP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

A0A445MFS2 Ferredoxin--NADP reductase, chloroplastic5.2e-4163.83Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVL-GENLKKPKSPRNVCFYS
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYG+IP                                 P +L GEN KKP SP NV  YS
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVL-GENLKKPKSPRNVCFYS

Query:  IASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        IASTRY DSFDGKTASLCV RA+YY+P+TGK+DPSKNGICS
Subjt:  IASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

A0A6A6ME53 Uncharacterized protein3.0e-4163.45Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVI-----PLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNV
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYGVI     P +S   L    +  L F+ D      L++       +GEN KKP +P NV
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVI-----PLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNV

Query:  CFYSIASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
          YSIASTRY D+FDGKTA+LCV RA+YYDP+TGK+DPSK+GICS
Subjt:  CFYSIASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

SwissProt top hitse value%identityAlignment
O04397 Ferredoxin--NADP reductase, root-type isozyme, chloroplastic3.8e-4160.71Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVIDH  N+PYWEGQSYGVIP                                     GEN KKP +P NV  Y I
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

O23877 Ferredoxin--NADP reductase, embryo isozyme, chloroplastic1.0e-4162.14Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVIDHG NVPYWEGQSYGVIP                                     GEN KKP SP  V  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RA+YYDP+TGK+DP+K GICS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

P41345 Ferredoxin--NADP reductase, root isozyme, chloroplastic7.7e-4260Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVER+VGPKAP ETCHIVIDHG NVPYWEGQSYG+IP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDG+T SLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

Q41014 Ferredoxin--NADP reductase, root isozyme, chloroplastic2.9e-4161.43Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVERLVGPKAP ETCHIVI+H  NVPYWEGQSYGVIP                                     GEN KKP SP NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY D+FDGKTASLCV RA+YYDP TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

Q9M0V6 Ferredoxin--NADP reductase, root isozyme 1, chloroplastic1.1e-4060.71Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVER+VGP+AP ETCHIVIDH  NVPYWEGQSYGVIP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RAIYYDP+TGK+DPSK G+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

Arabidopsis top hitse value%identityAlignment
AT1G30510.1 root FNR 22.5e-4058.57Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        + YTA IVSVER+VGPKAP ETCHIVIDH  N+PYWEGQSYGVIP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY D FDGKTASLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

AT1G30510.2 root FNR 22.5e-4058.57Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        + YTA IVSVER+VGPKAP ETCHIVIDH  N+PYWEGQSYGVIP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY D FDGKTASLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

AT1G30510.3 root FNR 22.5e-4058.57Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        + YTA IVSVER+VGPKAP ETCHIVIDH  N+PYWEGQSYGVIP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY D FDGKTASLCV RA+YYDP+TGK+DPSKNG+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

AT4G05390.1 root FNR 17.9e-4260.71Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVER+VGP+AP ETCHIVIDH  NVPYWEGQSYGVIP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RAIYYDP+TGK+DPSK G+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS

AT4G05390.2 root FNR 17.9e-4260.71Show/hide
Query:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI
        +PYTATIVSVER+VGP+AP ETCHIVIDH  NVPYWEGQSYGVIP                                     GEN KKP +P NV  YSI
Subjt:  QPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSI

Query:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS
        ASTRY DSFDGKTASLCV RAIYYDP+TGK+DPSK G+CS
Subjt:  ASTRYEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCTTACACCGCAACTATTGTTTCGGTTGAAAGACTTGTTGGACCAAAAGCACCGAGAGAGACTTGTCATATTGTAATCGATCATGGCAGTAACGTTCCC
TATTGGGAAGGTCAGAGCTATGGTGTTATTCCTCTAGTAAGTCACTCATGCCTCGGTGATTCCCCTATTACTGCATTGAGTTTTGATATAGATGCTCATGCTAAG
ATTTTTCTCAGTCGTGCATTTTATAAGCCTTTTGTATTGGGTGAAAACCTGAAGAAACCTAAGAGTCCACGCAATGTTTGTTTCTACTCAATTGCGTCAACTAGG
TATGAAGATTCTTTTGATGGCAAGACTGCTAGTTTATGTGTTCCCCGTGCCATTTATTATGACCCTAAAACTGGAAAGGATGATCCTTCAAAGAACGGAATATGC
AGCAAAGAACGGAATATGTTGAAGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAACCTTACACCGCAACTATTGTTTCGGTTGAAAGACTTGTTGGACCAAAAGCACCGAGAGAGACTTGTCATATTGTAATCGATCATGGCAGTAACGTTCCC
TATTGGGAAGGTCAGAGCTATGGTGTTATTCCTCTAGTAAGTCACTCATGCCTCGGTGATTCCCCTATTACTGCATTGAGTTTTGATATAGATGCTCATGCTAAG
ATTTTTCTCAGTCGTGCATTTTATAAGCCTTTTGTATTGGGTGAAAACCTGAAGAAACCTAAGAGTCCACGCAATGTTTGTTTCTACTCAATTGCGTCAACTAGG
TATGAAGATTCTTTTGATGGCAAGACTGCTAGTTTATGTGTTCCCCGTGCCATTTATTATGACCCTAAAACTGGAAAGGATGATCCTTCAAAGAACGGAATATGC
AGCAAAGAACGGAATATGTTGAAGTTCTAA
Protein sequenceShow/hide protein sequence
MQPYTATIVSVERLVGPKAPRETCHIVIDHGSNVPYWEGQSYGVIPLVSHSCLGDSPITALSFDIDAHAKIFLSRAFYKPFVLGENLKKPKSPRNVCFYSIASTR
YEDSFDGKTASLCVPRAIYYDPKTGKDDPSKNGICSKERNMLKF