CuGenDBv2

Gene ID	CaUC11G210110
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	Ciama_Chr11:20568538..20572107
RNA-Seq Expression	CaUC11G210110
Synteny	CaUC11G210110
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AEX96019.1 photosystem I P700 apoprotein A1 [Allium fistulosum]

3.0e-17

69.88

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Query:  FLAVTAFIGLSNAGKSLSA-------EKRGRHRQELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF
        FL   A   + + G SLSA         RG + QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLGGIATTWA F
Subjt:  FLAVTAFIGLSNAGKSLSA-------EKRGRHRQELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF

KAA8532476.1 hypothetical protein F0562_032509 [Nyssa sinensis]

1.8e-17

49.18

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRHRQELIESIVWAHNKLKVAPAT---------Q
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGV HYLLGGIATTWA+    + C +            Q   ES  W  + L V P           Q
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRHRQELIESIVWAHNKLKVAPAT---------Q

Query:  PGALSIVQGRAVGVTHYLLGGI
        P   +  +G A+G  +    G+
Subjt:  PGALSIVQGRAVGVTHYLLGGI

PHT53142.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum]

8.0e-18

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF-PLSHPCRYY
        QELIESIVWAHNKLKVAPATQP ALSI+QGRAVGVTHYLLGGIATTWA F   SH C  Y
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF-PLSHPCRYY

PHT94092.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum annuum]

1.4e-17

53.91

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRHRQELIESIVWAHNKLKVAPATQPGALSIVQG
        QELIESIVWAHNKLKVAPAT P ALSI+QG                W                                AHNKLKVAPATQP ALSI+QG
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRHRQELIESIVWAHNKLKVAPATQPGALSIVQG

Query:  RAVGVTHYLLGGIAT
        RAVGVTHYLLGGIAT
Subjt:  RAVGVTHYLLGGIAT

RZC64928.1 hypothetical protein C5167_008618 [Papaver somniferum]

4.7e-34

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGR-HRQELIESIVWAHNKLKVAPATQPGALSIVQ
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLG         P +H    +++     GR + QELIESIVWAHNKLKVAPATQP ALSIVQ
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGR-HRQELIESIVWAHNKLKVAPATQPGALSIVQ

Query:  GRAVGVTHYLLGGIAT
        GRAVGVTHYLLGG AT
Subjt:  GRAVGVTHYLLGGIAT

TrEMBL top hits

e value

%identity

Alignment

A0A251SR83 Putative photosystem I PsaA/PsaB

3.0e-18

72.15

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Query:  FLAVTAFIGLSNAGKSLSAEK---RGRHRQELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF
        FL   A   + + G SLSA      G + QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLGGIATTWA F
Subjt:  FLAVTAFIGLSNAGKSLSAEK---RGRHRQELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF

A0A2G2X6K2 Photosystem I P700 chlorophyll a apoprotein A1

3.9e-18

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF-PLSHPCRYY
        QELIESIVWAHNKLKVAPATQP ALSI+QGRAVGVTHYLLGGIATTWA F   SH C  Y
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF-PLSHPCRYY

A0A2G3AIN7 Photosystem I chlorophyll a apoprotein A1

6.6e-18

53.91

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRHRQELIESIVWAHNKLKVAPATQPGALSIVQG
        QELIESIVWAHNKLKVAPAT P ALSI+QG                W                                AHNKLKVAPATQP ALSI+QG
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRHRQELIESIVWAHNKLKVAPATQPGALSIVQG

Query:  RAVGVTHYLLGGIAT
        RAVGVTHYLLGGIAT
Subjt:  RAVGVTHYLLGGIAT

A0A4Y7JYS7 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-34

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGR-HRQELIESIVWAHNKLKVAPATQPGALSIVQ
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLG         P +H    +++     GR + QELIESIVWAHNKLKVAPATQP ALSIVQ
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGR-HRQELIESIVWAHNKLKVAPATQPGALSIVQ

Query:  GRAVGVTHYLLGGIAT
        GRAVGVTHYLLGG AT
Subjt:  GRAVGVTHYLLGGIAT

A0A5J5ARL4 Photosystem I P700 chlorophyll a apoprotein A1

8.6e-18

49.18

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRHRQELIESIVWAHNKLKVAPAT---------Q
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGV HYLLGGIATTWA+    + C +            Q   ES  W  + L V P           Q
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRHRQELIESIVWAHNKLKVAPAT---------Q

Query:  PGALSIVQGRAVGVTHYLLGGI
        P   +  +G A+G  +    G+
Subjt:  PGALSIVQGRAVGVTHYLLGGI

SwissProt top hits

e value

%identity

Alignment

A4QJB5 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-20

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLGGIATTWA F
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF

A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-20

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLGGIATTWA F
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF

A4QK18 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-20

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLGGIATTWA F
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF

Q3V534 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-20

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLGGIATTWA F
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF

Q70Y03 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-20

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF
        QELIESIVWAHNKLKVAPATQP ALSIVQGRAVGVTHYLLGGIATTWA F
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

2.4e-04

46.15

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Query:  QELIESIVWAHNKLKVAP----ATQPGALSIVQGRAVGVTHYLLGGIATRRA
        QELIE++ WAH +  +A       +P ALSIVQ R VG+ H+ +G I T  A
Subjt:  QELIESIVWAHNKLKVAP----ATQPGALSIVQGRAVGVTHYLLGGIATRRA

ATCG00350.1 Photosystem I, PsaA/PsaB protein

8.2e-21

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Query:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF
        QELIESIVWAHNKLKVAPATQP ALSI+QGRAVGVTHYLLGGIATTWA F
Subjt:  QELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVF

Sequences

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CDS sequence

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ATGCCTCATATTCGAGTGTACTTCACAAGGTTTCTTGCAGTCACAGCATTTATTGGATTATCTAATGCTGGAAAGAGCTTATCTGCGGAAAAAAGAGGACGTCAT
CGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCCACTCAGCCTGGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGA
GTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCNGTCTTTCCCCTCTCTCATCCCTGCCGCTATTATACAATCACTGCGGAAAAAAGAGGACGTCAT
CGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCCACTCAGCCTGGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGA
GTAACCCATTACCTTCTGGGTGGAATTGCCACAAGAAGGGCTTCTGATTCTATCAAGCCGTCTGAGGAGAACTCTGTAAGGCAGTCCACTAGAATGAGTAAAGAG
AAAGGAGGAGAGACAGTCTCCTTGCATAATACATCTGCAAGCTTGAATTTTGGCTCCAAGCTTACCATTTACGAGATCCACGTAATTGGAAATAGAACATGA

mRNA sequence

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Protein sequence

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MPHIRVYFTRFLAVTAFIGLSNAGKSLSAEKRGRHRQELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATTWAVFPLSHPCRYYTITAEKRGRH
RQELIESIVWAHNKLKVAPATQPGALSIVQGRAVGVTHYLLGGIATRRASDSIKPSEENSVRQSTRMSKEKGGETVSLHNTSASLNFGSKLTIYEIHVIGNRT

CaUC11G210110 (gene) of Watermelon (USVL246-FR2) v1 genome