; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G210510 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G210510
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCCHC-type domain-containing protein
Genome locationCiama_Chr11:22064248..22064601
RNA-Seq ExpressionCaUC11G210510
SyntenyCaUC11G210510
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044949.1 hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa]1.4e-3273.74Show/hide
Query:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP
        VINLTNN+LTDYLSF+D+ A VLE++N+CKN ++KLVSSQQA+AL VTR    EC S+GS+NQGRSKS+SKK MKCYNCGKKGH+KK+CW+LNKKD NP
Subjt:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP

KAF2314531.1 hypothetical protein GH714_027382 [Hevea brasiliensis]3.2e-2462.77Show/hide
Query:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNK
        +INLTNN+LTDYL FND+ AAVLE++++ KN ++KL +SQQ +AL++ R    E GS+GSQN  RSKSRSKKN KCY+CGK+GH+KKDCW+  K
Subjt:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNK

TYK06685.1 Gag-Pol [Cucumis melo var. makuwa]9.3e-2456.41Show/hide
Query:  MLNFYFKVFLTCLINFVINLTNNVLTDYLS--FNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKK
        M N +  +    L +     T   + D+L+  FND+VAAVLE++N+ KN ++KLVSSQQA+AL VT+    EC S+G +NQGRSKS+SKKN+KCYNCGKK
Subjt:  MLNFYFKVFLTCLINFVINLTNNVLTDYLS--FNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKK

Query:  GHLKKDCWNLNKKDSNP
        GHLK +CWN+NKKD NP
Subjt:  GHLKKDCWNLNKKDSNP

TYK16527.1 hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa]1.5e-3476.77Show/hide
Query:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP
        VINLTNN+LTDYLSF+D+VA VLE++N+CKN ++KLVSSQQA+ L VTR    EC S+GS+NQGRSKS+SKKNMKCYNCGKKGH+KK+CWNLNKKDSNP
Subjt:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP

TYK21892.1 polyprotein [Cucumis melo var. makuwa]2.7e-2358.12Show/hide
Query:  LINFVINLTNNVLT------------DYLS--FNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKK
        + N  + L +NVL+            D+L+  F+D+VAAVLE++N+ KN ++KLVSSQQA+AL+V +    +  S+GS+NQGRSKSRSKKNMKCYNCGKK
Subjt:  LINFVINLTNNVLT------------DYLS--FNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKK

Query:  GHLKKDCWNLNKKDSNP
        GHLKK+CWNLNKK SNP
Subjt:  GHLKKDCWNLNKKDSNP

TrEMBL top hitse value%identityAlignment
A0A5A7TUN0 Uncharacterized protein6.9e-3373.74Show/hide
Query:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP
        VINLTNN+LTDYLSF+D+ A VLE++N+CKN ++KLVSSQQA+AL VTR    EC S+GS+NQGRSKS+SKK MKCYNCGKKGH+KK+CW+LNKKD NP
Subjt:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP

A0A5D3C5M6 Gag-Pol4.5e-2456.41Show/hide
Query:  MLNFYFKVFLTCLINFVINLTNNVLTDYLS--FNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKK
        M N +  +    L +     T   + D+L+  FND+VAAVLE++N+ KN ++KLVSSQQA+AL VT+    EC S+G +NQGRSKS+SKKN+KCYNCGKK
Subjt:  MLNFYFKVFLTCLINFVINLTNNVLTDYLS--FNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKK

Query:  GHLKKDCWNLNKKDSNP
        GHLK +CWN+NKKD NP
Subjt:  GHLKKDCWNLNKKDSNP

A0A5D3CXA6 Uncharacterized protein7.4e-3576.77Show/hide
Query:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP
        VINLTNN+LTDYLSF+D+VA VLE++N+CKN ++KLVSSQQA+ L VTR    EC S+GS+NQGRSKS+SKKNMKCYNCGKKGH+KK+CWNLNKKDSNP
Subjt:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNKKDSNP

A0A5D3DE66 Polyprotein1.3e-2358.12Show/hide
Query:  LINFVINLTNNVLT------------DYLS--FNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKK
        + N  + L +NVL+            D+L+  F+D+VAAVLE++N+ KN ++KLVSSQQA+AL+V +    +  S+GS+NQGRSKSRSKKNMKCYNCGKK
Subjt:  LINFVINLTNNVLT------------DYLS--FNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKK

Query:  GHLKKDCWNLNKKDSNP
        GHLKK+CWNLNKK SNP
Subjt:  GHLKKDCWNLNKKDSNP

A0A6A6MLA0 CCHC-type domain-containing protein1.6e-2462.77Show/hide
Query:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNK
        +INLTNN+LTDYL FND+ AAVLE++++ KN ++KL +SQQ +AL++ R    E GS+GSQN  RSKSRSKKN KCY+CGK+GH+KKDCW+  K
Subjt:  VINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNLNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGCTAAACTTCTACTTCAAAGTCTTCCTGACTTGTTTGATCAACTTTGTCATCAATCTAACAAATAATGTTCTCACCGACTACCTAAGCTTTAATGATATTGT
AGCTGCTGTTCTAGAAGATAAAAATCAATGCAAGAACAACAAAGAAAAGTTGGTAAGTTCACAACAAGCAAAAGCATTGATGGTGACAAGAAGCATGTTAGCGGAGTGTG
GCTCAACTGGGAGCCAAAATCAAGGAAGGTCAAAATCAAGAAGTAAGAAGAACATGAAGTGCTACAATTGTGGAAAGAAGGGACATCTAAAGAAGGATTGTTGGAATCTA
AACAAGAAAGATTCCAATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACATGCTAAACTTCTACTTCAAAGTCTTCCTGACTTGTTTGATCAACTTTGTCATCAATCTAACAAATAATGTTCTCACCGACTACCTAAGCTTTAATGATATTGT
AGCTGCTGTTCTAGAAGATAAAAATCAATGCAAGAACAACAAAGAAAAGTTGGTAAGTTCACAACAAGCAAAAGCATTGATGGTGACAAGAAGCATGTTAGCGGAGTGTG
GCTCAACTGGGAGCCAAAATCAAGGAAGGTCAAAATCAAGAAGTAAGAAGAACATGAAGTGCTACAATTGTGGAAAGAAGGGACATCTAAAGAAGGATTGTTGGAATCTA
AACAAGAAAGATTCCAATCCTTAG
Protein sequenceShow/hide protein sequence
MNMLNFYFKVFLTCLINFVINLTNNVLTDYLSFNDIVAAVLEDKNQCKNNKEKLVSSQQAKALMVTRSMLAECGSTGSQNQGRSKSRSKKNMKCYNCGKKGHLKKDCWNL
NKKDSNP