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CaUC11G210930 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G210930
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationCiama_Chr11:23144732..23145085
RNA-Seq ExpressionCaUC11G210930
SyntenyCaUC11G210930
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148136.1 uncharacterized protein LOC111016889 [Momordica charantia]1.6e-2050.46Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+ + +TC C EFDY  IPC+HA+AG  + NI+PY LC   YT  S ++  YAEPIF + H+S WK++P FVD  V  P +V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+R+T
Subjt:  PSAGEIRKT

XP_022152406.1 uncharacterized protein LOC111020142 [Momordica charantia]1.8e-1948.62Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+ + + C C +FDY  IPC+HA+AG  + NI+PYTLC  VYT  S ++  YAEPIF + H+S W ++P FVD  V  P +V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+ +T
Subjt:  PSAGEIRKT

XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]1.8e-1949.54Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+ + +TC C EFDY  IPC+HA+A   + NI+PYTLC   YT  S ++  YAEPIF + H+S W ++P FVD  V  P +V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+R+T
Subjt:  PSAGEIRKT

XP_022158663.1 uncharacterized protein LOC111025125 [Momordica charantia]1.8e-1949.54Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+ + +TC C EFDY  I C+HA+ G  + NI+PYTLC   YT  S ++  YAEPIF + H+S WK++P FVD  V  P +V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+R+T
Subjt:  PSAGEIRKT

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]1.4e-1950.46Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+L+   C C EFDY  IPC+HA+A   + NI+PY+LC   YT  S +L  YAEPIF + HIS W ++P+FV+  V  PK V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+R+T
Subjt:  PSAGEIRKT

TrEMBL top hitse value%identityAlignment
A0A6J1D4G8 uncharacterized protein LOC1110168898.0e-2150.46Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+ + +TC C EFDY  IPC+HA+AG  + NI+PY LC   YT  S ++  YAEPIF + H+S WK++P FVD  V  P +V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+R+T
Subjt:  PSAGEIRKT

A0A6J1DHM2 uncharacterized protein LOC1110201428.8e-2048.62Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+ + + C C +FDY  IPC+HA+AG  + NI+PYTLC  VYT  S ++  YAEPIF + H+S W ++P FVD  V  P +V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+ +T
Subjt:  PSAGEIRKT

A0A6J1DJT1 uncharacterized protein LOC1110207158.8e-2049.54Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+ + +TC C EFDY  IPC+HA+A   + NI+PYTLC   YT  S ++  YAEPIF + H+S W ++P FVD  V  P +V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+R+T
Subjt:  PSAGEIRKT

A0A6J1DWR5 uncharacterized protein LOC1110251258.8e-2049.54Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+ + +TC C EFDY  I C+HA+ G  + NI+PYTLC   YT  S ++  YAEPIF + H+S WK++P FVD  V  P +V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+R+T
Subjt:  PSAGEIRKT

A0A6J1DYC4 uncharacterized protein LOC1110256786.7e-2050.46Show/hide
Query:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI
        DG+ +  V+L+   C C EFDY  IPC+HA+A   + NI+PY+LC   YT  S +L  YAEPIF + HIS W ++P+FV+  V  PK V  V RR  VRI
Subjt:  DGHCNPRVNLHVKTCMCGEFDY-NIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRI

Query:  PSAGEIRKT
        PS GE+R+T
Subjt:  PSAGEIRKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTCACTGTAACCCCCGTGTAAATTTGCATGTGAAGACATGCATGTGTGGAGAATTTGATTACAACATCCCTTGTGCACATGCACTCGCCGGTTGTCGGGTAAG
TAATATTGATCCCTATACTCTATGCTTTAGTGTGTATACTGTTTTATCATTGTTATTAACAAGGTATGCAGAGCCTATATTCACTCTATGTCATATATCAGAGTGGAAAA
CAACACCGAAGTTCGTAGACAGAGTTGTCCTACATCCTAAGGTTGTTGGAATAGTCAGCCGTCGACCCATTGTTCGAATTCCATCAGCAGGTGAAATACGAAAAACAGAT
TTGCAAATGTCATCGGTATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTCACTGTAACCCCCGTGTAAATTTGCATGTGAAGACATGCATGTGTGGAGAATTTGATTACAACATCCCTTGTGCACATGCACTCGCCGGTTGTCGGGTAAG
TAATATTGATCCCTATACTCTATGCTTTAGTGTGTATACTGTTTTATCATTGTTATTAACAAGGTATGCAGAGCCTATATTCACTCTATGTCATATATCAGAGTGGAAAA
CAACACCGAAGTTCGTAGACAGAGTTGTCCTACATCCTAAGGTTGTTGGAATAGTCAGCCGTCGACCCATTGTTCGAATTCCATCAGCAGGTGAAATACGAAAAACAGAT
TTGCAAATGTCATCGGTATGGTAA
Protein sequenceShow/hide protein sequence
MDGHCNPRVNLHVKTCMCGEFDYNIPCAHALAGCRVSNIDPYTLCFSVYTVLSLLLTRYAEPIFTLCHISEWKTTPKFVDRVVLHPKVVGIVSRRPIVRIPSAGEIRKTD
LQMSSVW