; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G210950 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G210950
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUPF0400 protein C337.03-like
Genome locationCiama_Chr11:23164317..23175010
RNA-Seq ExpressionCaUC11G210950
SyntenyCaUC11G210950
Gene Ontology termsGO:0031124 - mRNA 3'-end processing (biological process)
GO:0016591 - RNA polymerase II, holoenzyme (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
InterPro domainsIPR006569 - CID domain
IPR008942 - ENTH/VHS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138638.1 UPF0400 protein C337.03 [Cucumis sativus]3.2e-13893.01Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEF
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKCRNSISYLEKLDKEIG DVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRGSSIADDLRGHH+ILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQ   S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

XP_008441251.1 PREDICTED: UPF0400 protein C337.03 isoform X1 [Cucumis melo]2.2e-13993.75Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEF
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKCRNSISYLEKLDKEIGADVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQ   S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

XP_023549864.1 UPF0400 protein C337.03-like isoform X1 [Cucurbita pepo subsp. pepo]1.4e-13390.44Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVI  GD+F
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGK +ETGNRNGK FSSKLKQS S+SLDKIVSGYQVVY +E+DEDAVLSKCRNSISYLEKLDKEIGADVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRGSS A+DLRGHH+ILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV  S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

XP_023549865.1 UPF0400 protein C337.03-like isoform X2 [Cucurbita pepo subsp. pepo]1.4e-13390.44Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVI  GD+F
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGK +ETGNRNGK FSSKLKQS S+SLDKIVSGYQVVY +E+DEDAVLSKCRNSISYLEKLDKEIGADVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRGSS A+DLRGHH+ILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV  S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

XP_038884747.1 UPF0400 protein C337.03 [Benincasa hispida]6.5e-13993.38Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEF
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKH+ETG+RNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIG DVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRGSSIADDLRGHHTILRDCIEQLT+IETSRASLVSHLREALQEQEFKLEQVRNQLQ   S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

TrEMBL top hitse value%identityAlignment
A0A0A0LMU3 CID domain-containing protein1.6e-13893.01Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEF
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKCRNSISYLEKLDKEIG DVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRGSSIADDLRGHH+ILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQ   S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

A0A1S3B3N2 UPF0400 protein C337.03 isoform X11.1e-13993.75Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEF
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKCRNSISYLEKLDKEIGADVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQ   S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

A0A1S3B3S0 UPF0400 protein C337.03 isoform X22.6e-13390.44Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEF
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKCRNSISYLEKLDKEIGADVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
                        DDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQ   S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

A0A6J1FFD5 UPF0400 protein C337.03-like1.3e-13289.71Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVI  GD+F
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGK +ETGNRNGK FSSKLKQS S+SLDKIV GYQVVY +E+DEDAVLSKCRNSISYLEKLDKEIGADVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRG+S A+DLRGHH ILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV  S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

A0A6J1JZ86 UPF0400 protein C337.03-like isoform X11.7e-13290.07Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCS REQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRDVI  GD+F
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS
        GRNAALRLIGIWEERKVFGSRGQSLKEEIMGK  ETGNRNGK FSSKLKQS S+SLDKIVSGYQVVY +E+DEDAVLSKCRNSISYLEKLDKEIGADVNS
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNS

Query:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS
               GQYRGSS A+DLRGHH ILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV  S S
Subjt:  GIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSAS

SwissProt top hitse value%identityAlignment
Q0P5J9 Regulation of nuclear pre-mRNA domain-containing protein 1A1.5e-2127.66Show/hide
Query:  FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNA
        F+   L +KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   ++L +LYLAND++QNS+RKG EF  +F  V+  A + V    DE  +  
Subjt:  FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNA

Query:  ALRLIGIWEERKVFGSRG-QSLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNS-------ISY
          R++ IWEER V+ +   + LK+ + G                N N     S  +   ++ L + +   +    N    DA + +   S       +S 
Subjt:  ALRLIGIWEERKVFGSRG-QSLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNS-------ISY

Query:  LEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL
        L+K+ DKE G  ++  +    +L+  Y G   A+            I+    +    A  +   +EAL E+E KLE+ + +L
Subjt:  LEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL

Q5R8Y3 Regulation of nuclear pre-mRNA domain-containing protein 1A1.5e-2127.66Show/hide
Query:  FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNA
        F+   L +KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   ++L +LYLAND++QNS+RKG EF  +F  V+  A + V    DE  +  
Subjt:  FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNA

Query:  ALRLIGIWEERKVFGSRG-QSLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNS-------ISY
          R++ IWEER V+ +   + LK+ + G                N N     S  +   ++ L + +   +    N    DA + +   S       +S 
Subjt:  ALRLIGIWEERKVFGSRG-QSLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNS-------ISY

Query:  LEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL
        L+K+ DKE G  ++  +    +L+  Y G   A+            I+    +    A  +   +EAL E+E KLE+ + +L
Subjt:  LEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL

Q96P16 Regulation of nuclear pre-mRNA domain-containing protein 1A1.5e-2127.66Show/hide
Query:  FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNA
        F+   L +KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   ++L +LYLAND++QNS+RKG EF  +F  V+  A + V    DE  +  
Subjt:  FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNA

Query:  ALRLIGIWEERKVFGSRG-QSLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNS-------ISY
          R++ IWEER V+ +   + LK+ + G                N N     S  +   ++ L + +   +    N    DA + +   S       +S 
Subjt:  ALRLIGIWEERKVFGSRG-QSLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNS-------ISY

Query:  LEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL
        L+K+ DKE G  ++  +    +L+  Y G   A+            I+    +    A  +   +EAL E+E KLE+ + +L
Subjt:  LEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL

Q9CSU0 Regulation of nuclear pre-mRNA domain-containing protein 1B1.2e-2142.24Show/hide
Query:  TFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRN
        +F+   L +KL+ L+NSQ S++TLS W I H   A  +V  W ++   +   ++L +LYLAND++QNS+RKG EF  EF  VL  A   V    DE  + 
Subjt:  TFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRN

Query:  AALRLIGIWEERKVFG
           RL+ IW+ER V+G
Subjt:  AALRLIGIWEERKVFG

Q9NQG5 Regulation of nuclear pre-mRNA domain-containing protein 1B1.2e-2142.24Show/hide
Query:  TFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRN
        +F+   L +KL+ L+NSQ S++TLS W I H   A  +V  W ++   +   ++L +LYLAND++QNS+RKG EF  EF  VL  A   V    DE  + 
Subjt:  TFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRN

Query:  AALRLIGIWEERKVFG
           RL+ IW+ER V+G
Subjt:  AALRLIGIWEERKVFG

Arabidopsis top hitse value%identityAlignment
AT3G26990.1 ENTH/VHS family protein2.0e-9865.68Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        MG +FN QILVEKLA+LNNSQASIETLSHWCIFHMNKAK VVETW +QFHC+PREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLP ALRD+I +GD+F
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKL----KQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGA
        GR +A RL+ IWEERKVFGSRGQ LKEE++G+  E G RNG     KL    +Q    +L+K+VS  +V++G +IDEDA++ K  N+  YLEK  +E+  
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKL----KQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGA

Query:  DVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV
        D++S       G   G ++  +L+G H ILRDCIEQL  +ETSR SL+SHLREALQEQE KLEQVRN LQ+
Subjt:  DVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV

AT5G10060.1 ENTH/VHS family protein9.6e-6443.77Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        M   F+ QIL++KLA+LN+SQ SIETLSHWCIF+ +KA+ +V TW+KQFH +  +Q++  LYLANDILQNS+R+G+EFV EFW VLP AL+D++  GD+ 
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHM--------------ETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISY
        G++A  R+I IWEER+VFGSR +SLK+ ++G+ +              ++  R  K   +KL  S  V+ +KI S Y +V     +E+A ++KC++++  
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHM--------------ETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISY

Query:  LEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV
        + K++K    DV     T      R  S+A +L     +LR CIE+L +++ SR+SLV+ L++AL+EQE +L+ ++ Q+QV
Subjt:  LEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV

AT5G65180.1 ENTH/VHS family protein1.3e-6043.37Show/hide
Query:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF
        M   F+ +IL++ LA+LN++Q SI+TLS WCI H ++A+ VV TW+KQFH +   Q++  LYLANDILQNS+R+G+EFV EFWKVLP AL+D++  GD++
Subjt:  MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEF

Query:  GRNAALRLIGIWEERKVFGSRGQSLKEEIM----------GKHMETGNRNGK--PFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLE
        G+    RL+ IWEER+VFGSR +SLK+ ++           K    G+++ K    S+K K S+    +KIVS + +V     +E+  ++KC++++  + 
Subjt:  GRNAALRLIGIWEERKVFGSRGQSLKEEIM----------GKHMETGNRNGK--PFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLE

Query:  KLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV
        K++K    DV     T      R  S+A +L     ILR  +E+L ++E SR SLV+HLREAL+EQE +LE +++Q+QV
Subjt:  KLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV

AT5G65180.2 ENTH/VHS family protein4.8e-1537.4Show/hide
Query:  SSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLV
        S+K K S+    +KIVS + +V     +E+  ++KC++++  + K++K    DV     T      R  S+A +L     ILR  +E+L ++E SR SLV
Subjt:  SSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLV

Query:  SHLREALQEQEFKLEQVRNQLQV
        +HLREAL+EQE +LE +++Q+QV
Subjt:  SHLREALQEQEFKLEQVRNQLQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGTACGTTCAATCCACAAATTTTGGTAGAGAAGCTAGCCAGGCTGAACAACTCACAGGCGAGCATTGAGACTTTATCCCACTGGTGTATATTTCACATG
AACAAAGCCAAGCAAGTTGTAGAAACATGGGATAAGCAGTTTCATTGTTCTCCACGTGAGCAGAGGTTGGCCTATCTGTACCTTGCAAATGACATTTTGCAGAAC
AGTAGGCGAAAAGGCTCAGAGTTTGTTGGTGAATTTTGGAAAGTCCTTCCTCATGCACTGCGTGATGTAATTGGGAGCGGGGACGAATTTGGAAGAAATGCTGCC
CTACGACTGATTGGCATTTGGGAAGAGAGAAAAGTTTTTGGATCTCGAGGACAGAGTCTTAAAGAAGAGATAATGGGAAAGCATATGGAAACTGGTAATCGAAAT
GGGAAGCCATTCAGCAGTAAACTGAAACAATCTGCCAGTGTATCGTTGGATAAAATAGTTTCTGGTTACCAAGTTGTTTATGGAAATGAGATTGATGAAGATGCA
GTATTGAGCAAATGCAGGAATTCTATTAGCTATCTCGAGAAACTGGACAAAGAAATTGGCGCTGATGTCAATTCAGGTATTTATACATTGTTGATGGGGCAATAC
CGTGGGTCTTCAATTGCAGATGATTTGCGGGGACATCATACCATTTTAAGGGACTGCATCGAACAATTAACAACAATTGAAACATCTAGGGCAAGCCTCGTGTCT
CATCTGAGAGAGGCTCTTCAAGAACAGGAATTCAAATTGGAGCAAGTCCGAAATCAACTTCAGGTTTGCGTTTCTGCTTCACATTGTCTTGGAAATCAAGTTGAT
GGCGGTCCTTCTCCAATCAATTCTTTTGCTTTCCTGTCATATGATATAGAGCTTTCAAGATTCCGAAGTTCCCTCAACCCTCTTTTTTTCTTGGTAGATAGTTTG
TTGGGTGCTTACGAGTTGGAATTGCCTTTATGCAAAGACCAAGTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
CGCGAGAGAAGACCTGGCGCGCCCAAGTAGCGGCGGCAAATCCCGACCCGATTCACAATCGCAAAGCCAAAATCAGTTCCGTTCCATTCCATTCCACTACCACAC
TTTCCACCAGTTCCCACACCCACACCCACACCCACACCCACACCCACACCCGTGCGGCCCAAACTGTAGCGACGTCGTGTCCAGCCAAAAATACTCCTTAACCAC
ACCGCTATTCTAAAAACCCACCCATCTTATCTAGCCAGGCCACTCCCTGATTCCAAAATCCCCGCTTCCCCTTTCTGGGCTTTCATCTTCTTCTTCACACACTCC
CCCACTTCCCCTTTTTCCCTTCTATTCCCCCTTTGCTCTCTGTTTTCGTAAACCCTTTTACCGTTTCCTGTAATTCCCCTCTTTTCTTCCATGGAGAAAGGCCTC
CAACGGCCTAATTTTGCCCCCTTTTAGCTGCCTTCTCTCTAACCCACATTCCCTTTTCCAGATTGGCCTGTATATTCTACATTATTTCTGCGAAAAGGATATCCA
AATCGATGGGTGGTACGTTCAATCCACAAATTTTGGTAGAGAAGCTAGCCAGGCTGAACAACTCACAGGCGAGCATTGAGACTTTATCCCACTGGTGTATATTTC
ACATGAACAAAGCCAAGCAAGTTGTAGAAACATGGGATAAGCAGTTTCATTGTTCTCCACGTGAGCAGAGGTTGGCCTATCTGTACCTTGCAAATGACATTTTGC
AGAACAGTAGGCGAAAAGGCTCAGAGTTTGTTGGTGAATTTTGGAAAGTCCTTCCTCATGCACTGCGTGATGTAATTGGGAGCGGGGACGAATTTGGAAGAAATG
CTGCCCTACGACTGATTGGCATTTGGGAAGAGAGAAAAGTTTTTGGATCTCGAGGACAGAGTCTTAAAGAAGAGATAATGGGAAAGCATATGGAAACTGGTAATC
GAAATGGGAAGCCATTCAGCAGTAAACTGAAACAATCTGCCAGTGTATCGTTGGATAAAATAGTTTCTGGTTACCAAGTTGTTTATGGAAATGAGATTGATGAAG
ATGCAGTATTGAGCAAATGCAGGAATTCTATTAGCTATCTCGAGAAACTGGACAAAGAAATTGGCGCTGATGTCAATTCAGGTATTTATACATTGTTGATGGGGC
AATACCGTGGGTCTTCAATTGCAGATGATTTGCGGGGACATCATACCATTTTAAGGGACTGCATCGAACAATTAACAACAATTGAAACATCTAGGGCAAGCCTCG
TGTCTCATCTGAGAGAGGCTCTTCAAGAACAGGAATTCAAATTGGAGCAAGTCCGAAATCAACTTCAGGTTTGCGTTTCTGCTTCACATTGTCTTGGAAATCAAG
TTGATGGCGGTCCTTCTCCAATCAATTCTTTTGCTTTCCTGTCATATGATATAGAGCTTTCAAGATTCCGAAGTTCCCTCAACCCTCTTTTTTTCTTGGTAGATA
GTTTGTTGGGTGCTTACGAGTTGGAATTGCCTTTATGCAAAGACCAAGTTCTTTAA
Protein sequenceShow/hide protein sequence
MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAA
LRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNSGIYTLLMGQY
RGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSASHCLGNQVDGGPSPINSFAFLSYDIELSRFRSSLNPLFFLVDSL
LGAYELELPLCKDQVL