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CaUC11G212640 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G212640
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPolyprotein
Genome locationCiama_Chr11:25681509..25681952
RNA-Seq ExpressionCaUC11G212640
SyntenyCaUC11G212640
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653180.1 hypothetical protein Csa_019682, partial [Cucumis sativus]3.4e-1538.61Show/hide
Query:  QIAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        Q+A+IE++L+NW +PKL+ KE++  +TF+  +   + I E  + +     +++L P + + + R +F++LH+  VQVAL+ +FR GLD  V   LRDKRH
Subjt:  QIAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

Query:  K
        +
Subjt:  K

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.5e-1539.39Show/hide
Query:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        +A++E++L+NW +PKL+  +++  +TF+  +   + I E  + +     +I+L P + +LK R  F++LH+G VQVAL+ +FR GLD  V   LRDKRH
Subjt:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

TYK04698.1 polyprotein [Cucumis melo var. makuwa]9.0e-1638.38Show/hide
Query:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        +A++E++L+NW +PKL+  +++  +TF+  +   + I E  + +   + +I+L P++ + K + +F++LH+G VQVAL+ +FR GLD LV   LRDKRH
Subjt:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

TYK28080.1 movement protein [Cucumis melo var. makuwa]4.5e-1539.39Show/hide
Query:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        +A++E++L+NW +PKL+  +++  +TF+  +   + I E  + +     +I+L P + +LK R  F++LH+G VQVAL+ +FR GLD  V   LRDKRH
Subjt:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

XP_016900528.1 PREDICTED: uncharacterized protein LOC107990934 [Cucumis melo]9.0e-1638.38Show/hide
Query:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        +A++E++L+NW +PKL+  +++  +TF+  +   + I E  + +   + +I+L P++ + K + +F++LH+G VQVAL+ +FR GLD LV   LRDKRH
Subjt:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

TrEMBL top hitse value%identityAlignment
A0A0A0M024 Uncharacterized protein1.7e-1538.61Show/hide
Query:  QIAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        Q+A+IE++L+NW +PKL+ KE++  +TF+  +   + I E  + +     +++L P + + + R +F++LH+  VQVAL+ +FR GLD  V   LRDKRH
Subjt:  QIAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

Query:  K
        +
Subjt:  K

A0A1S4DX30 uncharacterized protein LOC1079909344.4e-1638.38Show/hide
Query:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        +A++E++L+NW +PKL+  +++  +TF+  +   + I E  + +   + +I+L P++ + K + +F++LH+G VQVAL+ +FR GLD LV   LRDKRH
Subjt:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

A0A5D3BG41 Enzymatic polyprotein2.2e-1539.39Show/hide
Query:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        +A++E++L+NW +PKL+  +++  +TF+  +   + I E  + +     +I+L P + +LK R  F++LH+G VQVAL+ +FR GLD  V   LRDKRH
Subjt:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

A0A5D3C0A5 Polyprotein4.4e-1638.38Show/hide
Query:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        +A++E++L+NW +PKL+  +++  +TF+  +   + I E  + +   + +I+L P++ + K + +F++LH+G VQVAL+ +FR GLD LV   LRDKRH
Subjt:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

A0A5D3DXV6 Movement protein2.2e-1539.39Show/hide
Query:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH
        +A++E++L+NW +PKL+  +++  +TF+  +   + I E  + +     +I+L P + +LK R  F++LH+G VQVAL+ +FR GLD  V   LRDKRH
Subjt:  IAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFLHVGAVQVALRLMFRSGLDTLVLAILRDKRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCCTAAGAAAGATTCTATTTAAGAAGGCTCCAACAAAAGAGCTTACTCAACATGAAGTACATGAGCAACATAAAGCTTCCTCTAATGATGTCAATCTCACTAA
TGAATATTTGCAAATAGCAAAGATTGAGCATCAACTTCAGAATTGGAGACTACCCAAATTAGATACAAAAGAAATTTTTGCACATAGCACCTTTAGTTTGAAAGAAAATT
TGTGTGTCAAAATAGTCGAAAGAAAAATACCAGTCTACGGAAGCATAGATTCAATTCAATTATTTCCAAGAGATGATATCTTAAAATATAGGAGAGAATTTGAATTTCTT
CACGTAGGAGCAGTGCAAGTGGCACTAAGACTAATGTTTAGATCAGGATTAGATACTCTTGTTCTTGCAATCCTTAGAGATAAGAGGCATAAGACTTCGCAAACTCCCTT
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCCTAAGAAAGATTCTATTTAAGAAGGCTCCAACAAAAGAGCTTACTCAACATGAAGTACATGAGCAACATAAAGCTTCCTCTAATGATGTCAATCTCACTAA
TGAATATTTGCAAATAGCAAAGATTGAGCATCAACTTCAGAATTGGAGACTACCCAAATTAGATACAAAAGAAATTTTTGCACATAGCACCTTTAGTTTGAAAGAAAATT
TGTGTGTCAAAATAGTCGAAAGAAAAATACCAGTCTACGGAAGCATAGATTCAATTCAATTATTTCCAAGAGATGATATCTTAAAATATAGGAGAGAATTTGAATTTCTT
CACGTAGGAGCAGTGCAAGTGGCACTAAGACTAATGTTTAGATCAGGATTAGATACTCTTGTTCTTGCAATCCTTAGAGATAAGAGGCATAAGACTTCGCAAACTCCCTT
TTAG
Protein sequenceShow/hide protein sequence
MSLLRKILFKKAPTKELTQHEVHEQHKASSNDVNLTNEYLQIAKIEHQLQNWRLPKLDTKEIFAHSTFSLKENLCVKIVERKIPVYGSIDSIQLFPRDDILKYRREFEFL
HVGAVQVALRLMFRSGLDTLVLAILRDKRHKTSQTPF