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CaUC11G212770 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G212770
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionChalcone-flavonone isomerase family protein
Genome locationCiama_Chr11:25841998..25845849
RNA-Seq ExpressionCaUC11G212770
SyntenyCaUC11G212770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACR34547.1 unknown [Zea mays]1.2e-0442.22Show/hide
Query:  RYIERQSVSRISRPDSD--PYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASL
        R + + S +  + P +   PYT+TG+ R+A FF+P A      PP      RR QR   R  EL P A+ +A S+AAR++TM VSKL SL
Subjt:  RYIERQSVSRISRPDSD--PYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASL

KAF7830868.1 hypothetical protein G2W53_013201 [Senna tora]5.0e-0666.67Show/hide
Query:  NPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASL
        NP AA   A    VSKAN  L  RAH TIE +PRA I+AQS AA IITMFVSKLASL
Subjt:  NPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASL

KCW47523.1 hypothetical protein EUGRSUZ_K01285 [Eucalyptus grandis]1.3e-1460Show/hide
Query:  SVSRISRPDSDPYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLLYE
        SV+ I    +DPYTATGIWR +   +PV A   A    VS  N RLQR A RT+ELSPRAQI+A S AAR+ITM VSKL SL+YE
Subjt:  SVSRISRPDSDPYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLLYE

KXG33623.1 hypothetical protein SORBI_3003G338600 [Sorghum bicolor]5.5e-0552.05Show/hide
Query:  PYTATGIWRNALFFNPVAARREAVPPPVSKAN-RRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLL
        PYT+TG+ R+A F +P A    A  PP S ++ RR QR   R  EL P A+ +A S+AAR++TM VSKLASLL
Subjt:  PYTATGIWRNALFFNPVAARREAVPPPVSKAN-RRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLL

RCV17245.1 hypothetical protein SETIT_3G204600v2 [Setaria italica]7.2e-0546.99Show/hide
Query:  SRPDSDPYTATGIWRNALFFNPVAA-------RREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLAS
        S P   PYT+TG+ R+A F  P A          +A  PP   A R   R AHR  ELSP A  +A+ +AAR+ITM VSKLAS
Subjt:  SRPDSDPYTATGIWRNALFFNPVAA-------RREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLAS

TrEMBL top hitse value%identityAlignment
A0A059A153 Uncharacterized protein6.4e-1560Show/hide
Query:  SVSRISRPDSDPYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLLYE
        SV+ I    +DPYTATGIWR +   +PV A   A    VS  N RLQR A RT+ELSPRAQI+A S AAR+ITM VSKL SL+YE
Subjt:  SVSRISRPDSDPYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLLYE

A0A1B6Q6S2 Uncharacterized protein2.7e-0552.05Show/hide
Query:  PYTATGIWRNALFFNPVAARREAVPPPVSKAN-RRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLL
        PYT+TG+ R+A F +P A    A  PP S ++ RR QR   R  EL P A+ +A S+AAR++TM VSKLASLL
Subjt:  PYTATGIWRNALFFNPVAARREAVPPPVSKAN-RRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLL

A0A287LWU2 Uncharacterized protein4.6e-0545.16Show/hide
Query:  PYTATGIWRNALFFNPV--------AARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLLYEFRVL-LPLDGA
        PYT+ G   +  F +P         AA      PP S A RR  R  HR  ELSP A+  A+S+AAR+ITM VSKLAS L   R     LDGA
Subjt:  PYTATGIWRNALFFNPV--------AARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASLLYEFRVL-LPLDGA

A0A368QGZ0 Uncharacterized protein3.5e-0546.99Show/hide
Query:  SRPDSDPYTATGIWRNALFFNPVAA-------RREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLAS
        S P   PYT+TG+ R+A F  P A          +A  PP   A R   R AHR  ELSP A  +A+ +AAR+ITM VSKLAS
Subjt:  SRPDSDPYTATGIWRNALFFNPVAA-------RREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLAS

C4J047 Uncharacterized protein6.0e-0542.22Show/hide
Query:  RYIERQSVSRISRPDSD--PYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASL
        R + + S +  + P +   PYT+TG+ R+A FF+P A      PP      RR QR   R  EL P A+ +A S+AAR++TM VSKL SL
Subjt:  RYIERQSVSRISRPDSD--PYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRAQINAQSNAARIITMFVSKLASL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCCGGTTGGTCGGTTTCCGGCTTCAGCTGCCGCCGATTCTGAAGCCGACTGTTGTTCGAGCAGTGATTGACGACATGTTGGACACGACGAATGGGAAG
CCAACCAGGTATCGATACATCGAACGGCAATCCGTTTCTCGGATCTCTAGACCCGATTCCGACCCGTATACGGCAACTGGAATTTGGCGTAATGCGCTTTTCTTT
AACCCTGTAGCGGCGAGGCGCGAGGCTGTTCCGCCGCCTGTCTCGAAGGCGAACCGCCGGCTGCAGCGGAGGGCGCACCGGACAATCGAGTTGAGTCCTAGAGCG
CAAATCAACGCGCAGAGTAACGCGGCAAGAATTATCACCATGTTCGTGTCGAAATTGGCTTCGTTGCTATATGAATTTCGCGTTCTGCTTCCATTAGACGGTGCC
GCCGTCGTATCGGCGTCGAGGAGGAGGCGGTTGGTTCGTAAGGTTTTAAGATTACAATACCTTCCCTTCCCCCCCCCCACATTAGTCGTTAATGGGTTAAGTTAC
AAAACCAAAGCATTTTATAGTATGCAAATTGTGAGACGCAATTTTAGAGAGGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCCGGTTGGTCGGTTTCCGGCTTCAGCTGCCGCCGATTCTGAAGCCGACTGTTGTTCGAGCAGTGATTGACGACATGTTGGACACGACGAATGGGAAG
CCAACCAGGTATCGATACATCGAACGGCAATCCGTTTCTCGGATCTCTAGACCCGATTCCGACCCGTATACGGCAACTGGAATTTGGCGTAATGCGCTTTTCTTT
AACCCTGTAGCGGCGAGGCGCGAGGCTGTTCCGCCGCCTGTCTCGAAGGCGAACCGCCGGCTGCAGCGGAGGGCGCACCGGACAATCGAGTTGAGTCCTAGAGCG
CAAATCAACGCGCAGAGTAACGCGGCAAGAATTATCACCATGTTCGTGTCGAAATTGGCTTCGTTGCTATATGAATTTCGCGTTCTGCTTCCATTAGACGGTGCC
GCCGTCGTATCGGCGTCGAGGAGGAGGCGGTTGGTTCGTAAGGTTTTAAGATTACAATACCTTCCCTTCCCCCCCCCCACATTAGTCGTTAATGGGTTAAGTTAC
AAAACCAAAGCATTTTATAGTATGCAAATTGTGAGACGCAATTTTAGAGAGGAAGGATGA
Protein sequenceShow/hide protein sequence
MDFRLVGFRLQLPPILKPTVVRAVIDDMLDTTNGKPTRYRYIERQSVSRISRPDSDPYTATGIWRNALFFNPVAARREAVPPPVSKANRRLQRRAHRTIELSPRA
QINAQSNAARIITMFVSKLASLLYEFRVLLPLDGAAVVSASRRRRLVRKVLRLQYLPFPPPTLVVNGLSYKTKAFYSMQIVRRNFREEG