; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G213280 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G213280
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLate embryogenesis abundant protein (LEA) family protein
Genome locationCiama_Chr11:26453950..26482453
RNA-Seq ExpressionCaUC11G213280
SyntenyCaUC11G213280
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7822332.1 stress-induced protein KIN2-like [Senna tora]3.6e-2470.71Show/hide
Query:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDA
        MD++ KMSY+AG+A+GQAQEKA+ MMDKAS++AQSAKES+Q+  +Q+KA A+GA +AEKAS LMDKASD AQSAKESIQ+ G+QVK  AQGAA+AVK+A
Subjt:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDA

KAG5247471.1 late embryogenesis abundant protein [Salix suchowensis]2.1e-1663.27Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDA
        DNSQKMSY AGE KGQAQEKAS +MD+A + AQSAKESVQE               +KAS LMD+A +AAQSAKES+QE GQQV  KAQGA + VK+A
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDA

RXH68262.1 hypothetical protein DVH24_028409 [Malus domestica]4.9e-2160Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDA----------------------EKASNLMDKASDAAQSAKESIQ
        DNSQKMSY AGEAKGQAQEKAS MMDKA++ AQSAKE++Q+A Q ++AKAQGA DA                      EKAS +MDKA++AAQSAKE++Q
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDA----------------------EKASNLMDKASDAAQSAKESIQ

Query:  ETGQQVKEKAQGAADAVKDA
        + GQ ++ KAQGAADAVK+A
Subjt:  ETGQQVKEKAQGAADAVKDA

XP_011011268.1 PREDICTED: late embryogenesis abundant protein 1-like [Populus euphratica]4.3e-1763.27Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDA
        DN+QKMSY AGE KGQAQEKASN+MD+A + AQSAKESVQE               EKASNLMD+A +AAQSAKES+QE GQQV+ K Q A + VK+A
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDA

XP_022159706.1 stress-induced protein KIN2-like [Momordica charantia]6.2e-1686.15Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK
        DNSQKMSYHAGEAKGQAQEKASNMMDKASD AQSAKESVQEA QQVKAKAQGA DA K +  M+K
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK

TrEMBL top hitse value%identityAlignment
A0A2N9IMZ1 Uncharacterized protein1.1e-1544.51Show/hide
Query:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDA-------------------------------------------
        MDNSQ  SY AG+ KGQ QEKASNMMDKAS+ AQSA ES QEA QQVKAKAQGA DA                                           
Subjt:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDA-------------------------------------------

Query:  ---------------------EKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDAI
                             EKASNLM+KA +A QSAKE+  E G+QV  KAQGAA+  KDA+
Subjt:  ---------------------EKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDAI

A0A498HEG5 Uncharacterized protein2.4e-2160Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDA----------------------EKASNLMDKASDAAQSAKESIQ
        DNSQKMSY AGEAKGQAQEKAS MMDKA++ AQSAKE++Q+A Q ++AKAQGA DA                      EKAS +MDKA++AAQSAKE++Q
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDA----------------------EKASNLMDKASDAAQSAKESIQ

Query:  ETGQQVKEKAQGAADAVKDA
        + GQ ++ KAQGAADAVK+A
Subjt:  ETGQQVKEKAQGAADAVKDA

A0A6J1BXT9 stress-induced protein KIN2-like3.3e-1589.66Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEK
        DNSQKM+YHAGEAKGQAQEKASN+MDKASD AQSAKESVQEA QQVKAKAQGA+DA K
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEK

A0A6J1E4Q8 stress-induced protein KIN2-like3.0e-1686.15Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK
        DNSQKMSYHAGEAKGQAQEKASNMMDKASD AQSAKESVQEA QQVKAKAQGA DA K +  M+K
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK

A0A6J1E4S0 stress-induced protein KIN2-like2.0e-1583.08Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK
        DNSQKMSYHAGEAKGQAQEKASNMMDKASD AQSAKES+QEA QQVKAKAQG  DA K +  M+K
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 11.4e-0540Show/hide
Query:  SQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKD
        S   SY AGE  G+ +EK + M+    D AQ+AKE  Q+A Q  K K      A K     +K    AQ+AKE  Q+T Q  K++ Q  A A KD
Subjt:  SQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKD

O49817 Late embryogenesis abundant protein 24.7e-0641.05Show/hide
Query:  SQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKD
        S   SY AGEAKG+ +EK + M+    D AQ+AKE  Q+A Q  K K      A K     +K    AQ+AK+  Q+T Q  KEKAQ      K+
Subjt:  SQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKD

P13934 Late embryogenesis abundant protein 764.4e-0435.64Show/hide
Query:  SQKMSYHAGEAKGQAQEKASN----MMDKASDVAQSAKESVQEARQQVKAKAQGAVD--AEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVK
        S + SY AGE +G+ QEK       M DKA +      ++ Q+A+Q+ +  AQ A D  ++ A     KA + AQ+AK+   +  Q  ++KAQ  A A K
Subjt:  SQKMSYHAGEAKGQAQEKASN----MMDKASDVAQSAKESVQEARQQVKAKAQGAVD--AEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVK

Query:  D
        D
Subjt:  D

Q94JF2 Late embryogenesis abundant protein 143.3e-0434.38Show/hide
Query:  QKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDA--EKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKD
        ++ SYHAGE K +A+EK   MM  A + A+ AK++  +A  +   +  GA +A  EKA    D   + A  AK++  +   +  +K +GAA A +D
Subjt:  QKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDA--EKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKD

Q96270 Late embryogenesis abundant protein 73.9e-0537.61Show/hide
Query:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQ-----------ETGQQVKEKA
        M + Q+ SY AGE +G+AQEK    M    D  Q+AK+  QE  Q  + KA      E A +  DK S AAQ+ +E  Q           ETG+ +K KA
Subjt:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQ-----------ETGQQVKEKA

Query:  QGAADAVKD
          AA+  K+
Subjt:  QGAADAVKD

Arabidopsis top hitse value%identityAlignment
AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein2.8e-0637.61Show/hide
Query:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQ-----------ETGQQVKEKA
        M + Q+ SY AGE +G+AQEK    M    D  Q+AK+  QE  Q  + KA      E A +  DK S AAQ+ +E  Q           ETG+ +K KA
Subjt:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQ-----------ETGQQVKEKA

Query:  QGAADAVKD
          AA+  K+
Subjt:  QGAADAVKD

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein2.8e-0637.61Show/hide
Query:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQ-----------ETGQQVKEKA
        M + Q+ SY AGE +G+AQEK    M    D  Q+AK+  QE  Q  + KA      E A +  DK S AAQ+ +E  Q           ETG+ +K KA
Subjt:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQ-----------ETGQQVKEKA

Query:  QGAADAVKD
          AA+  K+
Subjt:  QGAADAVKD

AT3G02480.1 Late embryogenesis abundant protein (LEA) family protein3.2e-1055.22Show/hide
Query:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKA
        MDN Q  SY AG+A GQ +EKA  MMDKA D A SA++S+Q+  QQ+K KAQGA D  K    M+K+
Subjt:  MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKA

AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein4.5e-1262.5Show/hide
Query:  NSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK
        NSQ +S+ AG+AKGQ QEKAS MMDKAS+ AQSAKES++E  QQ+K KAQGA ++ K +  M+K
Subjt:  NSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK

AT5G53820.1 Late embryogenesis abundant protein (LEA) family protein5.8e-1261.54Show/hide
Query:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK
        +NSQ MS++AG+AKGQ QEKASN++DKAS+ AQSAKES+QE  QQ+K KAQGA +  K    + K
Subjt:  DNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAACTCTCAAAAGATGAGCTACCACGCTGGAGAAGCCAAGGGTCAAGCTCAGGAGAAGGCGAGCAATATGATGGACAAGGCAAGTGATGTAGCCCAATCAGCTAA
GGAATCTGTACAAGAAGCAAGACAACAGGTGAAAGCTAAGGCACAAGGAGCTGTCGATGCTGAAAAGGCGAGCAATTTGATGGACAAGGCAAGTGATGCAGCGCAATCAG
CTAAAGAATCAATACAAGAAACAGGACAACAGGTGAAGGAGAAGGCGCAAGGGGCCGCTGATGCGGTTAAGGATGCAATTAACAAATGA
mRNA sequenceShow/hide mRNA sequence
AAACTATATTCACCAAGTCTTTCTCAAGTTCTAAGCTCCTAACTTTTGTGTTTTTCAAATTCATTAAAAAAAAAAAAATGGATAACTCTCAAAAGATGAGCTACCACGCT
GGAGAAGCCAAGGGTCAAGCTCAGGAGAAGGCGAGCAATATGATGGACAAGGCAAGTGATGTAGCCCAATCAGCTAAGGAATCTGTACAAGAAGCAAGACAACAGGTGAA
AGCTAAGGCACAAGGAGCTGTCGATGCTGAAAAGGCGAGCAATTTGATGGACAAGGCAAGTGATGCAGCGCAATCAGCTAAAGAATCAATACAAGAAACAGGACAACAGG
TGAAGGAGAAGGCGCAAGGGGCCGCTGATGCGGTTAAGGATGCAATTAACAAATGAAAATGTCTCCAATTTCATGTTTTTTGAGATTTTTTTCAAAGGCTCCCCTCAATT
TTGTTTTTCGCTTAGATTTTTTCTTTTCCCTCTATTGAATAAAGCTAGCATTATGTAAGAGCCTTGAAAAAAAAAAAAGGTCTCACATGGCTCATTAGCCTTTTTTGCCA
ATAAAAATGGGTTGCTTTTGTAATGTATCGATTTACATCTTTATTATGTTTTTCTTTTATAAATATTGTGTAATATTCCTATAATTTTACCAATTAAATTCTTACATTTA
CGTAATCAAAT
Protein sequenceShow/hide protein sequence
MDNSQKMSYHAGEAKGQAQEKASNMMDKASDVAQSAKESVQEARQQVKAKAQGAVDAEKASNLMDKASDAAQSAKESIQETGQQVKEKAQGAADAVKDAINK