; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G214080 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G214080
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionglycine-rich RNA-binding protein-like
Genome locationCiama_Chr11:27377246..27378534
RNA-Seq ExpressionCaUC11G214080
SyntenyCaUC11G214080
Gene Ontology termsGO:0006858 - extracellular transport (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:1990428 - miRNA transport (biological process)
GO:0050688 - regulation of defense response to virus (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005615 - extracellular space (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0035198 - miRNA binding (molecular function)
GO:0035197 - siRNA binding (molecular function)
GO:0005198 - structural molecule activity (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
InterPro domainsIPR035979 - RNA-binding domain superfamily
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 - RNA recognition motif domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571119.1 hypothetical protein SDJN03_30034, partial [Cucurbita argyrosperma subsp. sororia]5.6e-6292.44Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRRE-GGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR--GGGGGSEGGWRN
        GGGGGYGGRRE GGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY+R  GGGGGSEGGWRN
Subjt:  GGGGGYGGRRE-GGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR--GGGGGSEGGWRN

XP_022943401.1 glycine-rich RNA-binding protein-like [Cucurbita moschata]3.9e-6391.91Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR----GGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY+R    GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR----GGGGGSEGGWRN

XP_022986624.1 glycine-rich RNA-binding protein-like [Cucurbita maxima]7.6e-5990.75Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR--G
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R  G
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR--G

Query:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGSEGGWRN
        GGGGGGGYGGRRE GGGGGY+RGGGGY  GGGGGGYGGGGYGGGRDRGY GGGDGGSRY+RGGGGGSEGGWRN
Subjt:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGSEGGWRN

XP_023512522.1 glycine-rich RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]4.9e-5891.86Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTFAEEE+MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGY-GGGRDRGYGGGGDGGSRYSR--GGGGGSEGGWRN
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGYGGGGY GGGRDRGY GGGDGGSRY+R  GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGY-GGGRDRGYGGGGDGGSRYSR--GGGGGSEGGWRN

XP_038901242.1 glycine-rich RNA-binding protein-like [Benincasa hispida]8.4e-5891.81Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVE+RCFVGGLAWATD+ ALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGG    GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGY-GGGGDGGSRYSR-GGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RG GGY  GGGGYGGGGYGGGRDR Y GGGGDGGSRYSR GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGY-GGGGDGGSRYSR-GGGGGSEGGWRN

TrEMBL top hitse value%identityAlignment
A0A1S3CE16 glycine-rich RNA-binding protein 1-like1.3e-5388.51Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG-
        MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIV+DRETGRSRGFGFVTF+EE+AMRSAIEAMNG  LDGR+ITVNEAQQRGGGGGGG   GG 
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG-

Query:  -GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGD-GGSRYSR-GGGGGSEGGWRN
         GGGGGGYGGRR+GGGGGG+SRGGGGYGGGGGGY GGGGYGGGRDRGYGGGG  GG R +R GGGGGSEGGWRN
Subjt:  -GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGD-GGSRYSR-GGGGGSEGGWRN

A0A6J1FRL7 glycine-rich RNA-binding protein-like1.9e-6391.91Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR----GGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY+R    GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSR----GGGGGSEGGWRN

A0A6J1G631 glycine-rich RNA-binding protein 1-like1.0e-5689.53Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF +EEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGG    GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDG-GSRYSR--GGGGGSEGGWRN
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGG G G RY R  GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDG-GSRYSR--GGGGGSEGGWRN

A0A6J1JGK0 glycine-rich RNA-binding protein-like3.7e-5990.75Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR--G
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R  G
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR--G

Query:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGSEGGWRN
        GGGGGGGYGGRRE GGGGGY+RGGGGY  GGGGGGYGGGGYGGGRDRGY GGGDGGSRY+RGGGGGSEGGWRN
Subjt:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGSEGGWRN

A0A6J1L652 glycine-rich RNA-binding protein 1-like isoform X11.0e-5689.71Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR--GGGGGGGYSRG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF +EEAMRSAIEAMNGQNLDGRSITVNEAQQR  GGGGGGGY+R 
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR--GGGGGGGYSRG

Query:  GGGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGDG-GSRYSR--GGGGGSEGGWRN
        GGGGGGGYGGRREGGGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGG G G RY R  GGGGGSEGGWRN
Subjt:  GGGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGDG-GSRYSR--GGGGGSEGGWRN

SwissProt top hitse value%identityAlignment
P49311 Glycine-rich RNA-binding protein GRP2A8.7e-3468.75Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  +LE AFS FG++V++KI+NDRETGRSRGFGFVTF +E++M+ AIE MNGQ+LDGRSITVNEAQ RG G GGG   GGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  G--GGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGG--RDRGYGGGGDGGSRYSRGGGGGSEGGW
        G  GGGGYGG   GGG GG  R GGGY GGGGGY     GGGGYGGG  RD G  GGG+GG     G GGG  GGW
Subjt:  G--GGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGG--RDRGYGGGGDGGSRYSRGGGGGSEGGW

Q03250 Glycine-rich RNA-binding protein 74.2e-3668Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AF+ +GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+  GGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYG--GGGDGGSRYSRGGGGG
             GGGGGY GG    GGGGG   GGGGY GGGGGY     GGG YGGGR  G G  GGG+GG     GGGGG
Subjt:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYG--GGGDGGSRYSRGGGGG

Q03878 Glycine-rich RNA-binding protein2.6e-3873.58Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG---
        + VEYRCFVGGLAWAT+  +LE+AFS FGDI ++KI+NDRETGRSRGFGFVTF +E++MR AIE MNGQ LDGR+ITVNEAQ RG GGGGG   GGG   
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG---

Query:  GGGGGYGGRREGGGGGGY----SRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY
        GGGGGYGGRREGGGGGGY      GGGGYGGGGGGYGG   GG  D GYGGGG GGSR+
Subjt:  GGGGGYGGRREGGGGGGY----SRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRY

Q43472 Glycine-rich RNA-binding protein blt8018.7e-3468.86Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG
        + VEYRCFVGGL WATD  +L+ AFS +GD++++KI+ DRETGRSRGFGFVTFA +EAMR AIEAMNGQ+LDGR+ITVNEAQ R   GGGG+    GGGG
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG

Query:  GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGG--GRDRGYGGGGDGGSRYSRGGGGGSEGGWR
        GGYGG+R  GGGGGY  GGGGYGGG  G GGGGYG   G   GYGGGG GG   SRGG GG  G WR
Subjt:  GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGG--GRDRGYGGGGDGGSRYSRGGGGGSEGGWR

Q99070 Glycine-rich RNA-binding protein 22.3e-3464.97Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MA++ VEYRCFVGGLAWAT++  LE+AF+ FG ++++K++ DRETGRSRGFGFVTF+ E++M  AIE MNG+ LDGR+ITVN+AQ RGGGGGGG   G G
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGG---GGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGG-----GGSEGGWRN
        GGGGGYGGR     GGGY  GGGGYGG   GGGGYGGGGYGGG   GY GG +GG  Y  GGG     G S G WRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGG---GGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGG-----GGSEGGWRN

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 23.0e-3768Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AF+ +GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+  GGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYG--GGGDGGSRYSRGGGGG
             GGGGGY GG    GGGGG   GGGGY GGGGGY     GGG YGGGR  G G  GGG+GG     GGGGG
Subjt:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYG--GGGDGGSRYSRGGGGG

AT2G21660.2 cold, circadian rhythm, and rna binding 21.1e-3671.34Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AF+ +GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+ RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYG--GGGDGGSRYSRGGGGG
          GGG GGRRE  GGGGYS GGGGY   GG  GGG YGGGR  G G  GGG+GG     GGGGG
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYG--GGGDGGSRYSRGGGGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 12.2e-3266.86Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRG--------GGGGGGY
        S VEYRCFVGGLAWAT+   L++ FS FGD++++KI+NDRE+GRSRGFGFVTF +E+AMR AIE MNG+ LDGR ITVNEAQ RG        GG GGGY
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRG--------GGGGGGY

Query:  SRGGGGG-GGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG--RDRGYGGGGDGGSRYSRGGGG
          GGGGG  GG GG   GGGGGGY R  GGYG GGGG GG GYGGG  R+ G  GGGDGGS Y  GGGG
Subjt:  SRGGGGG-GGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG--RDRGYGGGGDGGSRYSRGGGG

AT4G39260.2 cold, circadian rhythm, and RNA binding 13.2e-3167.88Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG
        S VEYRCFVGGLAWAT+   L++ FS FGD++++KI+NDRE+GRSRGFGFVTF +E+AMR AIE MNG+ LDGR ITVNEAQ RG GGGGG   G GG G
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG

Query:  GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG
        GGY      GGGGGYS      GGGGGGY GGG GGG
Subjt:  GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG

AT5G61030.1 glycine-rich RNA-binding protein 34.8e-1953.33Show/hide
Query:  RCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR---GGGGGGGYSRGGGGGGGG
        + F+GG+A++ D ++L +AF+ +G++V+ +++ DRETGRSRGFGFVTF   EA  SAI+A++G++L GR + VN A  R   GG GGGGY    GGGGGG
Subjt:  RCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR---GGGGGGGYSRGGGGGGGG

Query:  YGGRREGGGGGGYSRGGGGYGGGGGGYG---GGGYGGGRDRGYGGGGDGGSRYSRGGGGGSEGGW
        YGG    GGG G   G GGYGGG GGYG   GGGYGG    GYGG G GG      G GG+ GG+
Subjt:  YGGRREGGGGGGYSRGGGGYGGGGGGYG---GGGYGGGRDRGYGGGGDGGSRYSRGGGGGSEGGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCTTCTGTTGAGTACCGTTGCTTTGTGGGTGGCCTTGCTTGGGCCACTGATAGTAATGCCTTAGAGAAGGCTTTCTCTCCATTTGGCGATATCGTTGAAGC
CAAGATCGTCAACGATCGTGAAACCGGAAGGTCGAGAGGATTTGGTTTCGTTACGTTTGCTGAGGAGGAGGCGATGAGAAGTGCTATTGAAGCAATGAACGGCCAGAATC
TTGACGGTCGTAGTATTACCGTCAACGAGGCGCAGCAAAGAGGTGGAGGTGGCGGCGGTGGTTACAGCCGCGGTGGTGGTGGTGGTGGAGGTGGATACGGTGGACGCCGT
GAAGGAGGAGGCGGTGGTGGTTACAGCCGTGGAGGCGGTGGTTACGGTGGCGGAGGAGGTGGATACGGAGGAGGTGGTTACGGTGGTGGACGTGACCGTGGCTACGGTGG
TGGTGGTGATGGTGGATCTCGTTACTCCAGGGGTGGCGGCGGTGGATCTGAAGGAGGATGGAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
GGTGCATCCAAACAAGGTGCCAATCAAACCGCCTTTTGGGTTAACCCTGATTGCAAAAGAACCGCGTTGGTTCAATTTCCAGCAAACCCTAAAACTAACCCTAGTTAAAT
CTCCCCTCTATATAAGAAACTCTATGGTTCTTCCCCATTTCATTCTGCTCTTGTTTAGAGGTTGGGATTTGTGTTGATTCACCTCTTTCTCTCTAAATCTTTTCCTTTTT
AGGGTTAGGGTTTTCAGTTCTGATTCCATGGCTTCCTCTTCTGTTGAGTACCGTTGCTTTGTGGGTGGCCTTGCTTGGGCCACTGATAGTAATGCCTTAGAGAAGGCTTT
CTCTCCATTTGGCGATATCGTTGAAGCCAAGATCGTCAACGATCGTGAAACCGGAAGGTCGAGAGGATTTGGTTTCGTTACGTTTGCTGAGGAGGAGGCGATGAGAAGTG
CTATTGAAGCAATGAACGGCCAGAATCTTGACGGTCGTAGTATTACCGTCAACGAGGCGCAGCAAAGAGGTGGAGGTGGCGGCGGTGGTTACAGCCGCGGTGGTGGTGGT
GGTGGAGGTGGATACGGTGGACGCCGTGAAGGAGGAGGCGGTGGTGGTTACAGCCGTGGAGGCGGTGGTTACGGTGGCGGAGGAGGTGGATACGGAGGAGGTGGTTACGG
TGGTGGACGTGACCGTGGCTACGGTGGTGGTGGTGATGGTGGATCTCGTTACTCCAGGGGTGGCGGCGGTGGATCTGAAGGAGGATGGAGAAATTAGGCCGGCTTTTATG
ATTTTTTAGCTTTTGGTTTCGAAGTATTAGTGTGGTGAAGGAAAAATCTTAGCAGGATCTCTTTTTCGTTTTCATTTTGTGGCTCTGTTTACTCTGTTCCGTTTGGGTGC
TCTCTTTTTTGACCGATTACCGATGGGTTTCGTGTTCCTTATTATCGATCTATGTTACGATGAAAAAAATTACATAAGAAAATGAAGTACAGCTCTTCGTTCTCGC
Protein sequenceShow/hide protein sequence
MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGGGGYGGRR
EGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGDGGSRYSRGGGGGSEGGWRN