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CaUC11G214640 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G214640
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr11:27986375..27986923
RNA-Seq ExpressionCaUC11G214640
SyntenyCaUC11G214640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI21545.3 unnamed protein product, partial [Vitis vinifera]3.0e-0653.97Show/hide
Query:  TSSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRH------PRKDKTAKALKPGEGESS
        T+SQAW+RRKLLGG+CECFEKQAF +  +  I  ++L         ++   A+ALKPGEGESS
Subjt:  TSSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRH------PRKDKTAKALKPGEGESS

KAF4388943.1 hypothetical protein F8388_026672 [Cannabis sativa]1.2e-0590.91Show/hide
Query:  LRHPRKDKTAKALKPGEGESSQAATANVLRNKP
        LRHPRKDK A ALKPGEGESS AATANVLRNKP
Subjt:  LRHPRKDKTAKALKPGEGESSQAATANVLRNKP

KAF8109572.1 hypothetical protein N665_0094s0039, partial [Sinapis alba]9.8e-0545.45Show/hide
Query:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRKDKT---------AKALKPGEGESSQAATANVLRNKP
        SSQAWR+ K LGGHCECFEKQA +   ++R       HPRKDK          AKAL  G  E  +    NV  ++P
Subjt:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRKDKT---------AKALKPGEGESSQAATANVLRNKP

XP_007163926.1 hypothetical protein PHAVU_L005000g, partial [Phaseolus vulgaris]3.0e-0653.52Show/hide
Query:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESL-------------RHPRKDKTAKALKPGEGESSQA
        SSQA  RRKLLGGHCEC EKQAF I        +SL             R P   + AKALKPGEGES QA
Subjt:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESL-------------RHPRKDKTAKALKPGEGESSQA

XP_007163927.1 hypothetical protein PHAVU_L005100g, partial [Phaseolus vulgaris]5.7e-0548.57Show/hide
Query:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRKD------------KTAKALKPGEGESSQA
        SSQA  RRK LGGHCEC EKQAF I     I+N+++ + +K+               KALKPGEGE+ QA
Subjt:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRKD------------KTAKALKPGEGESSQA

TrEMBL top hitse value%identityAlignment
A0A0S3QX07 Uncharacterized protein6.8e-0459.52Show/hide
Query:  TSSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRK
        +SSQAWRRRKL GGHCEC EKQA     L  ++ E L+H +K
Subjt:  TSSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRK

A0A5K1BHC7 Uncharacterized protein (Fragment)2.3e-0488.46Show/hide
Query:  TSSQAWRRRKLLGGHCECFEKQAFKI
        TSSQAWRRRKLL GHCECFEKQAF +
Subjt:  TSSQAWRRRKLLGGHCECFEKQAFKI

A0A7J6H1A1 Uncharacterized protein5.6e-0690.91Show/hide
Query:  LRHPRKDKTAKALKPGEGESSQAATANVLRNKP
        LRHPRKDK A ALKPGEGESS AATANVLRNKP
Subjt:  LRHPRKDKTAKALKPGEGESSQAATANVLRNKP

V7D2Y8 Uncharacterized protein (Fragment)1.5e-0653.52Show/hide
Query:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESL-------------RHPRKDKTAKALKPGEGESSQA
        SSQA  RRKLLGGHCEC EKQAF I        +SL             R P   + AKALKPGEGES QA
Subjt:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESL-------------RHPRKDKTAKALKPGEGESSQA

V7D3S2 Uncharacterized protein (Fragment)2.8e-0548.57Show/hide
Query:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRKD------------KTAKALKPGEGESSQA
        SSQA  RRK LGGHCEC EKQAF I     I+N+++ + +K+               KALKPGEGE+ QA
Subjt:  SSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRKD------------KTAKALKPGEGESSQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTAGCTCTCAAGCCTGGCGAAGGCGAAAGCTCTTAGGCGGCCACTGCGAATGTTTTGAGAAACAAGCCTTCAAGATATCATCATTAAGTAGAATTCTTAATGAGAGTCT
CAGACATCCAAGGAAGGATAAAACAGCAAAAGCTCTCAAGCCTGGCGAAGGCGAAAGCTCTCAGGCGGCCACTGCGAATGTTTTGAGAAACAAGCCT
mRNA sequenceShow/hide mRNA sequence
ACTAGCTCTCAAGCCTGGCGAAGGCGAAAGCTCTTAGGCGGCCACTGCGAATGTTTTGAGAAACAAGCCTTCAAGATATCATCATTAAGTAGAATTCTTAATGAGAGTCT
CAGACATCCAAGGAAGGATAAAACAGCAAAAGCTCTCAAGCCTGGCGAAGGCGAAAGCTCTCAGGCGGCCACTGCGAATGTTTTGAGAAACAAGCCT
Protein sequenceShow/hide protein sequence
TSSQAWRRRKLLGGHCECFEKQAFKISSLSRILNESLRHPRKDKTAKALKPGEGESSQAATANVLRNKP