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CaUC11G214980 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G214980
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCiama_Chr11:28253346..28254578
RNA-Seq ExpressionCaUC11G214980
SyntenyCaUC11G214980
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605019.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]5.4e-4391.67Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]5.4e-4391.67Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

XP_022947576.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]1.2e-4290.62Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAF+DLTSRL +
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]7.1e-4391.67Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]7.1e-4390.62Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAF+DLTSRLQ+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

TrEMBL top hitse value%identityAlignment
A0A6J1FVI4 auxin-responsive protein SAUR24-like7.7e-4390.62Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIR LSLVP AKQILKMQSGFTK+QLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHH QG LTIPCKEDAFIDLTSRLQ+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

A0A6J1G6T7 auxin-responsive protein SAUR24-like2.6e-4391.67Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

A0A6J1G6U1 auxin-responsive protein SAUR23-like5.9e-4390.62Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHH QG LTIPCKEDAF+DLTSRL +
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

A0A6J1JHE3 auxin-responsive protein SAUR24-like7.7e-4390.62Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIR LSLVP AKQILKMQSGFTK+QLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHH QG LTIPCKEDAFIDLTSRLQ+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

A0A6J1KZJ6 auxin-responsive protein SAUR24-like3.4e-4391.67Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI
        MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.4e-2057.83Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRL
        AK+IL   +    +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSRL
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR224.7e-2159.49Show/hide
Query:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +E+EFGF H  G LTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.7e-2160.76Show/hide
Query:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +A+YVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSR Q
Subjt:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR191.0e-2059.49Show/hide
Query:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +A+YVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR247.2e-2259.52Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ
        AK+IL   +G   +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.2e-2456.84Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRL
        M IR+  ++  +KQ+LK  S  + + + +PKGH+A+YVGE +Q++RFVVP+TYL+HP FQ+LL  AEEEFGF H  G LTIPC E  FIDL SRL
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRL

AT4G34790.1 SAUR-like auxin-responsive protein family5.1e-2350.93Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLD-----------VPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFI
        MG+ + S++P AKQI K QS   K+              VPKGHVA+YVGE +++KRFVVPI+YLNHP F++ L+ AEEE GFHH  G LTIPC+E++F+
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLD-----------VPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFI

Query:  DLTSRLQI
         L +  Q+
Subjt:  DLTSRLQI

AT4G34810.1 SAUR-like auxin-responsive protein family2.7e-2453.33Show/hide
Query:  MGIRLLSLVPRAKQILKMQSGFTKSQLD------VPKGHVAIYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   +++        VPKGHVA+YVG   E+++KRFVVPI++LNHPSF++ LS AEEEFGF+H  G LTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPRAKQILKMQSGFTKSQLD------VPKGHVAIYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family5.5e-2556.7Show/hide
Query:  MGIRLLSLVPRAKQILK----MQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSR
        M IR+  ++  +KQIL+    + S  + S LDVPKG++A+YVGE   KRFVVP++YL+ PSFQ LL  AEEEFGF H  G LTIPC E+ FIDL SR
Subjt:  MGIRLLSLVPRAKQILK----MQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family5.1e-2359.52Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ
        AK+IL   +G   +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF H  G LTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCGTGCCAAGCAGATCTTAAAGATGCAGTCAGGATTTACCAAAAGTCAGTTGGATGTGCCAAAAGGACATGTAGCTATTTA
CGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCAATAACGTACCTAAACCATCCATCATTCCAACAACTTCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATC
GACAGGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTCGATTGCAAATAGAGCCATTGCATGGGTGGTTTGACAGTTCCCAGCAGAGGATT
TGCTTTGATCTCACTTCAAGGCTGCACAGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCGTGCCAAGCAGATCTTAAAGATGCAGTCAGGATTTACCAAAAGTCAGTTGGATGTGCCAAAAGGACATGTAGCTATTTA
CGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCAATAACGTACCTAAACCATCCATCATTCCAACAACTTCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATC
GACAGGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTCGATTGCAAATAGAGCCATTGCATGGGTGGTTTGACAGTTCCCAGCAGAGGATT
TGCTTTGATCTCACTTCAAGGCTGCACAGTTCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQIEPLHGWFDSSQQRI
CFDLTSRLHSS