; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G217040 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G217040
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionU1-type domain-containing protein
Genome locationCiama_Chr11:30536082..30538734
RNA-Seq ExpressionCaUC11G217040
SyntenyCaUC11G217040
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR014898 - Zinc finger, C2H2, LYAR-type
IPR036236 - Zinc finger C2H2 superfamily
IPR039999 - Cell growth-regulating nucleolar protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10796.1 UBP1-associated proteins 1C [Cucumis melo var. makuwa]1.1e-15491.8Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA+SVTTPKS+KDSKQQPDFDILVGLSERPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHKAKARGFHAA KQSNQTEETVPD+K T  DTPKC E AENG++GAEKSQ+QLEAKSELGKLE ENG SHTK KRKRDAVDG
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
         STEKTRDDD SRGNGEVIQAT+AEIEPIKD+   SK LKEDLK KIKWKKLITSILKSN DGVLKLSKLRKLTLKSIRESGVTEDETKLI MLEQKINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRLAAKA
Subjt:  SSKFAVEKKYVRLAAKA

XP_004141064.1 UBP1-associated proteins 1C [Cucumis sativus]6.4e-15289.91Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA+SVTTPKS+KDSKQQPDFDILVGLSERPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHKAKARGFHAA KQSNQTEETVPD+K     TPKC EVA NG +GAEK Q+QLEAKSELGK E ENG SHTK KRKRDAVDG
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
         STEKT+DDD +RGNGEVIQATEAEIEPIKD+ R SK LKEDLK KIKWKKLITSILKSN DGVLKLSKLRKLTLKSIRESGVTEDETKLI ML+QKINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRL AKA
Subjt:  SSKFAVEKKYVRLAAKA

XP_008459586.1 PREDICTED: UBP1-associated proteins 1C [Cucumis melo]6.8e-15491.48Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA+SVTTPKS+KDSKQQPDFDILVGLSERPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHKAKARGFHAA KQSNQTEETVPD+K T  DTPKC E AENG++GAEKSQ+QLEAKSELGKLE ENG SHTK KRKRDAVDG
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
         STEKTRDDD SRGNGEVIQAT+AEIEPIKD+   SK LKEDLK KIKWKKLITSILKSN DGVLKLSKLRKLTLKSIRESGVTEDETKLI MLE KINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRLAAKA
Subjt:  SSKFAVEKKYVRLAAKA

XP_023538491.1 UBP1-associated proteins 1C [Cucurbita pepo subsp. pepo]3.2e-14385.49Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA++VTTPKS+KDSKQQPDFDILVGLS RPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHK KARGFHAANKQSNQTEE V DK   V++TPK  EV ENG++G+EKS++QL+A++ELG LE+ENGTSHTK KRK   +D 
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
        GSTEKT+DDD +RGNGEVIQAT+AEI+PIKD+I VSKSLKE   KKIKWKKLITSILKS+ DGVLK+SKLRKLTLKSIRESGVT DETKL+EMLEQKINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRLAAKA
Subjt:  SSKFAVEKKYVRLAAKA

XP_038889444.1 UBP1-associated proteins 1C [Benincasa hispida]7.8e-15892.74Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA+SVTTPKS+KDSKQQPDFDILVGLSERPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHKAKARGFHAA KQSNQ EETVPDKK T DDTPKC EVAENG++GAEK+Q+QLEAKSELGKLE ENG S TK KRKRDAVDG
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
        GSTEKTRDDD SRGNGEVIQATEAEIEPIKD++RVSKSLKE L KKIKWKKLITSILKSN DGVLKLSKLRKL LKSIRESGVTEDETKLIEMLEQKINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRLA+KA
Subjt:  SSKFAVEKKYVRLAAKA

TrEMBL top hitse value%identityAlignment
A0A0A0LET8 U1-type domain-containing protein3.1e-15289.91Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA+SVTTPKS+KDSKQQPDFDILVGLSERPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHKAKARGFHAA KQSNQTEETVPD+K     TPKC EVA NG +GAEK Q+QLEAKSELGK E ENG SHTK KRKRDAVDG
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
         STEKT+DDD +RGNGEVIQATEAEIEPIKD+ R SK LKEDLK KIKWKKLITSILKSN DGVLKLSKLRKLTLKSIRESGVTEDETKLI ML+QKINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRL AKA
Subjt:  SSKFAVEKKYVRLAAKA

A0A1S3CAI8 UBP1-associated proteins 1C3.3e-15491.48Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA+SVTTPKS+KDSKQQPDFDILVGLSERPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHKAKARGFHAA KQSNQTEETVPD+K T  DTPKC E AENG++GAEKSQ+QLEAKSELGKLE ENG SHTK KRKRDAVDG
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
         STEKTRDDD SRGNGEVIQAT+AEIEPIKD+   SK LKEDLK KIKWKKLITSILKSN DGVLKLSKLRKLTLKSIRESGVTEDETKLI MLE KINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRLAAKA
Subjt:  SSKFAVEKKYVRLAAKA

A0A5A7V1Q8 UBP1-associated proteins 1C3.3e-15491.48Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA+SVTTPKS+KDSKQQPDFDILVGLSERPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHKAKARGFHAA KQSNQTEETVPD+K T  DTPKC E AENG++GAEKSQ+QLEAKSELGKLE ENG SHTK KRKRDAVDG
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
         STEKTRDDD SRGNGEVIQAT+AEIEPIKD+   SK LKEDLK KIKWKKLITSILKSN DGVLKLSKLRKLTLKSIRESGVTEDETKLI MLE KINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRLAAKA
Subjt:  SSKFAVEKKYVRLAAKA

A0A5D3CK37 UBP1-associated proteins 1C5.1e-15591.8Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA+SVTTPKS+KDSKQQPDFDILVGLSERPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHKAKARGFHAA KQSNQTEETVPD+K T  DTPKC E AENG++GAEKSQ+QLEAKSELGKLE ENG SHTK KRKRDAVDG
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
         STEKTRDDD SRGNGEVIQAT+AEIEPIKD+   SK LKEDLK KIKWKKLITSILKSN DGVLKLSKLRKLTLKSIRESGVTEDETKLI MLEQKINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRLAAKA
Subjt:  SSKFAVEKKYVRLAAKA

A0A6J1FC25 UBP1-associated proteins 1C1.3e-14285.17Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAA++VTTPKS+KDSKQQPDFDILVGLS RPPWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG
        NTKATSKQTLLLHAEGKKHK KARGFHAANKQSNQ E+ V DK   V++TPK  EV ENG++GAEKS++QL+A+SELG LE+ENGTSHTK KRK   +D 
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDG

Query:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS
        GSTEKT+DDD +RGNGEVIQAT+AEI+PIKD+I VSKSLKE   KKIKWKKLITSILKS+ DGVLK+SKLRKLTLKSI ESGVT DETKL+EMLEQKINS
Subjt:  GSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINS

Query:  SSKFAVEKKYVRLAAKA
        SSKFAVEKKYVRLAAKA
Subjt:  SSKFAVEKKYVRLAAKA

SwissProt top hitse value%identityAlignment
O64571 UBP1-associated proteins 1C1.6e-3636.05Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGP-----------------------------------------
        MVWFQC+DCG+NLKKP+LP H   C+ATK SCIDCG  FGQ SV  H QCITEAEKYGP                                         
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGP-----------------------------------------

Query:  -------KGQGAAVSVTT----------PKSDKDS-KQQPDFDILVGLSERPPWFCSLCNTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVP
               K Q  A  V            P  DK++  QQPD DI VGLS   PWFCSLC+  ATS+QTLL HA GKKH+ K   F A  ++   T+ +  
Subjt:  -------KGQGAAVSVTT----------PKSDKDS-KQQPDFDILVGLSERPPWFCSLCNTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVP

Query:  DKKRTVDDTPKCGEVAENGNIGAEK------SQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDGGSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRV
        DKK    D  K  ++  + N+G         S   ++A  +   L   NG  H +N    DA      EKT  D +       + A++   E  K D+ V
Subjt:  DKKRTVDDTPKCGEVAENGNIGAEK------SQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDGGSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRV

Query:  SKSLKEDLKKKIKWKKLIT
        S  +     +  K +KL T
Subjt:  SKSLKEDLKKKIKWKKLIT

O94311 UPF0743 protein C215.06c2.2e-0947.37Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKY
        MV F CE C D +KKPKL  H   C     +CIDC  TF +   + HT C+TEA++Y
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKY

Q08288 Cell growth-regulating nucleolar protein9.7e-1037.89Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTC-SATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDK-DSKQQPDFDILVGLSERP
        MV+F C  CG+++KK ++  H   C +   LSCIDCG+ F  +  + H +CI+E +KYG KG  A       K+ K D+KQQ     +  L ++P
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTC-SATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDK-DSKQQPDFDILVGLSERP

Q6AYK5 Cell growth-regulating nucleolar protein5.5e-0525.19Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTC-SATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDK-DSKQQPDFDILVGLSERP-----
        MV+F C  CG+++KK ++  H   C +   LSCIDCG+ F  +  + H +CI+E +KYG KG  A       K+ K D KQQ     +  L ++P     
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTC-SATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDK-DSKQQPDFDILVGLSERP-----

Query:  --------PWFCSLCNTKAT----SKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLE
                  F ++   KA      + +L +H++    +       AA+ + +Q   +   K  T   T K      NG      ++ Q EAK    + +
Subjt:  --------PWFCSLCNTKAT----SKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLE

Query:  AENGTSHTKNKRK------RDAVDGGSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKE
         E   S  K K++      ++ + G   +K +    +        A EA   P K   R +++ +E
Subjt:  AENGTSHTKNKRK------RDAVDGGSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKE

Q9NX58 Cell growth-regulating nucleolar protein1.2e-0726.03Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTC-SATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDK-DSKQQPDFDILVGLSERP-----
        MV+F C  CG+++KK ++  H   C +   LSCIDCG+ F  +  + H +CI+E +KYG KG          K+ K D KQQ     +  L +RP     
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTC-SATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDK-DSKQQPDFDILVGLSERP-----

Query:  --------PWFCSLCNTKAT----SKQTLLLHAEGKKHK-----AKARGFHAANKQSNQTE-----------ETVPDKKRTVDDTPKCGEVAENGNIGAE
                  F ++   KA      K +L +H E    +     ++A      NK+ +Q              T     +  D   + GEV +N     E
Subjt:  --------PWFCSLCNTKAT----SKQTLLLHAEGKKHK-----AKARGFHAANKQSNQTE-----------ETVPDKKRTVDDTPKCGEVAENGNIGAE

Query:  K--------------------SQNQLEAKSELGK---LEA-------ENGTSHTKNKRKRDAVDGGSTEKTR--DDDRSRGNGEVIQATEAEIEPIKDDI
        +                    S+NQ   K + G+   LEA        NG++  ++K+K+   D  S E+       R R + EV   T+++ + +K   
Subjt:  K--------------------SQNQLEAKSELGK---LEA-------ENGTSHTKNKRKRDAVDGGSTEKTR--DDDRSRGNGEVIQATEAEIEPIKDDI

Query:  RVSKSLKED----LKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTED----ETKLIEMLEQKINSSSKFAVEKKYVRL
               ED     K K  WK  I +ILK   D  + + KLRK  L       VT++    E +L+ +  +KI+ +  F + K  V+L
Subjt:  RVSKSLKED----LKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTED----ETKLIEMLEQKINSSSKFAVEKKYVRL

Arabidopsis top hitse value%identityAlignment
AT2G19380.1 RNA recognition motif (RRM)-containing protein1.1e-3736.05Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGP-----------------------------------------
        MVWFQC+DCG+NLKKP+LP H   C+ATK SCIDCG  FGQ SV  H QCITEAEKYGP                                         
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGP-----------------------------------------

Query:  -------KGQGAAVSVTT----------PKSDKDS-KQQPDFDILVGLSERPPWFCSLCNTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVP
               K Q  A  V            P  DK++  QQPD DI VGLS   PWFCSLC+  ATS+QTLL HA GKKH+ K   F A  ++   T+ +  
Subjt:  -------KGQGAAVSVTT----------PKSDKDS-KQQPDFDILVGLSERPPWFCSLCNTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVP

Query:  DKKRTVDDTPKCGEVAENGNIGAEK------SQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDGGSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRV
        DKK    D  K  ++  + N+G         S   ++A  +   L   NG  H +N    DA      EKT  D +       + A++   E  K D+ V
Subjt:  DKKRTVDDTPKCGEVAENGNIGAEK------SQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDGGSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRV

Query:  SKSLKEDLKKKIKWKKLIT
        S  +     +  K +KL T
Subjt:  SKSLKEDLKKKIKWKKLIT

AT2G19385.1 zinc ion binding6.3e-7349.53Show/hide
Query:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC
        MVWFQCEDCG++LKKPK+P+HF+ C A KLSCIDCG+ FG+++VQGH QCITEAEKYGPKGQ  + + T  K    SKQ+PDFDI VGLS R PWFCSLC
Subjt:  MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLC

Query:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAEN-GNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVD
        NTKATS+QTLL HA+GKKH+ KA+ FHA  +Q   T         T+D+     + +EN  N+ +E+ +  L A S +      NG SH + KRK + +D
Subjt:  NTKATSKQTLLLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAEN-GNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVD

Query:  GGSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKIN
             +T + + ++G+                   + K+ K+D +KKI WKKLITS LKSN D  LK+ KL+KL L+SI +SG   D+++L   LE K+N
Subjt:  GGSTEKTRDDDRSRGNGEVIQATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKIN

Query:  SSSKFAVEKKYVRLAAK
         SS+F V+ KYV+L AK
Subjt:  SSSKFAVEKKYVRLAAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGGTTTCAGTGCGAGGATTGCGGAGATAACCTCAAGAAACCCAAGCTCCCAAATCACTTCAGAACTTGTTCCGCCACCAAGTTGTCTTGCATCGATTGTGGACA
AACCTTTGGGCAGGAAAGCGTTCAAGGCCATACTCAATGTATCACAGAAGCGGAAAAATATGGTCCCAAGGGGCAAGGAGCAGCCGTGAGTGTCACCACTCCCAAGTCCG
ACAAGGATTCAAAACAGCAACCTGATTTTGATATCCTTGTTGGATTGTCCGAGCGCCCTCCTTGGTTCTGCAGTCTTTGCAATACCAAGGCAACTAGTAAACAGACTTTG
CTGCTTCATGCAGAAGGAAAGAAGCACAAAGCAAAAGCCCGTGGGTTTCATGCAGCGAATAAACAATCTAATCAAACGGAGGAAACTGTTCCAGATAAAAAGCGTACGGT
TGATGACACTCCCAAATGTGGTGAAGTAGCCGAAAATGGGAATATCGGGGCAGAAAAATCGCAAAATCAGCTTGAAGCCAAAAGTGAACTTGGAAAGTTGGAAGCAGAAA
ATGGTACTTCACACACAAAGAATAAGAGGAAACGAGATGCTGTGGATGGTGGTTCGACAGAAAAGACGAGAGATGATGATCGAAGTAGAGGTAATGGGGAGGTTATCCAG
GCAACCGAAGCTGAGATTGAGCCTATAAAGGATGACATCAGAGTGTCAAAATCTCTGAAAGAAGATTTGAAAAAGAAGATTAAGTGGAAAAAGCTGATAACATCAATTTT
GAAATCTAATTCTGATGGTGTTCTTAAGTTGTCGAAACTAAGAAAACTTACCCTCAAGTCTATTCGCGAATCCGGTGTCACAGAAGATGAAACCAAACTTATTGAGATGC
TCGAGCAAAAGATCAATTCAAGTTCAAAATTTGCTGTTGAGAAGAAATATGTTCGGCTGGCAGCTAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAGCCAAATTAAAAACCCTAGACGTAACTCGTCTTCTTTGCTTCTCGCTACGCTACCCGTCTCTCAAAAATCACAGTCCGCCATTGTTACTACAAGCTTGGTACAG
TAGAGATGGTGTGGTTTCAGTGCGAGGATTGCGGAGATAACCTCAAGAAACCCAAGCTCCCAAATCACTTCAGAACTTGTTCCGCCACCAAGTTGTCTTGCATCGATTGT
GGACAAACCTTTGGGCAGGAAAGCGTTCAAGGCCATACTCAATGTATCACAGAAGCGGAAAAATATGGTCCCAAGGGGCAAGGAGCAGCCGTGAGTGTCACCACTCCCAA
GTCCGACAAGGATTCAAAACAGCAACCTGATTTTGATATCCTTGTTGGATTGTCCGAGCGCCCTCCTTGGTTCTGCAGTCTTTGCAATACCAAGGCAACTAGTAAACAGA
CTTTGCTGCTTCATGCAGAAGGAAAGAAGCACAAAGCAAAAGCCCGTGGGTTTCATGCAGCGAATAAACAATCTAATCAAACGGAGGAAACTGTTCCAGATAAAAAGCGT
ACGGTTGATGACACTCCCAAATGTGGTGAAGTAGCCGAAAATGGGAATATCGGGGCAGAAAAATCGCAAAATCAGCTTGAAGCCAAAAGTGAACTTGGAAAGTTGGAAGC
AGAAAATGGTACTTCACACACAAAGAATAAGAGGAAACGAGATGCTGTGGATGGTGGTTCGACAGAAAAGACGAGAGATGATGATCGAAGTAGAGGTAATGGGGAGGTTA
TCCAGGCAACCGAAGCTGAGATTGAGCCTATAAAGGATGACATCAGAGTGTCAAAATCTCTGAAAGAAGATTTGAAAAAGAAGATTAAGTGGAAAAAGCTGATAACATCA
ATTTTGAAATCTAATTCTGATGGTGTTCTTAAGTTGTCGAAACTAAGAAAACTTACCCTCAAGTCTATTCGCGAATCCGGTGTCACAGAAGATGAAACCAAACTTATTGA
GATGCTCGAGCAAAAGATCAATTCAAGTTCAAAATTTGCTGTTGAGAAGAAATATGTTCGGCTGGCAGCTAAAGCTTGAGCTAAGCACCATTTCTATAGCATTGCAAATC
AGATTTTGCGCCAATTGTCTAGTGAGTTTTAGACGATTACAAGATTGCTTAATTTGAGGTGTAGATGATTGATTTTCTCAAAGCTGAGTTAATACAAGATTTTTATTGAG
TTGGGGTACAATCTACAACATTCATAGGATTATATGTTATGGGAAGAGACAGTATTATTATTGTGGTGTTAACTGAACCGAGTCCCCACTAGGTTGCTGCAATCCATTCA
ATGAAAAGAGAAAAAAGCAGGGATAATGAATATTGATCTTGTATAATTTCGTTCAGCCTGGAACCAGTGGGTCCTTTGTCTTCCTACTCTGTTATAACATTATTATTATT
CCTAAAGAAGGATGAATTGCTTATTTTT
Protein sequenceShow/hide protein sequence
MVWFQCEDCGDNLKKPKLPNHFRTCSATKLSCIDCGQTFGQESVQGHTQCITEAEKYGPKGQGAAVSVTTPKSDKDSKQQPDFDILVGLSERPPWFCSLCNTKATSKQTL
LLHAEGKKHKAKARGFHAANKQSNQTEETVPDKKRTVDDTPKCGEVAENGNIGAEKSQNQLEAKSELGKLEAENGTSHTKNKRKRDAVDGGSTEKTRDDDRSRGNGEVIQ
ATEAEIEPIKDDIRVSKSLKEDLKKKIKWKKLITSILKSNSDGVLKLSKLRKLTLKSIRESGVTEDETKLIEMLEQKINSSSKFAVEKKYVRLAAKA